FFCP PHASE1:Hg19::chr11:57558973..57558988,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1500 | |EntrezGene=1500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2515 | |HGNC=2515 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRE2 | |UniProt=E9PRE2 | ||
|association_with_transcript=-42bp_to_ENST00000534647_5end | |association_with_transcript=-42bp_to_ENST00000534647_5end | ||
|cluster_id=chr11:57558973..57558988,+ | |||
|coexpression_cluster_id=C2139 | |||
|description=CAGE_peak_11_at_CTNND1_5end | |description=CAGE_peak_11_at_CTNND1_5end | ||
|id=chr11:57558973..57558988,+ | |id=chr11:57558973..57558988,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.79e-28;2!CL:0001016;5.79e-28;2!CL:0000511;1.97e-14;1!CL:0002625;1.97e-14;1!CL:0002581;1.97e-14;1!CL:0000216;1.97e-14;1!CL:0000453;8.54e-12;5!CL:0000840;5.56e-10;5!CL:0002535;3.95e-08;2!CL:0000990;6.13e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.73e-28,2;CL:0001016,4.73e-28,2;CL:0000511,1.41e-14,1;CL:0002625,1.41e-14,1;CL:0000216,1.41e-14,1;CL:0002581,1.61e-14,1;CL:0000453,7.88e-12,5;CL:0000840,5.20e-10,5;CL:0001029,5.20e-10,5;CL:0000076,8.35e-10,63;CL:0002535,4.09e-08,2;CL:0000990,5.86e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.97e-14;1!UBERON:0008814;7.27e-08;2!UBERON:0010056;7.27e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!3.77e-08!14 | |ontology_enrichment_disease=DOID:1749!3.77e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.65e-34;14!DOID:3111;8.17e-15;1!DOID:3603;8.17e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.11e-34,14;DOID:3111,9.36e-15,1;DOID:3603,9.36e-15,1;DOID:305,3.06e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;8.17e-15;1!UBERON:0005056;8.17e-15;1!UBERON:0004176;8.17e-15;1!UBERON:0001136;1.97e-14;1!UBERON:0000941;1.97e-14;1!UBERON:0001343;1.97e-14;1!UBERON:0001785;1.97e-14;1!UBERON:0002464;1.97e-14;1!UBERON:0004904;1.97e-14;1!UBERON:0001021;1.97e-14;1!UBERON:0004910;1.97e-14;1!UBERON:0004813;1.97e-14;1!UBERON:0006955;3.95e-08;2!UBERON:0004801;3.95e-08;2!UBERON:0003714;7.27e-08;2!UBERON:0005162;7.27e-08;2!UBERON:0000122;7.27e-08;2!UBERON:0004909;7.27e-08;2!UBERON:0005406;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,8.17e-15,1;UBERON:0005056,8.17e-15,1;UBERON:0001136,1.41e-14,1;UBERON:0001343,1.41e-14,1;UBERON:0004910,1.41e-14,1;UBERON:0005154,1.41e-14,1;UBERON:0005295,1.41e-14,1;UBERON:0004813,1.41e-14,1;UBERON:0005297,1.41e-14,1;UBERON:0005294,1.41e-14,1;UBERON:0010141,1.41e-14,1;UBERON:0005891,1.41e-14,1;UBERON:0000941,1.84e-14,1;UBERON:0001785,1.84e-14,1;UBERON:0002464,1.84e-14,1;UBERON:0004904,1.84e-14,1;UBERON:0001021,1.84e-14,1;UBERON:0003902,1.84e-14,1;UBERON:0005425,1.84e-14,1;UBERON:0006955,4.09e-08,2;UBERON:0004801,4.09e-08,2;UBERON:0004909,6.15e-08,2;UBERON:0005406,6.58e-08,2;UBERON:0003714,7.03e-08,2;UBERON:0005162,7.03e-08,2;UBERON:0000122,7.03e-08,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0.727752183563449,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0.895585227028483,2.03443756959773,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0.137836572484531,0.322260734604821,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0.5745161103971,0.211673582723883,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0,1.365521379426,0,0.709163045303809,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0.23056390438806,0,0,0,0,0.533034776018635,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11568069140386,6.61649970011059,0.17472666824203,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0.0633107959558787,0.586654148204409,0,0,0,0,0,0,0,0,1.17847017308398,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0.275078873194468,0,6.97419063809651,4.6428117273477,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.57511886655273,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0,0,4.01493034381391,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0.183428598521679,1.15525