FFCP PHASE1:Hg19::chr14:55251070..55251099,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23034 | |EntrezGene=23034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23023 | |HGNC=23023 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENST00000555719_5end | |association_with_transcript=86bp_to_ENST00000555719_5end | ||
|cluster_id=chr14:55251070..55251099,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_SAMD4A_5end | |description=CAGE_peak_4_at_SAMD4A_5end | ||
|id=chr14:55251070..55251099,+ | |id=chr14:55251070..55251099,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;7.71e-17;4!UBERON:0007284;7.71e-17;4!UBERON:0010226;8.15e-09;1!UBERON:0010227;1.02e-08;1!UBERON:0004140;1.37e-08;1!UBERON:0000358;1.53e-08;1!UBERON:0004874;2.37e-08;1!UBERON:0003104;9.50e-08;31!UBERON:0006603;3.47e-07;65 | |||
|ontology_enrichment_disease=DOID:114!8.90e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;8.04e-16;2!DOID:178;1.27e-08;1!DOID:326;1.27e-08;1!DOID:3978;1.27e-08;1!DOID:3394;1.27e-08;1!DOID:5844;1.27e-08;1!DOID:1287;2.38e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.04e-16,2;DOID:178,1.27e-08,1;DOID:326,1.27e-08,1;DOID:3978,1.27e-08,1;DOID:3394,1.27e-08,1;DOID:5844,1.27e-08,1;DOID:1287,2.38e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.11e-22!115;UBERON:0003103!1.07e-12!69;UBERON:0004151!3.35e-12!3;UBERON:0003978!5.02e-12!3;UBERON:0009751!5.02e-12!3;UBERON:0000946!5.02e-12!3;UBERON:0002523!5.02e-12!3;UBERON:0005983!5.02e-12!3;UBERON:0002165!5.02e-12!3;UBERON:0002062!5.02e-12!3;UBERON:0007280!5.02e-12!3;UBERON:0007100!8.00e-10!27;UBERON:0001630!6.35e-09!2;UBERON:0005090!6.35e-09!2;UBERON:0002081!1.29e-08!2;UBERON:0002133!1.55e-08!2;UBERON:0000341!1.86e-08!2;UBERON:0003127!3.70e-08!2 | |ontology_enrichment_uberon=UBERON:0007023!5.11e-22!115;UBERON:0003103!1.07e-12!69;UBERON:0004151!3.35e-12!3;UBERON:0003978!5.02e-12!3;UBERON:0009751!5.02e-12!3;UBERON:0000946!5.02e-12!3;UBERON:0002523!5.02e-12!3;UBERON:0005983!5.02e-12!3;UBERON:0002165!5.02e-12!3;UBERON:0002062!5.02e-12!3;UBERON:0007280!5.02e-12!3;UBERON:0007100!8.00e-10!27;UBERON:0001630!6.35e-09!2;UBERON:0005090!6.35e-09!2;UBERON:0002081!1.29e-08!2;UBERON:0002133!1.55e-08!2;UBERON:0000341!1.86e-08!2;UBERON:0003127!3.70e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.46e-22;3!UBERON:0007100;2.79e-22;25!UBERON:0003978;3.02e-22;3!UBERON:0000946;3.02e-22;3!UBERON:0005090;4.13e-16;2!UBERON:0001630;4.13e-16;2!UBERON:0002081;1.67e-15;2!UBERON:0002133;2.50e-15;2!UBERON:0000341;3.71e-15;2!UBERON:0000948;2.00e-11;22!UBERON:0001723;5.58e-11;3!UBERON:0001033;5.58e-11;3!UBERON:0002426;6.03e-09;1!UBERON:0003831;6.03e-09;1!UBERON:0003898;6.03e-09;1!UBERON:0004830;6.03e-09;1!UBERON:0003830;6.03e-09;1!UBERON:0005175;6.03e-09;1!UBERON:0001774;6.03e-09;1!UBERON:0001103;6.03e-09;1!UBERON:0001389;7.01e-09;1!UBERON:0000026;7.01e-09;1!UBERON:0008784;7.01e-09;1!UBERON:0006058;7.01e-09;1!UBERON:0003663;7.01e-09;1!UBERON:0004256;7.01e-09;1!UBERON:0004708;7.01e-09;1!UBERON:0002101;7.01e-09;1!UBERON:0004709;7.01e-09;1!UBERON:0002529;7.01e-09;1!UBERON:0010538;7.01e-09;1!UBERON:0003661;7.01e-09;1!UBERON:0010890;7.01e-09;1!UBERON:0002471;7.01e-09;1!UBERON:0001383;7.01e-09;1!UBERON:0010758;7.01e-09;1!UBERON:0010707;7.01e-09;1!UBERON:0000978;7.01e-09;1!UBERON:0002103;7.01e-09;1!UBERON:0001665;7.01e-09;1!UBERON:0003823;7.01e-09;1!UBERON:0000154;7.01e-09;1!UBERON:0010709;7.01e-09;1!UBERON:0002084;8.15e-09;1!UBERON:0002082;8.15e-09;1!UBERON:0002079;1.02e-08;1!UBERON:0002146;1.14e-08;1!UBERON:0005623;1.14e-08;1!UBERON:0002135;1.53e-08;1!UBERON:0002134;1.71e-08;1!UBERON:0005208;1.71e-08;1!UBERON:0004145;1