FFCP PHASE1:Mm9::chr4:137549360..137549389,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230861 | |EntrezGene=230861 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=376 | |||
|TSSclassifier=NA | |||
|UniProt=Q80XI3,Q8BQR8,A2AMI6,A2AMI2 | |UniProt=Q80XI3,Q8BQR8,A2AMI6,A2AMI2 | ||
|association_with_transcript=0bp_to_ENSMUST00000084214,NM_172703,uc008vjw.1,uc008vjx.1,uc008vjy.1,uc008vjz.1,uc008vka.1,uc008vkb.1,uc008vkc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000084214,NM_172703,uc008vjw.1,uc008vjx.1,uc008vjy.1,uc008vjz.1,uc008vka.1,uc008vkb.1,uc008vkc.1_5end | ||
|cluster_id=chr4:137549360..137549389,+ | |||
|description=CAGE_peak_1_at_Eif4g3_5end | |description=CAGE_peak_1_at_Eif4g3_5end | ||
|id=chr4:137549360..137549389,+ | |id=chr4:137549360..137549389,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.27e-12!102;UBERON:0000924!1.27e-12!102;UBERON:0006601!1.27e-12!102;UBERON:0001017!2.62e-12!73;UBERON:0005743!2.62e-12!73;UBERON:0000073!1.82e-11!75;UBERON:0001016!1.82e-11!75;UBERON:0002346!5.11e-10!71;UBERON:0003075!5.11e-10!71;UBERON:0007284!5.11e-10!71;UBERON:0000153!5.95e-10!94;UBERON:0000955!7.30e-10!50;UBERON:0006238!7.30e-10!50;UBERON:0000033!9.68e-10!63;UBERON:0002616!2.32e-09!49;UBERON:0001049!2.43e-09!52;UBERON:0005068!2.43e-09!52;UBERON:0006241!2.43e-09!52;UBERON:0007135!2.43e-09!52;UBERON:0007811!1.18e-08!86;UBERON:0003056!2.33e-08!49;UBERON:0002020!3.09e-08!34;UBERON:0002791!8.87e-08!29;UBERON:0003528!8.87e-08!29;UBERON:0001893!8.87e-08!29;UBERON:0003080!1.23e-07!40;UBERON:0002021!2.38e-07!10;UBERON:0000411!2.38e-07!10;UBERON:0001950!2.38e-07!10;UBERON:0002780!3.70e-07!39;UBERON:0001890!3.70e-07!39;UBERON:0006240!3.70e-07!39 | |ontology_enrichment_uberon=UBERON:0004121!1.27e-12!102;UBERON:0000924!1.27e-12!102;UBERON:0006601!1.27e-12!102;UBERON:0001017!2.62e-12!73;UBERON:0005743!2.62e-12!73;UBERON:0000073!1.82e-11!75;UBERON:0001016!1.82e-11!75;UBERON:0002346!5.11e-10!71;UBERON:0003075!5.11e-10!71;UBERON:0007284!5.11e-10!71;UBERON:0000153!5.95e-10!94;UBERON:0000955!7.30e-10!50;UBERON:0006238!7.30e-10!50;UBERON:0000033!9.68e-10!63;UBERON:0002616!2.32e-09!49;UBERON:0001049!2.43e-09!52;UBERON:0005068!2.43e-09!52;UBERON:0006241!2.43e-09!52;UBERON:0007135!2.43e-09!52;UBERON:0007811!1.18e-08!86;UBERON:0003056!2.33e-08!49;UBERON:0002020!3.09e-08!34;UBERON:0002791!8.87e-08!29;UBERON:0003528!8.87e-08!29;UBERON:0001893!8.87e-08!29;UBERON:0003080!1.23e-07!40;UBERON:0002021!2.38e-07!10;UBERON:0000411!2.38e-07!10;UBERON:0001950!2.38e-07!10;UBERON:0002780!3.70e-07!39;UBERON:0001890!3.70e-07!39;UBERON:0006240!3.70e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.14e-13,95;UBERON:0000924,3.14e-13,95;UBERON:0006601,3.14e-13,95;UBERON:0001017,2.62e-12,73;UBERON:0001016,1.82e-11,75;UBERON:0002346,8.12e-11,64;UBERON:0003075,8.12e-11,64;UBERON:0007284,8.12e-11,64;UBERON:0010371,1.15e-10,73;UBERON:0000073,6.08e-10,54;UBERON:0001049,2.43e-09,52;UBERON:0005068,2.43e-09,52;UBERON:0006241,2.43e-09,52;UBERON:0007135,2.43e-09,52;UBERON:0000955,8.71e-09,47;UBERON:0006238,8.71e-09,47;UBERON:0003056,2.33e-08,49;UBERON:0002616,2.66e-08,46;UBERON:0002020,3.09e-08,34;UBERON:0003528,8.87e-08,29;UBERON:0002791,8.87e-08,29;UBERON:0001893,8.87e-08,29;UBERON:0003080,1.23e-07,40;UBERON:0002021,2.38e-07,10;UBERON:0000411,2.38e-07,10;UBERON:0001950,2.38e-07,10;UBERON:0002780,3.70e-07,39;UBERON:0001890,3.70e-07,39;UBERON:0006240,3.70e-07,39 | |||
