FFCP PHASE1:Hg19::chr10:103893775..103893800,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:103893775..103893800,- | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_at_chr10:103893775..103893800,- | |description=CAGE_peak_at_chr10:103893775..103893800,- | ||
|id=chr10:103893775..103893800,- | |id=chr10:103893775..103893800,- | ||
|ontology_enrichment_celltype=CL:0000548!1.39e-16!679;CL:0000004!1.39e-16!679;CL:0000255!1.39e-16!679;CL:0000012!4.59e-16!682;CL:0000860!3.31e-13!45;CL:0002057!1.62e-12!42;CL:0000003!2.87e-11!722;CL:0002371!3.00e-10!591;CL:0000144!3.75e-10!625;CL:0000063!1.37e-08!578;CL:0002009!6.09e-08!65;CL:0002194!3.02e-07!63;CL:0000576!3.02e-07!63;CL:0000040!3.02e-07!63;CL:0000559!3.02e-07!63 | |ontology_enrichment_celltype=CL:0000548!1.39e-16!679;CL:0000004!1.39e-16!679;CL:0000255!1.39e-16!679;CL:0000012!4.59e-16!682;CL:0000860!3.31e-13!45;CL:0002057!1.62e-12!42;CL:0000003!2.87e-11!722;CL:0002371!3.00e-10!591;CL:0000144!3.75e-10!625;CL:0000063!1.37e-08!578;CL:0002009!6.09e-08!65;CL:0002194!3.02e-07!63;CL:0000576!3.02e-07!63;CL:0000040!3.02e-07!63;CL:0000559!3.02e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.48e-13;33!CL:0002057;2.48e-13;33!CL:0000473;1.64e-11;39!CL:0000234;1.64e-11;39!CL:0002595;2.44e-10;5!CL:0000359;1.16e-09;32!CL:0002521;3.06e-08;3!CL:0000307;5.81e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.56e-11,42;CL:0002057,4.56e-11,42;CL:0002595,3.82e-10,5;CL:0000473,1.86e-09,48;CL:0000234,1.86e-09,48;CL:0000359,2.66e-09,32;CL:0002009,1.70e-08,61;CL:0002521,3.19e-08,3;CL:0000068,8.58e-08,3;CL:0000069,8.58e-08,3;CL:0000307,8.58e-08,3;CL:0000377,8.58e-08,3;CL:0000557,1.45e-07,67;CL:0002194,3.30e-07,59;CL:0000576,3.30e-07,59;CL:0000040,3.30e-07,59;CL:0000559,3.30e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;4.78e-10;42!CL:0000377;5.81e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.08e-09!167;UBERON:0003081!1.41e-09!216;UBERON:0000926!2.54e-08!448;UBERON:0004120!2.54e-08!448;UBERON:0006603!2.54e-08!448;UBERON:0002371!1.44e-07!80;UBERON:0004765!1.90e-07!101;UBERON:0001434!1.90e-07!101;UBERON:0001637!2.68e-07!42;UBERON:0003509!2.68e-07!42;UBERON:0004572!2.68e-07!42;UBERON:0001474!3.16e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.44e-10;5!UBERON:0001533;2.44e-10;5!UBERON:0002072;2.68e-10;5!UBERON:0002190;3.06e-08;3!UBERON:0003513;1.65e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,3.82e-10,5;UBERON:0001533,3.82e-10,5;UBERON:0002072,4.20e-10,5;UBERON:0002204,2.46e-08,167;UBERON:0002190,3.19e-08,3;UBERON:0000926,4.08e-08,315;UBERON:0004120,4.08e-08,315;UBERON:0006603,4.08e-08,315;UBERON:0003081,7.11e-08,203;UBERON:0002371,9.41e-08,76;UBERON:0003513,2.27e-07,7;UBERON:0007503,2.48e-07,78;UBERON:0001474,5.01e-07,82;UBERON:0001637,8.29e-07,42;UBERON:0003509,8.29e-07,42;UBERON:0004572,8.29e-07,42 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,2.53299878168311,1.26343974685366,0,0.245733936501509,1.39560233594486,0,0.527533956456907,0.123766352960047,0.331397375727916,0,1.20538905604795,0.730310090387373,0,0.123121058076788,0,0,0,0.273748850145768,0,0.152826811495903,0.328402357799783,0,0,0,0.154816123316076,0,2.409647350226,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0.290796477559129,1.51150377475524,0.485168122375632,2.09186133215116,1.6446715520873,0.929119112685311,0.575384784644301,2.30544635876191,0.236482229888585,0.689491361473237,1.29096936716765,1.35426486594342,0.941211697713023,0.545812300115692,0.224723484445085,0.612167784741805,0,1.91801137739712,0,0.997318288108159,0.852449501065388,1.7412554317715,0,1.86846674698672,0.502497330513487,1.0429658368404,0.868755378820466,0,0.736555271975129,0.316462387440884,0.211255286311942,0,0.209658645508376,0.561643155732475,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0,0.361439152384566,0,0,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0,0.417989933073621,0,0,0,0,0.760272105718513,0.24406205754817,0.735326160691737,0,0,0.44905874525234,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0.624320153660641,1.1409436430889,0,0.352