FFCP PHASE1:Hg19::chr12:121974134..121974155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84678 | |EntrezGene=84678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13610 | |HGNC=13610 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7T7 | |UniProt=F5H7T7 | ||
|association_with_transcript=0bp_to_ENST00000541511_5end | |association_with_transcript=0bp_to_ENST00000541511_5end | ||
|cluster_id=chr12:121974134..121974155,- | |||
|description=CAGE_peak_13_at_KDM2B_5end | |description=CAGE_peak_13_at_KDM2B_5end | ||
|id=chr12:121974134..121974155,- | |id=chr12:121974134..121974155,- | ||
|ontology_enrichment_celltype=CL:0000945!8.02e-25!24;CL:0000826!8.02e-25!24;CL:0000542!7.08e-18!53;CL:0000051!7.08e-18!53;CL:0000838!4.88e-17!52;CL:0000236!3.49e-14!14 | |ontology_enrichment_celltype=CL:0000945!8.02e-25!24;CL:0000826!8.02e-25!24;CL:0000542!7.08e-18!53;CL:0000051!7.08e-18!53;CL:0000838!4.88e-17!52;CL:0000236!3.49e-14!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.95e-54;24!CL:0000236;8.20e-26;13!CL:0000542;9.27e-18;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.11e-54,24;CL:0000826,1.11e-54,24;CL:0000542,5.99e-25,53;CL:0000051,5.99e-25,53;CL:0000236,4.89e-24,14;CL:0000838,7.61e-23,52;CL:0002087,5.74e-09,115;CL:0000738,7.54e-08,136;CL:0002031,1.93e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;9.27e-18;53!UBERON:0006215;1.88e-13;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.13e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.26e-15,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.32e-28!115;UBERON:0001049!1.40e-22!57;UBERON:0005068!1.40e-22!57;UBERON:0006241!1.40e-22!57;UBERON:0007135!1.40e-22!57;UBERON:0002616!1.82e-21!59;UBERON:0002780!9.75e-21!41;UBERON:0001890!9.75e-21!41;UBERON:0006240!9.75e-21!41;UBERON:0003080!5.57e-20!42;UBERON:0000955!1.58e-19!69;UBERON:0006238!1.58e-19!69;UBERON:0001017!4.53e-19!82;UBERON:0001893!1.25e-18!34;UBERON:0002020!1.42e-18!34;UBERON:0003528!1.42e-18!34;UBERON:0005743!2.22e-18!86;UBERON:0001869!9.24e-18!32;UBERON:0002791!9.96e-18!33;UBERON:0000073!7.29e-16!94;UBERON:0001016!7.29e-16!94;UBERON:0003075!3.21e-15!86;UBERON:0007284!3.21e-15!86;UBERON:0001950!7.67e-15!20;UBERON:0002619!9.90e-15!22;UBERON:0003056!3.72e-14!61;UBERON:0002346!6.76e-14!90;UBERON:0000956!1.79e-13!25;UBERON:0000203!1.79e-13!25;UBERON:0000153!1.85e-10!129;UBERON:0007811!1.85e-10!129;UBERON:0000033!1.67e-09!123;UBERON:0002420!1.99e-07!9;UBERON:0007245!1.99e-07!9;UBERON:0010009!1.99e-07!9;UBERON:0010011!1.99e-07!9;UBERON:0000454!1.99e-07!9;UBERON:0001871!2.08e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.20e-11;20!UBERON:0002619;2.77e-10;22!UBERON:0001871;8.87e-10;6!UBERON:0001876;3.51e-09;2!UBERON:0000956;5.92e-09;25!UBERON:0000203;5.92e-09;25!UBERON:0002791;1.19e-07;32!UBERON:0001869;1.19e-07;32!UBERON:0003528;2.73e-07;34!UBERON:0002020;2.73e-07;34!UBERON:0002037;6.12e-07;6!UBERON:0002780;6.85e-07;41!UBERON:0001890;6.85e-07;41!UBERON:0000073;6.98e-07;53!UBERON:0002616;6.98e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.18e-11,20;UBERON:0002619,2.74e-10,22;UBERON:0000073,3.43e-10,53;UBERON:0002616,3.43e-10,53;UBERON:0001871,5.99e-10,6;UBERON:0001049,1.63e-09,56;UBERON:0005068,1.63e-09,56;UBERON:0006241,1.63e-09,56;UBERON:0007135,1.63e-09,56;UBERON:0001876,2.86e-09,2;UBERON:0000956,5.88e-09,25;UBERON:0000203,5.88e-09,25;UBERON:0000955,1.24e-08,68;UBERON:0006238,1.24e-08,68;UBERON:0002791,1.45e-08,32;UBERON:0001869,1.45e-08,32;UBERON:0003528,5.48e-08,34;UBERON:0002020,5.48e-08,34;UBERON:0001893,5.48e-08,34;UBERON:0001017,5.76e-08,81;UBERON:0002780,6.11e-08,41;UBERON:0001890,6.11e-08,41;UBERON:0003080,6.11e-08,41;UBERON:0006240,6.11e-08,41;UBERON:0002037,5.48e-07,6;UBERON:0006215,5.48e-07,6;UBERON:0001016,6.94e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,2.52164238968239,1.72411237844886,2.44003422072406,0,0,0,0,0,0,2.32401601740905,4.69158467208491,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,3.82297027883492,3.55803701545422,1.70692089026603,3.60356388332411,1.14950487990897,0.661044872784862,0.954053754535364,2.27685187643779,0.587237189370939,2.6759125968766,0,0,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,1.30139853857622,0,0.837581326671744,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0.534120355637366,