|phase1_expression=45.4822725777615,36.6424178021329,33.6699437148257,24.4996011158532,29.5528480668345,39.1158703554703,43.6855637913633,75.5371442133221,66.73385429989,69.5171643176321,93.4850106511257,115.749402702233,82.0051496370475,75.2689664827568,45.6360373687458,49.6064405105074,44.0723983220732,97.6355401783746,97.625476727286,88.2730475739903,128.245281547813,37.8298524075373,42.3143658405075,34.8783481689627,30.5114343819336,18.3754228516806,25.4149577733854,29.088616412595,18.812318526181,19.1542898617547,21.7295900442199,40.0069324279568,34.4436281047359,79.2408405077194,8.37669697278696,11.802659820453,13.0668388007916,71.9874404867481,40.6294379152376,40.3113282859825,73.5289360038768,80.5993672250966,57.7757320107073,38.2726326645755,36.0901875141472,34.1396959020728,57.8969594817549,34.2299495517301,45.0356674605667,46.0798860806052,43.8157499687385,46.0008205967909,61.2406512110738,87.0434570413613,119.98548629386,63.028561828807,59.0258886273839,57.2396022427961,99.5396987429221,100.508286061686,67.8199601751612,29.8183188220836,38.239676232779,58.4934816232909,72.1872444673891,51.1545682761192,61.418022656273,49.5641613864805,86.2697574406534,76.1433492190735,71.0898369367671,69.6988401945281,61.4014543845486,75.3318415171967,69.7755029012761,70.7798465689716,106.812404569407,98.4469376636797,88.32375662234,100.365464962678,82.4303668857711,85.4297927713086,82.079801706406,64.1549375436115,71.2039834639935,93.3972615951527,85.4230084794618,95.9957146000298,47.5560494132396,50.8596599518667,83.7708372347849,35.2773789562368,33.9985666853875,36.1601138397337,56.5305483179472,47.0428231452202,59.6888785559945,17.8951838706961,15.846946280775,16.9602995764963,48.1684495636247,12.8326477414318,22.9324715735981,28.4426681261332,23.3810324292111,22.8023878927589,19.7154533555765,65.0848114398642,137.237078333001,84.6120192669501,54.8213632580989,69.4181290551682,57.1926433195025,55.0137638017072,77.9613128309723,61.7022963428707,84.5406789651559,52.6341659188478,99.9609923703358,68.9126780775963,70.4484443888655,63.5186581607141,48.4618579167118,151.953233648993,135.512019308305,40.1067576677488,28.8754450059268,18.5969846607956,24.3974835980284,127.322043494099,108.427642868014,101.654370859307,130.5420644644,117.629110371952,116.984669087032,91.8285548963508,66.8066226858075,64.8160316878585,50.7972744451686,74.4964169838118,72.6072071731887,46.9000293044285,69.5039821048648,73.8453607395004,99.197215762636,93.3949020876555,76.0858003424998,106.068382002996,88.5984450953982,111.572587299013,98.5326295318114,59.1828477554452,73.960568294009,71.3916941370441,64.4098086956863,65.4822737832843,18.2575428701441,19.3010930336036,31.2579849335152,65.4517441212186,66.3708749746502,51.6778116393113,75.5215706516821,50.174879095588,49.8282774626232,42.5537118893246,46.4112984421341,41.5684618827123,42.9501208274184,51.8769186489941,64.6929100175929,52.1933955108436,53.5702281310164,51.1326455477016,104.724394384935,86.3369697862196,32.711459515396,49.9811570994099,69.5319696744863,75.0124450109216,81.8308379395293,73.8161700121434,62.9329864080983,56.3067853293175,44.6057317851841,40.1865449526587,53.5343994744574,54.3151168672342,51.4705189994477,44.0421510240569,46.2535426731846,41.4213848369084,66.9527690364378,70.1485867423735,113.834813029811,80.6459258267444,78.744709790056,84.7240704275048,84.4207770608835,81.4808016847404,86.5062990405975,78.6039934181869,33.4991468608478,53.223588723434,51.4984567196592,40.4751802292737,47.2664082835212,46.0648375127116,36.1568709529616,59.265404314867,88.5258338191693,46.4008788287858,171.084165767552,64.3803839466511,56.4788188337355,54.5570376365761,44.4905585534342,35.2183770595258,87.7577653291372,54.9525094134406,78.7120836214985,61.4477210506181,53.9787571063555,88.1082914143951,85.6957107189649,88.3955424795