FFCP PHASE1:Hg19::chr14:55033818..55033909,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23034 | |EntrezGene=23034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23023 | |HGNC=23023 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000554335_5end | |association_with_transcript=3bp_to_ENST00000554335_5end | ||
|cluster_id=chr14:55033818..55033909,+ | |||
|description=CAGE_peak_1_at_SAMD4A_5end | |description=CAGE_peak_1_at_SAMD4A_5end | ||
|id=chr14:55033818..55033909,+ | |id=chr14:55033818..55033909,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.01e-14!180;CL:0000222!1.93e-12!119;CL:0000115!9.05e-10!35;CL:0000057!1.44e-09!75;CL:0002078!9.06e-09!44;CL:0000680!7.21e-08!57;CL:0000056!7.21e-08!57;CL:0000355!7.21e-08!57;CL:0002620!4.07e-07!23;CL:0000187!4.70e-07!54;CL:0002139!6.60e-07!24;CL:0000183!8.81e-07!59 | |ontology_enrichment_celltype=CL:0000055!8.01e-14!180;CL:0000222!1.93e-12!119;CL:0000115!9.05e-10!35;CL:0000057!1.44e-09!75;CL:0002078!9.06e-09!44;CL:0000680!7.21e-08!57;CL:0000056!7.21e-08!57;CL:0000355!7.21e-08!57;CL:0002620!4.07e-07!23;CL:0000187!4.70e-07!54;CL:0002139!6.60e-07!24;CL:0000183!8.81e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.68e-09;36!CL:0002139;3.52e-07;24!CL:0002620;4.75e-07;23!CL:0002078;9.75e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.17e-13,121;CL:0000115,1.73e-10,36;CL:0000057,7.49e-10,76;CL:0002078,2.05e-09,45;CL:0000680,4.63e-08,58;CL:0000056,4.63e-08,58;CL:0000355,4.63e-08,58;CL:0000187,3.11e-07,55;CL:0002620,3.33e-07,23;CL:0002139,4.18e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!2.06e-17!625;UBERON:0000483!3.38e-17!309;UBERON:0000119!3.67e-17!312;UBERON:0000480!4.96e-17!626;UBERON:0000468!8.97e-17!659;UBERON:0000477!1.30e-16!286;UBERON:0000475!1.15e-14!365;UBERON:0004111!1.76e-14!241;UBERON:0002049!3.72e-13!79;UBERON:0007798!3.72e-13!79;UBERON:0000481!3.18e-12!347;UBERON:0000025!8.26e-12!194;UBERON:0000055!7.00e-11!69;UBERON:0000914!1.79e-10!83;UBERON:0002329!1.79e-10!83;UBERON:0003077!1.79e-10!83;UBERON:0003059!1.79e-10!83;UBERON:0007282!1.79e-10!83;UBERON:0009618!1.79e-10!83;UBERON:0007285!1.79e-10!83;UBERON:0002050!6.72e-10!605;UBERON:0005423!6.72e-10!605;UBERON:0001049!7.66e-10!57;UBERON:0005068!7.66e-10!57;UBERON:0006241!7.66e-10!57;UBERON:0007135!7.66e-10!57;UBERON:0000064!1.38e-09!219;UBERON:0000923!1.39e-09!604;UBERON:0005291!1.39e-09!604;UBERON:0006598!1.39e-09!604;UBERON:0002532!1.39e-09!604;UBERON:0000922!1.43e-09!612;UBERON:0007023!1.59e-09!115;UBERON:0003075!2.27e-09!86;UBERON:0007284!2.27e-09!86;UBERON:0001981!2.97e-09!60;UBERON:0007500!2.97e-09!60;UBERON:0004537!2.97e-09!60;UBERON:0006965!2.97e-09!60;UBERON:0004290!3.34e-09!70;UBERON:0000486!4.74e-09!82;UBERON:0000062!7.40e-09!511;UBERON:0002616!1.13e-08!59;UBERON:0005256!1.86e-08!143;UBERON:0004872!2.05e-08!84;UBERON:0002385!2.67e-08!63;UBERON:0001015!2.67e-08!63;UBERON:0000383!2.67e-08!63;UBERON:0002346!5.23e-08!90;UBERON:0001134!7.98e-08!61;UBERON:0002036!7.98e-08!61;UBERON:0003082!7.98e-08!61;UBERON:0004121!1.10e-07!169;UBERON:0000033!1.59e-07!123;UBERON:0000490!2.28e-07!138;UBERON:0004535!5.90e-07!110;UBERON:0001009!6.41e-07!113;UBERON:0001637!6.51e-07!42;UBERON:0003509!6.51e-07!42;UBERON:0004572!6.51e-07!42;UBERON:0000924!7.52e-07!173;UBERON:0006601!7.52e-07!173;UBERON:0000955!8.21e-07!69;UBERON:0006238!8.21e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.74e-07;31!UBERON:0001015;5.74e-07;31!UBERON:0000383;5.74e-07;31 | |||
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| ||
|short_description=p1@SAMD4A | |short_description=p1@SAMD4A | ||
}} | }} |
Latest revision as of 07:56, 20 September 2015
Short description: | p1@SAMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SAMD4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000554335_5end |
EntrezGene: | SAMD4A |
HGNC: | 23023 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.17e-13 | 121 |
endothelial cell | 1.73e-10 | 36 |
fibroblast | 7.49e-10 | 76 |
meso-epithelial cell | 2.05e-09 | 45 |
muscle precursor cell | 4.63e-08 | 58 |
myoblast | 4.63e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.63e-08 | 58 |
muscle cell | 3.11e-07 | 55 |
skin fibroblast | 3.33e-07 | 23 |
endothelial cell of vascular tree | 4.18e-07 | 24 |