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0.157115589916002,0.280272163313789,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0.447421727191169,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0.128915775947154,0,1.60698544745092,0.352894871715692,0,0.730336388246517,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0.203977659483963,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0.727752183563449,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0.895585227028483,2.03443756959773,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0.137836572484531,0.322260734604821,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0.5745161103971,0.211673582723883,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0,0,0,0,0,1.365521379426,0,0.709163045303809,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0.23056390438806,0,0,0,0,0.533034776018635,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11568069140386,6.61649970011059,0.17472666824203,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0.0633107959558787,0.586654148204409,0,0,0,0,0,0,0,0,1.17847017308398,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0.275078873194468,0,6.97419063809651,4.6428117273477,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.57511886655273,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0,0,4.01493034381391,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0.183428598521679,1.15525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0.157115589916002,0.280272163313789,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0.447421727191169,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0.128915775947154,0,1.60698544745092,0.352894871715692,0,0.730336388246517,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0.203977659483963,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p11@CTNND1 | |short_description=p11@CTNND1 | ||
}} | }} |
Latest revision as of 10:59, 18 September 2015
Short description: | p11@CTNND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CTNND1_5end |
Coexpression cluster: | C2139_malignant_immature_epidermoid_mucinous_squamous_serous_oral |
Association with transcript: | -42bp_to_ENST00000534647_5end |
EntrezGene: | CTNND1 |
HGNC: | 2515 |
UniProt: | E9PRE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.73e-28 | 2 |
immature CD1a-positive Langerhans cell | 4.73e-28 | 2 |
androgen binding protein secreting cell | 1.41e-14 | 1 |
seminiferous tubule epithelial cell | 1.41e-14 | 1 |
Sertoli cell | 1.41e-14 | 1 |
perirenal preadipocyte | 1.61e-14 | 1 |
Langerhans cell | 7.88e-12 | 5 |
immature conventional dendritic cell | 5.20e-10 | 5 |
common dendritic progenitor | 5.20e-10 | 5 |
squamous epithelial cell | 8.35e-10 | 63 |
epithelial cell of cervix | 4.09e-08 | 2 |
conventional dendritic cell | 5.86e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 8.17e-15 | 1 |
external female genitalia | 8.17e-15 | 1 |
mesothelium | 1.41e-14 | 1 |
seminiferous tubule of testis | 1.41e-14 | 1 |
epithelium of male gonad | 1.41e-14 | 1 |
epithelial cord | 1.41e-14 | 1 |
sex cord | 1.41e-14 | 1 |
seminiferous tubule epithelium | 1.41e-14 | 1 |
testis sex cord | 1.41e-14 | 1 |
genital ridge | 1.41e-14 | 1 |
primitive sex cord of indifferent gonad | 1.41e-14 | 1 |
coelomic epithelium | 1.41e-14 | 1 |
cranial nerve II | 1.84e-14 | 1 |
cranial nerve | 1.84e-14 | 1 |
nerve trunk | 1.84e-14 | 1 |
nerve connecting eye with brain | 1.84e-14 | 1 |
nerve | 1.84e-14 | 1 |
retinal neural layer | 1.84e-14 | 1 |
presumptive neural retina | 1.84e-14 | 1 |
uterine epithelium | 4.09e-08 | 2 |
cervix epithelium | 4.09e-08 | 2 |
epithelium of gonad | 6.15e-08 | 2 |
perirenal fat | 6.58e-08 | 2 |
neural tissue | 7.03e-08 | 2 |
multi cell component structure | 7.03e-08 | 2 |
neuron projection bundle | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.11e-34 | 14 |
cystadenocarcinoma | 9.36e-15 | 1 |
mucinous cystadenocarcinoma | 9.36e-15 | 1 |
carcinoma | 3.06e-07 | 106 |