829,95.5268973283517,95.6727459282708,98.0646827243546,69.6419087541886,90.1415605339975,99.6632013626615,58.8086007363162,53.8466626980522,101.303440241921,90.2313160416475,103.715681132114,85.0956844659395,20.4918681720844,90.3845919391655,76.0374808793179,78.4781876036243,106.850005275468,91.0471120199223,104.715376818725,115.212148031055,86.2246794567525,98.7824799740234,97.2407933748448,121.459457607443,96.5192579416227,52.7074186855075,76.8826448148879,98.9820737835213,65.0451177865818,44.6716370525166,28.4184143546866,39.6070667487386,56.6979634331084,45.8078370436452,59.1800791355226,46.8958511025982,45.988161811629,60.9950942816125,42.1674434299995,57.7559042189846,88.5142974959849,63.5615661930525,61.5747334805911,55.0846180031192,81.2218270081613,63.8560367015413,62.3640788082038,48.4099269092213,54.4438362707808,36.4351161885771,75.8617689309069,106.021860641372,95.5869406039761,67.5504759195346,51.568852609355,59.0907239082221,47.5113763706657,115.890813756569,81.6762810213736,70.7906957113853,63.3365283604414,51.6129572192853,74.0882714247956,68.4046737887503,41.9846722084823,34.2881058192962,42.2891919841537,41.0508365746499,76.7114784434253,73.1950081656655,57.7828573396637,60.217429252167,48.0397640241591,55.2943820177765,61.9074383382766,43.1897304273649,56.3825133819299,85.1234858929088,452.645429763405,71.6184255550658,48.9757131753009,60.6687707633429,42.3644221006958,58.1209071688277,60.086906186626,53.1233890163316,42.4680344924129,169.833636940682,250.874135450601,116.924114632426,46.2213490861574,52.9988538970509,58.2045286940522,63.9125303532909,67.7503419804113,62.7420246494237,75.1739693318598,59.5702054694071,76.0543930416898,68.7634582633252,97.6527965012319,75.7187193709393,88.0083073427214,63.7112377958744,29.0801598920025,14.5336447707351,20.9855770455098,68.7754954754598,98.3456171364194,91.5758121336325,77.3869848475428,104.326997639356,157.565764090162,135.33561953311,159.837848249592,102.252643494494,115.093863321468,138.992477119705,115.428847539639,118.884797651194,111.473032610114,138.242003237736,64.7633048925262,128.885034108533,77.5130570123769,75.6061890082394,55.9667144216713,61.7714188392047,76.230627635954,84.4743734679466,111.35896572836,81.6211993997066,95.0547374588399,91.483775572247,79.7825643643398,91.7480433961777,86.727558122976,73.8255221488764,86.2179385029725,74.8487775399176,83.2413519622679,73.1578633067955,74.0597585152497,65.3110966666362,67.7158779450392,72.6732083161643,74.1581917672805,69.8070515106331,67.8662779357986,64.9782187251472,63.2847170521716,68.4593571422441,68.096500403276,71.4157497222835,70.7969704683563,68.7919574865689,87.5796013854382,75.4427945372597,71.583072184295,88.7417453219472,80.3410994689142,71.471619794723,72.1108968779511 | |phase1_expression=45.4822725777615,36.6424178021329,33.6699437148257,24.4996011158532,29.5528480668345,39.1158703554703,43.6855637913633,75.5371442133221,66.73385429989,69.5171643176321,93.4850106511257,115.749402702233,82.0051496370475,75.2689664827568,45.6360373687458,49.6064405105074,44.0723983220732,97.6355401783746,97.625476727286,88.2730475739903,128.245281547813,37.8298524075373,42.3143658405075,34.8783481689627,30.5114343819336,18.3754228516806,25.4149577733854,29.088616412595,18.812318526181,19.1542898617547,21.7295900442199,40.0069324279568,34.4436281047359,79.2408405077194,8.37669697278696,11.802659820453,13.0668388007916,71.9874404867481,40.6294379152376,40.3113282859825,73.5289360038768,80.5993672250966,57.7757320107073,38.2726326645755,36.0901875141472,34.1396959020728,57.8969594817549,34.2299495517301,45.0356674605667,46.0798860