FFCP PHASE1:Hg19::chr11:68451973..68451986,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51083 | |EntrezGene=51083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4114 | |HGNC=4114 | ||
|TSSclassifier=strong | |||
|UniProt=P22466 | |UniProt=P22466 | ||
|association_with_transcript=0bp_to_NM_015973,uc001oob.2_5end | |association_with_transcript=0bp_to_NM_015973,uc001oob.2_5end | ||
|cluster_id=chr11:68451973..68451986,+ | |||
|description=CAGE_peak_2_at_GAL_5end | |description=CAGE_peak_2_at_GAL_5end | ||
|id=chr11:68451973..68451986,+ | |id=chr11:68451973..68451986,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.49e-26!254;CL:1000449!1.53e-09!16;CL:0002321!1.97e-09!248;CL:0000115!6.38e-09!35;CL:0000220!8.34e-09!246;CL:0000071!1.46e-08!18;CL:0002546!1.46e-08!18;CL:0002078!1.72e-08!44;CL:0000076!2.97e-08!62;CL:0002139!4.82e-08!24;CL:1000507!5.98e-08!12;CL:1000494!5.98e-08!12;CL:0000213!8.13e-08!57;CL:0000215!8.13e-08!57;CL:0002681!9.93e-08!13;CL:0002584!9.93e-08!13;CL:1000497!1.29e-07!18;CL:0002518!1.29e-07!18 | |ontology_enrichment_celltype=CL:0000066!5.49e-26!254;CL:1000449!1.53e-09!16;CL:0002321!1.97e-09!248;CL:0000115!6.38e-09!35;CL:0000220!8.34e-09!246;CL:0000071!1.46e-08!18;CL:0002546!1.46e-08!18;CL:0002078!1.72e-08!44;CL:0000076!2.97e-08!62;CL:0002139!4.82e-08!24;CL:1000507!5.98e-08!12;CL:1000494!5.98e-08!12;CL:0000213!8.13e-08!57;CL:0000215!8.13e-08!57;CL:0002681!9.93e-08!13;CL:0002584!9.93e-08!13;CL:1000497!1.29e-07!18;CL:0002518!1.29e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.32e-12;15!CL:1000497;2.84e-10;17!CL:0002518;2.84e-10;17!CL:0002681;6.98e-10;12!CL:0002584;6.98e-10;12!CL:1000507;1.89e-09;10!CL:1000494;1.89e-09;10!CL:0000071;4.25e-09;18!CL:0000115;1.07e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.16e-29,253;CL:1000449,3.11e-12,15;CL:0000076,3.27e-10,63;CL:0002321,3.27e-10,250;CL:1000497,3.63e-10,17;CL:0002518,3.63e-10,17;CL:0002681,9.63e-10,12;CL:0002584,9.63e-10,12;CL:1000507,2.04e-09,10;CL:1000494,2.04e-09,10;CL:0000071,2.27e-09,18;CL:0002546,2.27e-09,18;CL:0000115,2.68e-09,36;CL:0002078,1.19e-08,45;CL:0000213,3.03e-08,58;CL:0000215,3.03e-08,58 | |||
|ontology_enrichment_development_v019=CL:0002546;4.25e-09;18 | |||
|ontology_enrichment_disease=DOID:0050687!6.85e-09!143;DOID:3095!2.91e-07!22;DOID:2994!2.91e-07!22;DOID:305!4.31e-07!106 | |ontology_enrichment_disease=DOID:0050687!6.85e-09!143;DOID:3095!2.91e-07!22;DOID:2994!2.91e-07!22;DOID:305!4.31e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.21e-08;22!DOID:2994;3.21e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.96e-10,143;DOID:162,1.20e-09,235;DOID:14566,6.23e-09,239;DOID:305,1.04e-08,106;DOID:3095,2.81e-08,22;DOID:2994,2.81e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0004211!1.53e-09!16;UBERON:0001285!1.53e-09!16;UBERON:0007684!1.53e-09!16;UBERON:0003220!1.53e-09!16;UBERON:0004208!1.53e-09!16;UBERON:0006555!2.52e-09!17;UBERON:0005103!2.52e-09!17;UBERON:0000083!2.52e-09!17;UBERON:0009201!2.52e-09!17;UBERON:0004819!2.52e-09!17;UBERON:0006553!2.52e-09!17;UBERON:0003074!2.52e-09!17;UBERON:0003060!2.52e-09!17;UBERON:0000063!9.11e-09!97;UBERON:0001986!1.46e-08!18;UBERON:0004638!1.46e-08!18;UBERON:0004852!1.46e-08!18;UBERON:0000080!2.36e-08!18;UBERON:0002120!2.36e-08!18;UBERON:0004875!2.36e-08!18;UBERON:0005721!2.36e-08!18;UBERON:0005754!2.36e-08!18;UBERON:0007297!2.36e-08!18;UBERON:0001737!3.52e-08!9;UBERON:0000064!3.54e-08!219;UBERON:0006554!3.81e-08!44;UBERON:0000468!4.68e-08!659;UBERON:0009773!5.98e-08!12;UBERON:0001231!5.98e-08!12;UBERON:0004810!5.98e-08!12;UBERON:0001225!9.93e-08!13;UBERON:0008987!9.93e-08!13;UBERON:0000483!1.03e-07!309;UBERON:0000922!1.09e-07!612;UBERON:0001008!1.13e-07!45;UBERON:0000119!1.31e-07!312;UBERON:0003064!3.76e-07!37;UBERON:0008947!5.20e-07!38;UBERON:0003258!5.20e-07!38;UBERON:0000353!8.13e-07!17;UBERON:0004876!9.45e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