303495931295,0.161872944368132,0.561803226808994,0.204154171254893,0.368502951935304,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.877955241761676,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.635795703478686,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0.194874010322397,1.26216887122057,0,0,0,0.201504196455281,0,0.386521706326594,0.272746120590835,0.573609190778008,0.121973706129595,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0.354920400119532,0.505754070234305,0,0.220587945464788,0,0.474541238222193,0.539325232640658,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0.502644862058154,0.370353780634118,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0.503946384596579,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,1.690605505112,0,0,0.771622122786426,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0,0,0.315404830067869,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0.604780586659361,0,0.460385919864187,0,0,0.511707249066704,0.160853921143607,0,1.07946785661859,0.710246901252508,0.492762936082855,0,0.929683027679674,0,0.601519410909855,0.368323955743585,0,0.364182336013434,0,0.451199612907412,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0.647747748306418,1.54227252690289,0.541892875087706,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0,0.307007349452259,0.413509717453592,0,0.145016693914229,0.170453254832202,0.178064071293475,0.495854746082934,0,0.638063562472921,0.10115778085555,0.929691098594572,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0.511795582622668,0,0,1.56989728039846,0,0,0.235624804691373,0.808729926293264,1.58510321173008,0.421258456238981,0,0.487426979262569,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0,3.3171948762061,1.31535265576129,0,0,0.608731130888112,0.92947049429925,1.12678241012897,0.143411352204052,0,0.35667105148125,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,1.34060455107157,1.08890984861323,0,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0.211673582723883,0.649243880549111,0,0,0.156679895773023,0,0,0.481764225311099,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0.586164286206121,0.278406173895242,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.614321404198464,0,0,0.111308705022906,0.659215496907038,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0,1.25481369850743,0,0,0,0,0,0,0.18319518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| ||
|short_description=p@chr10:103893775..103893800,- | |short_description=p@chr10:103893775..103893800,- | ||
}} | }} |
Latest revision as of 09:44, 23 July 2015
Short description: | p@chr10:103893775..103893800, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:103893775..103893800, - |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.56e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.56e-11 | 42 |
smooth muscle cell of the subclavian artery | 3.82e-10 | 5 |
defensive cell | 1.86e-09 | 48 |
phagocyte | 1.86e-09 | 48 |
vascular associated smooth muscle cell | 2.66e-09 | 32 |
macrophage dendritic cell progenitor | 1.70e-08 | 61 |
subcutaneous fat cell | 3.19e-08 | 3 |
duct epithelial cell | 8.58e-08 | 3 |
branched duct epithelial cell | 8.58e-08 | 3 |
tracheal epithelial cell | 8.58e-08 | 3 |
tracheoblast | 8.58e-08 | 3 |
granulocyte monocyte progenitor cell | 1.45e-07 | 67 |
monopoietic cell | 3.30e-07 | 59 |
monocyte | 3.30e-07 | 59 |
monoblast | 3.30e-07 | 59 |
promonocyte | 3.30e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 3.82e-10 | 5 |
subclavian artery | 3.82e-10 | 5 |
hypodermis | 4.20e-10 | 5 |
musculoskeletal system | 2.46e-08 | 167 |
subcutaneous adipose tissue | 3.19e-08 | 3 |
mesoderm | 4.08e-08 | 315 |
mesoderm-derived structure | 4.08e-08 | 315 |
presumptive mesoderm | 4.08e-08 | 315 |
lateral plate mesoderm | 7.11e-08 | 203 |
bone marrow | 9.41e-08 | 76 |
trunk blood vessel | 2.27e-07 | 7 |
epithelial vesicle | 2.48e-07 | 78 |
bone element | 5.01e-07 | 82 |
artery | 8.29e-07 | 42 |
arterial blood vessel | 8.29e-07 | 42 |
arterial system | 8.29e-07 | 42 |