806052,43.8157499687385,46.0008205967909,61.2406512110738,87.0434570413613,119.98548629386,63.028561828807,59.0258886273839,57.2396022427961,99.5396987429221,100.508286061686,67.8199601751612,29.8183188220836,38.239676232779,58.4934816232909,72.1872444673891,51.1545682761192,61.418022656273,49.5641613864805,86.2697574406534,76.1433492190735,71.0898369367671,69.6988401945281,61.4014543845486,75.3318415171967,69.7755029012761,70.7798465689716,106.812404569407,98.4469376636797,88.32375662234,100.365464962678,82.4303668857711,85.4297927713086,82.079801706406,64.1549375436115,71.2039834639935,93.3972615951527,85.4230084794618,95.9957146000298,47.5560494132396,50.8596599518667,83.7708372347849,35.2773789562368,33.9985666853875,36.1601138397337,56.5305483179472,47.0428231452202,59.6888785559945,17.8951838706961,15.846946280775,16.9602995764963,48.1684495636247,12.8326477414318,22.9324715735981,28.4426681261332,23.3810324292111,22.8023878927589,19.7154533555765,65.0848114398642,137.237078333001,84.6120192669501,54.8213632580989,69.4181290551682,57.1926433195025,55.0137638017072,77.9613128309723,61.7022963428707,84.5406789651559,52.6341659188478,99.9609923703358,68.9126780775963,70.4484443888655,63.5186581607141,48.4618579167118,151.953233648993,135.512019308305,40.1067576677488,28.8754450059268,18.5969846607956,24.3974835980284,127.322043494099,108.427642868014,101.654370859307,130.5420644644,117.629110371952,116.984669087032,91.8285548963508,66.8066226858075,64.8160316878585,50.7972744451686,74.4964169838118,72.6072071731887,46.9000293044285,69.5039821048648,73.8453607395004,99.197215762636,93.3949020876555,76.0858003424998,106.068382002996,88.5984450953982,111.572587299013,98.5326295318114,59.1828477554452,73.960568294009,71.3916941370441,64.4098086956863,65.4822737832843,18.2575428701441,19.3010930336036,31.2579849335152,65.4517441212186,66.3708749746502,51.6778116393113,75.5215706516821,50.174879095588,49.8282774626232,42.5537118893246,46.4112984421341,41.5684618827123,42.9501208274184,51.8769186489941,64.6929100175929,52.1933955108436,53.5702281310164,51.1326455477016,104.724394384935,86.3369697862196,32.711459515396,49.9811570994099,69.5319696744863,75.0124450109216,81.8308379395293,73.8161700121434,62.9329864080983,56.3067853293175,44.6057317851841,40.1865449526587,53.5343994744574,54.3151168672342,51.4705189994477,44.0421510240569,46.2535426731846,41.4213848369084,66.9527690364378,70.1485867423735,113.834813029811,80.6459258267444,78.744709790056,84.7240704275048,84.4207770608835,81.4808016847404,86.5062990405975,78.6039934181869,33.4991468608478,53.223588723434,51.4984567196592,40.4751802292737,47.2664082835212,46.0648375127116,36.1568709529616,59.265404314867,88.5258338191693,46.4008788287858,171.084165767552,64.3803839466511,56.4788188337355,54.5570376365761,44.4905585534342,35.2183770595258,87.7577653291372,54.9525094134406,78.7120836214985,61.4477210506181,53.9787571063555,88.1082914143951,85.6957107189649,88.3955424795829,95.5268973283517,95.6727459282708,98.0646827243546,69.6419087541886,90.1415605339975,99.6632013626615,58.8086007363162,53.8466626980522,101.303440241921,90.2313160416475,103.715681132114,85.0956844659395,20.4918681720844,90.3845919391655,76.0374808793179,78.4781876036243,106.850005275468,91.0471120199223,104.715376818725,115.212148031055,86.2246794567525,98.7824799740234,97.2407933748448,121.459457607443,96.5192579416227,52.7074186855075,76.8826448148879,98.9820737835213,65.0451177865818,44.6716370525166,28.4184143546866,39.6070667487386,56.6979634331084,45.8078370436452,59.1800791355226,46.8958511025982,45.988161811629,60.9950942816