.32e-12;15!UBERON:0004819;2.32e-12;15!UBERON:0001285;2.32e-12;15!UBERON:0007684;2.32e-12;15!UBERON:0001737;1.17e-10;9!UBERON:0001557;1.17e-10;9!UBERON:0000353;5.05e-10;15!UBERON:0001225;6.98e-10;12!UBERON:0008987;6.98e-10;12!UBERON:0004211;1.89e-09;10!UBERON:0009773;1.89e-09;10!UBERON:0001231;1.89e-09;10!UBERON:0004810;1.89e-09;10!UBERON:0006554;2.27e-09;30!UBERON:0001008;2.27e-09;30!UBERON:0004638;4.25e-09;18!UBERON:0001986;4.25e-09;18!UBERON:0004852;4.25e-09;18!UBERON:0000490;2.55e-08;33!UBERON:0000072;3.98e-08;37!UBERON:0002113;4.53e-08;24!UBERON:0011143;4.53e-08;24!UBERON:0000487;9.85e-08;22!UBERON:0001851;3.91e-07;15!UBERON:0000065;4.91e-07;44 | |||
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|phase1_expression=0,0,0,2.00146596706261,0,0.872338524100369,0,0,0,6.14334841253772,11.1648186875588,1.74753097704138,2.37390280405608,0,0,0,0,0.730310090387373,0,0.369363174230364,0,1.25381888591235,0,1.50561867580173,0.502170558379211,0,0,0,0,0,0,7.35536979583142,1.50602959389125,2.58827807116751,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.255725123687061,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0.130979075497713,2.91436230634034,5.19098219898201,0,0,0.531831842075461,0,0,0,1.98762407366705,6.02164216574287,2.77712401286075,0.56530794192401,12.5849830862972,10.1793675517825,3.76190939766259,0.516833518338658,0.35576626268671,0,1.61131726843659,8.36299316290364,4.63717909341522,3.67663080345869,1.62028389576352,0.803697554556718,4.4905874525234,5.29273958271614,4.5994991239765,5.69559395740877,9.52649068438118,0,0,1.74437620857014,0,0,0,0,0,1.12135520028461,1.06748995729705,9.8667019366864,0.622422070799533,1.21239604862719,1.14423332179421,0.605429710579726,0,0.468642863667593,0.624320153660641,1.1409436430889,1.94283284717341,5.63685593490071,4.37056949793955,2.52811452064047,0,0.491337269247072,0.103325781175765,0,0,0.910161361938026,0,0.336672227908132,0.625592599359821,0,0,0,0,0.680593098960126,0.358779271377724,0,0.423863802319124,2.10063767259082,0.92747276314595,0,0.18611685633159,0.506328996723799,0.68205903612839,0.252433774244115,0.0920498986422993,0,2.4850671476163,0.906768884048762,0,1.15956511897978,1.90922284413584,1.14721838155602,17.8081610949209,16.8312805768286,14.1756610300812,9.53681706141408,14.8869302016621,6.20461510428911,0,0,0,0,0,27.6837912093235,29.3337360735897,33.500533153804,29.117608801352,32.0282782815837,28.2352036742205,33.9774896563614,33.7500920015595,33.473002654336,2.95262181849859,9.81692416624121,0,0,0,0,0,0,1.59884970106048,0.686271241194102,1.53650399572076,6.74410519545717,3.31745608958382,1.11106134190236,0.977424915930974,3.11980435583874,0,0.811512834825538,0,1.58803092537181,0.925971025153221,0.951270761172991,0.790204397959275,2.57545848628462,0,3.97807250736704,3.41851673264075,2.81201501960331,0.503946384596579,3.54437743105966,0.716468181622786,0.581267877027924,0,0,0,0,0,0,0.380987365753014,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0.129271715757778,0,3.381211010224,0,0,1.02882949704857,1.41849132023278,0.266422179016099,0.285955987316295,0,9.87888404136923,1.30294473717494,0,12.6712299669349,0,0,0.199945982364114,2.43247561282381,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,3.90419561572865,1.54657762555539,1.00509759200609,4.46557126157214,0,0,0,0,0.500170521059677,0.271265023699736,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,2.60650843404249,0.391602314925481,1.37257369524342,0,0,0,1.81876542867756,3.32870879020994,1.5119514666484,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,5.31781578203138,1.20303882181971,6.26150724764095,1.95184561879831,1.45672934405374,0.131124414959424,12.6335891614075,3.46569016969866,14.9026456143602,16.0753147118587,5.91089121800104,1.13733384070897,5.4429985688485,4.53423423814493,4.62681758070868,3.25135725052623,9.03041592938736,10