FFCP PHASE1:Hg19::chr15:65809991..65810035,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54878 | |EntrezGene=54878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16490 | |HGNC=16490 | ||
|TSSclassifier=strong | |||
|UniProt=C9JSG1,Q6V1X1 | |UniProt=C9JSG1,Q6V1X1 | ||
|association_with_transcript=0bp_to_ENST00000321118,ENST00000339244,ENST00000358939,ENST00000559526,ENST00000560665,NM_017743,NM_130434,NM_197961,uc002aox.2,uc002aoy.2,uc002aoz.2,uc010bhj.2_5end | |association_with_transcript=0bp_to_ENST00000321118,ENST00000339244,ENST00000358939,ENST00000559526,ENST00000560665,NM_017743,NM_130434,NM_197961,uc002aox.2,uc002aoy.2,uc002aoz.2,uc010bhj.2_5end | ||
|cluster_id=chr15:65809991..65810035,- | |||
|description=CAGE_peak_1_at_DPP8_5end | |description=CAGE_peak_1_at_DPP8_5end | ||
|id=chr15:65809991..65810035,- | |id=chr15:65809991..65810035,- | ||
|ontology_enrichment_celltype=CL:0000738!1.38e-19!140;CL:0000037!1.06e-17!172;CL:0000566!1.06e-17!172;CL:0002032!9.67e-16!165;CL:0000837!9.67e-16!165;CL:0000988!1.16e-15!182;CL:0002087!5.48e-15!119;CL:0002031!7.14e-14!124;CL:0000542!1.75e-09!53;CL:0000051!1.75e-09!53;CL:0000838!1.79e-09!52;CL:0000766!1.33e-08!76;CL:0000791!2.27e-08!18;CL:0000789!2.27e-08!18;CL:0002420!2.27e-08!18;CL:0002419!2.27e-08!18;CL:0000790!2.27e-08!18;CL:0000763!1.72e-07!112;CL:0000049!1.72e-07!112;CL:0000625!3.99e-07!11 | |ontology_enrichment_celltype=CL:0000738!1.38e-19!140;CL:0000037!1.06e-17!172;CL:0000566!1.06e-17!172;CL:0002032!9.67e-16!165;CL:0000837!9.67e-16!165;CL:0000988!1.16e-15!182;CL:0002087!5.48e-15!119;CL:0002031!7.14e-14!124;CL:0000542!1.75e-09!53;CL:0000051!1.75e-09!53;CL:0000838!1.79e-09!52;CL:0000766!1.33e-08!76;CL:0000791!2.27e-08!18;CL:0000789!2.27e-08!18;CL:0002420!2.27e-08!18;CL:0002419!2.27e-08!18;CL:0000790!2.27e-08!18;CL:0000763!1.72e-07!112;CL:0000049!1.72e-07!112;CL:0000625!3.99e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.64e-08;18!CL:0000789;2.64e-08;18!CL:0002419;2.64e-08;18!CL:0000625;3.98e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.96e-19,136;CL:0000037,6.43e-17,168;CL:0000988,2.07e-15,177;CL:0002032,5.48e-15,161;CL:0000837,5.48e-15,161;CL:0002087,3.11e-14,115;CL:0002031,3.89e-13,120;CL:0000542,1.75e-09,53;CL:0000051,1.75e-09,53;CL:0000838,1.79e-09,52;CL:0000791,2.27e-08,18;CL:0000789,2.27e-08,18;CL:0002420,2.27e-08,18;CL:0002419,2.27e-08,18;CL:0000790,2.27e-08,18;CL:0000766,6.25e-08,72;CL:0000625,3.99e-07,11;CL:0000763,6.79e-07,108;CL:0000049,6.79e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;2.64e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.27e-35!115;UBERON:0001049!1.18e-15!57;UBERON:0005068!1.18e-15!57;UBERON:0006241!1.18e-15!57;UBERON:0007135!1.18e-15!57;UBERON:0002780!2.65e-14!41;UBERON:0001890!2.65e-14!41;UBERON:0006240!2.65e-14!41;UBERON:0003080!5.11e-14!42;UBERON:0000955!1.81e-13!69;UBERON:0006238!1.81e-13!69;UBERON:0001893!4.18e-13!34;UBERON:0002616!4.38e-13!59;UBERON:0002020!7.03e-13!34;UBERON:0003528!7.03e-13!34;UBERON:0002791!1.71e-12!33;UBERON:0001869!2.11e-12!32;UBERON:0001017!3.59e-12!82;UBERON:0005743!2.13e-11!86;UBERON:0000073!6.40e-11!94;UBERON:0001016!6.40e-11!94;UBERON:0002619!6.65e-11!22;UBERON:0001950!3.31e-10!20;UBERON:0000956!1.34e-09!25;UBERON:0000203!1.34e-09!25;UBERON:0002390!6.48e-09!102;UBERON:0003061!6.48e-09!102;UBERON:0002193!5.44e-08!112;UBERON:0000178!1.06e-07!15;UBERON:0000179!1.06e-07!15;UBERON:0000463!1.06e-07!15;UBERON:0003075!1.09e-07!86;UBERON:0007284!1.09e-07!86;UBERON:0002346!2.02e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.38e-11;34!UBERON:0001869;4.57e-11;32!UBERON:0003528;5.56e-11;34!UBERON:0002020;5.56e-11;34!UBERON:0002619;7.48e-11;22!UBERON:0002791;8.69e-11;32!UBERON:0002780;2.28e-10;41!UBERON:0001890;2.28e-10;41!UBERON:0001950;3.64e