125,42.1674434299995,57.7559042189846,88.5142974959849,63.5615661930525,61.5747334805911,55.0846180031192,81.2218270081613,63.8560367015413,62.3640788082038,48.4099269092213,54.4438362707808,36.4351161885771,75.8617689309069,106.021860641372,95.5869406039761,67.5504759195346,51.568852609355,59.0907239082221,47.5113763706657,115.890813756569,81.6762810213736,70.7906957113853,63.3365283604414,51.6129572192853,74.0882714247956,68.4046737887503,41.9846722084823,34.2881058192962,42.2891919841537,41.0508365746499,76.7114784434253,73.1950081656655,57.7828573396637,60.217429252167,48.0397640241591,55.2943820177765,61.9074383382766,43.1897304273649,56.3825133819299,85.1234858929088,452.645429763405,71.6184255550658,48.9757131753009,60.6687707633429,42.3644221006958,58.1209071688277,60.086906186626,53.1233890163316,42.4680344924129,169.833636940682,250.874135450601,116.924114632426,46.2213490861574,52.9988538970509,58.2045286940522,63.9125303532909,67.7503419804113,62.7420246494237,75.1739693318598,59.5702054694071,76.0543930416898,68.7634582633252,97.6527965012319,75.7187193709393,88.0083073427214,63.7112377958744,29.0801598920025,14.5336447707351,20.9855770455098,68.7754954754598,98.3456171364194,91.5758121336325,77.3869848475428,104.326997639356,157.565764090162,135.33561953311,159.837848249592,102.252643494494,115.093863321468,138.992477119705,115.428847539639,118.884797651194,111.473032610114,138.242003237736,64.7633048925262,128.885034108533,77.5130570123769,75.6061890082394,55.9667144216713,61.7714188392047,76.230627635954,84.4743734679466,111.35896572836,81.6211993997066,95.0547374588399,91.483775572247,79.7825643643398,91.7480433961777,86.727558122976,73.8255221488764,86.2179385029725,74.8487775399176,83.2413519622679,73.1578633067955,74.0597585152497,65.3110966666362,67.7158779450392,72.6732083161643,74.1581917672805,69.8070515106331,67.8662779357986,64.9782187251472,63.2847170521716,68.4593571422441,68.096500403276,71.4157497222835,70.7969704683563,68.7919574865689,87.5796013854382,75.4427945372597,71.583072184295,88.7417453219472,80.3410994689142,71.471619794723,72.1108968779511 | ||
|short_description=p1@Eif4g3 | |short_description=p1@Eif4g3 | ||
}} | }} |
Latest revision as of 13:58, 26 September 2015
Short description: | p1@Eif4g3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Eif4g3_5end |
Coexpression cluster: | MCL_coexpression_mm9:376 |
Association with transcript: | 0bp_to_ENSMUST00000084214, NM_172703, uc008vjw.1, uc008vjx.1, uc008vjy.1, uc008vjz.1, uc008vka.1, uc008vkb.1, uc008vkc.1_5end |
EntrezGene: | Eif4g3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.14e-13 | 95 |
ectoderm | 3.14e-13 | 95 |
presumptive ectoderm | 3.14e-13 | 95 |
central nervous system | 2.62e-12 | 73 |
nervous system | 1.82e-11 | 75 |
neurectoderm | 8.12e-11 | 64 |
neural plate | 8.12e-11 | 64 |
presumptive neural plate | 8.12e-11 | 64 |
ecto-epithelium | 1.15e-10 | 73 |
regional part of nervous system | 6.08e-10 | 54 |
neural tube | 2.43e-09 | 52 |
neural rod | 2.43e-09 | 52 |
future spinal cord | 2.43e-09 | 52 |
neural keel | 2.43e-09 | 52 |
brain | 8.71e-09 | 47 |
future brain | 8.71e-09 | 47 |
pre-chordal neural plate | 2.33e-08 | 49 |
regional part of brain | 2.66e-08 | 46 |
gray matter | 3.09e-08 | 34 |
brain grey matter | 8.87e-08 | 29 |
regional part of telencephalon | 8.87e-08 | 29 |
telencephalon | 8.87e-08 | 29 |
anterior neural tube | 1.23e-07 | 40 |
occipital lobe | 2.38e-07 | 10 |
visual cortex | 2.38e-07 | 10 |
neocortex | 2.38e-07 | 10 |
regional part of forebrain | 3.70e-07 | 39 |
forebrain | 3.70e-07 | 39 |
future forebrain | 3.70e-07 | 39 |