.4499271948466,25.7633562767905,11.6414872455533,0.219259876645935,0.784306353074702,1.53870075069834,0.328014645699706,0.650756789328606,0,0,0,1.14853107599234,3.25030123018261,0,0,0.154048617114644,0,2.20538515975249,0,0.870100163485371,0.340906509664404,0,2.64455864577565,1.53752053892085,0.510450849978337,2.93357564481095,0,0.31481234683064,0,0.308033580176089,0,1.73986598415015,0,0.286249773483982,0,0,0,2.303080121802,1.71175595213568,0.318203247925937,0,0.179872457583315,1.09814811894422,2.35624804691373,0,0,0.421258456238981,3.41343617362713,0.243713489631284,0,0.272999822815972,0.141405431953713,2.26016233240486,0,0,0,3.47265320560013,2.62357900818653,0,1.8589409885985,0.281695602532241,2.15117028306077,0.491245205065606,0.35667105148125,1.77380532035299,0,0,1.51789269506286,1.39973888097993,0.673554789078584,0.670302275535787,0,0,6.02707521739722,6.73885902670502,6.65145230305014,4.36474460393223,0,0,0,0,0,0,0,0,0,0,12.0069705830706,0,0,0,0,0,0,0,14.9326092526296,0,0,61.4185191430251,0,0,0,1.21079824314629,7.66523227842587,0,4.30137070031841,3.57881772627865,3.8375302593739,15.8264357275653,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0.276283915531148,8.06184793133683,3.47713520507326,0,0,0,0,1.53471711068062,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,1.99613798001194,1.5625665665114,0,0.724999575434793,18.3207451739654,0,6.85524277127015,3.44743373241465,5.83209226766509,0.173624994933292,0,0,1.52581736317083,0.110579259931225,0.591095237907095,0.2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| ||
|short_description=p2@GAL | |short_description=p2@GAL | ||
}} | }} |
Latest revision as of 20:26, 19 September 2015
Short description: | p2@GAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GAL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_015973, uc001oob.2_5end |
EntrezGene: | GAL |
HGNC: | 4114 |
UniProt: | P22466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.16e-29 | 253 |
epithelial cell of nephron | 3.11e-12 | 15 |
squamous epithelial cell | 3.27e-10 | 63 |
embryonic cell | 3.27e-10 | 250 |
kidney cell | 3.63e-10 | 17 |
kidney epithelial cell | 3.63e-10 | 17 |
kidney cortical cell | 9.63e-10 | 12 |
renal cortical epithelial cell | 9.63e-10 | 12 |
kidney tubule cell | 2.04e-09 | 10 |
nephron tubule epithelial cell | 2.04e-09 | 10 |
blood vessel endothelial cell | 2.27e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.27e-09 | 18 |
endothelial cell | 2.68e-09 | 36 |
meso-epithelial cell | 1.19e-08 | 45 |
lining cell | 3.03e-08 | 58 |
barrier cell | 3.03e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 3.11e-12 | 15 |
renal tubule | 3.11e-12 | 15 |
nephron tubule | 3.11e-12 | 15 |
nephron | 3.11e-12 | 15 |
uriniferous tubule | 3.11e-12 | 15 |
nephrogenic mesenchyme | 3.11e-12 | 15 |
excretory tube | 3.93e-11 | 16 |
kidney epithelium | 3.93e-11 | 16 |
larynx | 1.21e-10 | 9 |
urinary system structure | 4.03e-10 | 47 |
parenchyma | 5.82e-10 | 15 |
cortex of kidney | 9.63e-10 | 12 |
renal parenchyma | 9.63e-10 | 12 |
renal system | 1.04e-09 | 48 |
nephron tubule epithelium | 2.04e-09 | 10 |
blood vessel endothelium | 2.27e-09 | 18 |
endothelium | 2.27e-09 | 18 |
cardiovascular system endothelium | 2.27e-09 | 18 |
simple squamous epithelium | 6.04e-08 | 22 |
respiratory primordium | 2.53e-07 | 38 |
endoderm of foregut | 2.53e-07 | 38 |
cortex | 4.95e-07 | 15 |
segment of respiratory tract | 5.33e-07 | 47 |
kidney | 5.61e-07 | 26 |
kidney mesenchyme | 5.61e-07 | 26 |
upper urinary tract | 5.61e-07 | 26 |
kidney rudiment | 5.61e-07 | 26 |
kidney field | 5.61e-07 | 26 |
respiratory tract | 8.56e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.96e-10 | 143 |
cancer | 1.20e-09 | 235 |
disease of cellular proliferation | 6.23e-09 | 239 |
carcinoma | 1.04e-08 | 106 |
germ cell and embryonal cancer | 2.81e-08 | 22 |
germ cell cancer | 2.81e-08 | 22 |