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0.228234679033192,0.47003968731907,0,0,0.321176150207399,0.403599414382095,0.851692475380653,0,0,0.223676107892416,0.333698283423817,0.976940477010201,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,0,1.65770349318689,0,0,2.09244169283818,0,0,0,0.511572370226872,0.197286811273867,2.3948309234694,0,0,0.556608588971108,5.98841394003583,0,0,0,0.227586896570999,0,0,0.344743373241465,0.291604613383254,0,0,0.844175070377856,3.05163472634166,1.76926815889959,1.18219047581419,0.438770794307945,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,1.23563938946503,0.835375596043643,0.067401132980677,0.802577647298789,1.40558667435203,2.73682183823499,0,0,0.394584402849391,0,2.75465485467441,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0.0882561266915003,0.451961481561065,0,0,1.01297273529406,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0.525774708558629,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,1.35477331305255,0,0.681017030557878,0,0,0,0.449947783103001,0,1.03274246318642,0,0,0.419636705079985,0,0,0,0,0,0.5085370753095,0.542999601753713,1.72844298240254,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0.320362237703084,0.157204305099666,0.414239055347196,1.48849806543585,0,1.46151118057075,0,0,0.2506898940227,0,0,0,0,0.610131324509816,0.751145584238999,0,0.554645257684261,0.124192805882767,0,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0.389720617678777,1.0629187225069,0.654261577023377,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.770750701157514,1.41696576325585,0.798169295285756,0.41023272848151,1.51243017733031,0.899044282034833,1.13032951942296,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.87798860003913,0,0.620060389503552,0.19024743058172,0.546974809018219,0,0,0,0,0.535701835878287,0.672567444437648,0,0.227662191351298,0.0887023701626388,0.806637912890455,0,0.475788130837822,0.657727735628491,0,0,0.313972371402056,0.942693539496011,0,2.73947616152849,0,0,0.285906176706625,0.632054446930906,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0.939839179798536,0.257831551894309,1.99882311849858,0,0,0,0,0,0.143339583151451,0.315543124386369,0.815897882290976,2.61810414204226,0,0,0,0,0,0.218531143927391,0.126698501011437,0.407955318967927,0.26721740526556,0,1.0028301571695,0.0757786982182394,0.535928260312357,0,0.20686599172379,0.213233981900981,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0.80822463617505,0.215166616178029,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,1.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| ||
|short_description=p13@KDM2B | |short_description=p13@KDM2B | ||
}} | }} |
Latest revision as of 22:04, 16 September 2015
Short description: | p13@KDM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KDM2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000541511_5end |
EntrezGene: | KDM2B |
HGNC: | 13610 |
UniProt: | F5H7T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.11e-54 | 24 |
pro-B cell | 1.11e-54 | 24 |
lymphocyte | 5.99e-25 | 53 |
common lymphoid progenitor | 5.99e-25 | 53 |
B cell | 4.89e-24 | 14 |
lymphoid lineage restricted progenitor cell | 7.61e-23 | 52 |
nongranular leukocyte | 5.74e-09 | 115 |
leukocyte | 7.54e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 1.93e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.18e-11 | 20 |
regional part of cerebral cortex | 2.74e-10 | 22 |
regional part of nervous system | 3.43e-10 | 53 |
regional part of brain | 3.43e-10 | 53 |
temporal lobe | 5.99e-10 | 6 |
neural tube | 1.63e-09 | 56 |
neural rod | 1.63e-09 | 56 |
future spinal cord | 1.63e-09 | 56 |
neural keel | 1.63e-09 | 56 |
amygdala | 2.86e-09 | 2 |
cerebral cortex | 5.88e-09 | 25 |
pallium | 5.88e-09 | 25 |
brain | 1.24e-08 | 68 |
future brain | 1.24e-08 | 68 |
regional part of telencephalon | 1.45e-08 | 32 |
cerebral hemisphere | 1.45e-08 | 32 |
brain grey matter | 5.48e-08 | 34 |
gray matter | 5.48e-08 | 34 |
telencephalon | 5.48e-08 | 34 |
central nervous system | 5.76e-08 | 81 |
regional part of forebrain | 6.11e-08 | 41 |
forebrain | 6.11e-08 | 41 |
anterior neural tube | 6.11e-08 | 41 |
future forebrain | 6.11e-08 | 41 |
cerebellum | 5.48e-07 | 6 |
rhombic lip | 5.48e-07 | 6 |
nervous system | 6.94e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.26e-15 | 10 |