-10;20!UBERON:0000956;1.58e-09;25!UBERON:0000203;1.58e-09;25!UBERON:0007023;2.39e-09;114!UBERON:0000073;8.01e-09;53!UBERON:0002616;8.01e-09;53!UBERON:0000178;9.88e-08;15!UBERON:0000179;9.88e-08;15!UBERON:0000463;9.88e-08;15!UBERON:0001017;9.30e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.18e-34,114;UBERON:0001049,6.87e-16,56;UBERON:0005068,6.87e-16,56;UBERON:0006241,6.87e-16,56;UBERON:0007135,6.87e-16,56;UBERON:0000073,8.27e-15,53;UBERON:0002616,8.27e-15,53;UBERON:0002780,2.65e-14,41;UBERON:0001890,2.65e-14,41;UBERON:0003080,2.65e-14,41;UBERON:0006240,2.65e-14,41;UBERON:0000955,1.26e-13,68;UBERON:0006238,1.26e-13,68;UBERON:0001893,4.18e-13,34;UBERON:0003528,7.03e-13,34;UBERON:0002020,7.03e-13,34;UBERON:0001869,2.11e-12,32;UBERON:0001017,2.74e-12,81;UBERON:0002791,4.64e-12,32;UBERON:0001016,1.05e-11,89;UBERON:0002619,6.65e-11,22;UBERON:0001950,3.31e-10,20;UBERON:0000956,1.34e-09,25;UBERON:0000203,1.34e-09,25;UBERON:0002390,2.89e-08,98;UBERON:0003061,2.89e-08,98;UBERON:0000178,1.06e-07,15;UBERON:0000179,1.06e-07,15;UBERON:0000463,1.06e-07,15;UBERON:0002193,2.22e-07,108;UBERON:0003075,3.98e-07,82;UBERON:0007284,3.98e-07,82;UBERON:0002346,7.18e-07,86 | |||
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| ||
|short_description=p1@DPP8 | |short_description=p1@DPP8 | ||
}} | }} |
Latest revision as of 15:14, 18 September 2015
Short description: | p1@DPP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DPP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000321118, ENST00000339244, ENST00000358939, ENST00000559526, ENST00000560665, NM_017743, NM_130434, NM_197961, uc002aox.2, uc002aoy.2, uc002aoz.2, uc010bhj.2_5end |
EntrezGene: | DPP8 |
HGNC: | 16490 |
UniProt: | C9JSG1Q6V1X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.96e-19 | 136 |
hematopoietic stem cell | 6.43e-17 | 168 |
hematopoietic cell | 2.07e-15 | 177 |
hematopoietic oligopotent progenitor cell | 5.48e-15 | 161 |
hematopoietic multipotent progenitor cell | 5.48e-15 | 161 |
nongranular leukocyte | 3.11e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.89e-13 | 120 |
lymphocyte | 1.75e-09 | 53 |
common lymphoid progenitor | 1.75e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.79e-09 | 52 |
mature alpha-beta T cell | 2.27e-08 | 18 |
alpha-beta T cell | 2.27e-08 | 18 |
immature T cell | 2.27e-08 | 18 |
mature T cell | 2.27e-08 | 18 |
immature alpha-beta T cell | 2.27e-08 | 18 |
myeloid leukocyte | 6.25e-08 | 72 |
CD8-positive, alpha-beta T cell | 3.99e-07 | 11 |
myeloid cell | 6.79e-07 | 108 |
common myeloid progenitor | 6.79e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.18e-34 | 114 |
neural tube | 6.87e-16 | 56 |
neural rod | 6.87e-16 | 56 |
future spinal cord | 6.87e-16 | 56 |
neural keel | 6.87e-16 | 56 |
regional part of nervous system | 8.27e-15 | 53 |
regional part of brain | 8.27e-15 | 53 |
regional part of forebrain | 2.65e-14 | 41 |
forebrain | 2.65e-14 | 41 |
anterior neural tube | 2.65e-14 | 41 |
future forebrain | 2.65e-14 | 41 |
brain | 1.26e-13 | 68 |
future brain | 1.26e-13 | 68 |
telencephalon | 4.18e-13 | 34 |
brain grey matter | 7.03e-13 | 34 |
gray matter | 7.03e-13 | 34 |
cerebral hemisphere | 2.11e-12 | 32 |
central nervous system | 2.74e-12 | 81 |
regional part of telencephalon | 4.64e-12 | 32 |
nervous system | 1.05e-11 | 89 |
regional part of cerebral cortex | 6.65e-11 | 22 |
neocortex | 3.31e-10 | 20 |
cerebral cortex | 1.34e-09 | 25 |
pallium | 1.34e-09 | 25 |
hematopoietic system | 2.89e-08 | 98 |
blood island | 2.89e-08 | 98 |
blood | 1.06e-07 | 15 |
haemolymphatic fluid | 1.06e-07 | 15 |
organism substance | 1.06e-07 | 15 |
hemolymphoid system | 2.22e-07 | 108 |
neural plate | 3.98e-07 | 82 |
presumptive neural plate | 3.98e-07 | 82 |
neurectoderm | 7.18e-07 | 86 |