FFCP PHASE1:Hg19::chr10:65225728..65225755,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:65225728..65225755,-
|short_description=p4@JMJD1C
|description=CAGE_peak_4_at_JMJD1C_5end
|association_with_transcript=-6bp_to_ENST00000399251,NM_032776,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221037 | |EntrezGene=221037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12313 | |HGNC=12313 | ||
|UniProt=A0T124, | |TSSclassifier=strong | ||
|UniProt=A0T124,Q15652 | |||
|association_with_transcript=-6bp_to_ENST00000399251,NM_032776,uc001jmn.2,uc001jmr.1_5end | |||
|cluster_id=chr10:65225728..65225755,- | |||
|description=CAGE_peak_4_at_JMJD1C_5end | |||
|id=chr10:65225728..65225755,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.12e-16!115;UBERON:0001017!1.91e-13!82;UBERON:0005743!3.52e-13!86;UBERON:0000073!9.29e-12!94;UBERON:0001016!9.29e-12!94;UBERON:0001049!3.63e-11!57;UBERON:0005068!3.63e-11!57;UBERON:0006241!3.63e-11!57;UBERON:0007135!3.63e-11!57;UBERON:0002616!4.18e-11!59;UBERON:0000955!1.02e-10!69;UBERON:0006238!1.02e-10!69;UBERON:0003075!1.04e-09!86;UBERON:0007284!1.04e-09!86;UBERON:0002346!2.06e-08!90;UBERON:0003080!5.42e-08!42;UBERON:0002780!1.42e-07!41;UBERON:0001890!1.42e-07!41;UBERON:0006240!1.42e-07!41;UBERON:0002619!1.45e-07!22;UBERON:0001950!4.23e-07!20;UBERON:0000956!4.35e-07!25;UBERON:0000203!4.35e-07!25;UBERON:0002020!9.65e-07!34;UBERON:0003528!9.65e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.20e-07;22!UBERON:0001950;4.49e-07;20!UBERON:0000956;4.72e-07;25!UBERON:0000203;4.72e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.11e-16,114;UBERON:0001017,5.69e-13,81;UBERON:0001016,3.58e-11,89;UBERON:0001049,1.31e-10,56;UBERON:0005068,1.31e-10,56;UBERON:0006241,1.31e-10,56;UBERON:0007135,1.31e-10,56;UBERON:0000955,3.29e-10,68;UBERON:0006238,3.29e-10,68;UBERON:0000073,1.19e-09,53;UBERON:0002616,1.19e-09,53;UBERON:0003075,1.02e-07,82;UBERON:0007284,1.02e-07,82;UBERON:0002619,1.80e-07,22;UBERON:0002780,2.15e-07,41;UBERON:0001890,2.15e-07,41;UBERON:0003080,2.15e-07,41;UBERON:0006240,2.15e-07,41;UBERON:0010314,4.60e-07,132;UBERON:0000956,5.25e-07,25;UBERON:0000203,5.25e-07,25;UBERON:0001950,5.42e-07,20 | |||
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| ||
|short_description=p4@JMJD1C | |||
}} | }} |
Latest revision as of 20:39, 18 September 2015
Short description: | p4@JMJD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_JMJD1C_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000399251, NM_032776, uc001jmn.2, uc001jmr.1_5end |
EntrezGene: | JMJD1C |
HGNC: | 12313 |
UniProt: | A0T124Q15652 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.11e-16 | 114 |
central nervous system | 5.69e-13 | 81 |
nervous system | 3.58e-11 | 89 |
neural tube | 1.31e-10 | 56 |
neural rod | 1.31e-10 | 56 |
future spinal cord | 1.31e-10 | 56 |
neural keel | 1.31e-10 | 56 |
brain | 3.29e-10 | 68 |
future brain | 3.29e-10 | 68 |
regional part of nervous system | 1.19e-09 | 53 |
regional part of brain | 1.19e-09 | 53 |
neural plate | 1.02e-07 | 82 |
presumptive neural plate | 1.02e-07 | 82 |
regional part of cerebral cortex | 1.80e-07 | 22 |
regional part of forebrain | 2.15e-07 | 41 |
forebrain | 2.15e-07 | 41 |
anterior neural tube | 2.15e-07 | 41 |
future forebrain | 2.15e-07 | 41 |
structure with developmental contribution from neural crest | 4.60e-07 | 132 |
cerebral cortex | 5.25e-07 | 25 |
pallium | 5.25e-07 | 25 |
neocortex | 5.42e-07 | 20 |