.71e-08;1!UBERON:0005946;1.71e-08;1!UBERON:0005965;1.71e-08;1!UBERON:0002078;1.71e-08;1!UBERON:0007029;1.91e-08;1!UBERON:0000989;2.37e-08;1!UBERON:0008811;2.37e-08;1!UBERON:0001134;1.47e-07;16!UBERON:0002036;1.47e-07;16!UBERON:0010313;4.95e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.36e-22,3;UBERON:0003978,3.02e-22,3;UBERON:0009751,3.02e-22,3;UBERON:0000946,3.02e-22,3;UBERON:0002523,3.02e-22,3;UBERON:0005983,3.02e-22,3;UBERON:0002165,3.02e-22,3;UBERON:0002062,3.02e-22,3;UBERON:0007280,3.02e-22,3;UBERON:0007100,1.54e-20,27;UBERON:0005090,4.13e-16,2;UBERON:0001630,4.13e-16,2;UBERON:0002081,1.67e-15,2;UBERON:0010227,1.67e-15,2;UBERON:0002133,2.41e-15,2;UBERON:0000341,3.46e-15,2;UBERON:0003103,2.75e-13,68;UBERON:0007023,1.89e-11,114;UBERON:0001723,5.59e-11,3;UBERON:0001033,5.59e-11,3;UBERON:0010056,5.59e-11,3;UBERON:0000948,1.95e-10,24;UBERON:0005498,1.95e-10,24;UBERON:0004140,1.95e-10,24;UBERON:0009881,1.95e-10,24;UBERON:0004141,1.95e-10,24;UBERON:0003084,1.95e-10,24;UBERON:0007005,1.95e-10,24;UBERON:0004139,1.95e-10,24;UBERON:0004291,1.95e-10,24;UBERON:0004797,7.50e-10,7;UBERON:0002426,6.03e-09,1;UBERON:0003831,6.03e-09,1;UBERON:0003898,6.03e-09,1;UBERON:0004830,6.03e-09,1;UBERON:0003830,6.03e-09,1;UBERON:0005175,6.03e-09,1;UBERON:0001774,6.03e-09,1;UBERON:0001103,6.03e-09,1;UBERON:0010084,6.03e-09,1;UBERON:0005418,7.01e-09,1;UBERON:0001389,7.01e-09,1;UBERON:0000026,7.01e-09,1;UBERON:0008784,7.01e-09,1;UBERON:0006058,7.01e-09,1;UBERON:0003663,7.01e-09,1;UBERON:0004256,7.01e-09,1;UBERON:0004708,7.01e-09,1;UBERON:0002101,7.01e-09,1;UBERON:0004709,7.01e-09,1;UBERON:0002529,7.01e-09,1;UBERON:0010538,7.01e-09,1;UBERON:0003661,7.01e-09,1;UBERON:0010890,7.01e-09,1;UBERON:0002471,7.01e-09,1;UBERON:0001383,7.01e-09,1;UBERON:0004357,7.01e-09,1;UBERON:0004347,7.01e-09,1;UBERON:0005420,7.01e-09,1;UBERON:0005732,7.01e-09,1;UBERON:0010758,7.01e-09,1;UBERON:0010707,7.01e-09,1;UBERON:0000978,7.01e-09,1;UBERON:0002103,7.01e-09,1;UBERON:0001665,7.01e-09,1;UBERON:0003823,7.01e-09,1;UBERON:0000154,7.01e-09,1;UBERON:0010709,7.01e-09,1;UBERON:0005733,7.01e-09,1;UBERON:0005730,7.01e-09,1;UBERON:0002084,7.56e-09,1;UBERON:0002082,7.56e-09,1;UBERON:0010226,7.56e-09,1;UBERON:0002079,1.02e-08,1;UBERON:0002146,1.18e-08,1;UBERON:0005623,1.18e-08,1;UBERON:0002135,1.48e-08,1;UBERON:0002134,1.71e-08,1;UBERON:0005208,1.71e-08,1;UBERON:0005946,1.71e-08,1;UBERON:0005965,1.71e-08,1;UBERON:0002078,1.71e-08,1;UBERON:0007029,1.98e-08,1;UBERON:0000989,2.13e-08,1;UBERON:0008811,2.13e-08,1;UBERON:0006258,2.13e-08,1;UBERON:0005876,2.13e-08,1;UBERON:0004874,2.13e-08,1;UBERON:0010313,4.95e-07,10;UBERON:0002342,4.95e-07,10;UBERON:0005062,4.95e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81990723562312,11.2288607765725,5.0251111720377,9.58459202395157,29.6165973214234,17.1842022230242,8.06201669840715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,15.0086018538407,17.8764831998667,0,0,0,0,0,0,0,0,0.732761168390412,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8394399990795,17.1446887449933,2.3196288626764,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,11.514635022653,1.66645102024618,0,0.0620747142958579,0,0.445530107947154,2.02117188958219,16.981906335963,40.0412962269779,0.5388164241167,0.502055437748735,3.65926392200615,0,0,0,0,7.03922827210363,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.1031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81990723562312,11.2288607765725,5.0251111720377,9.58459202395157,29.6165973214234,17.1842022230242,8.06201669840715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,15.0086018538407,17.8764831998667,0,0,0,0,0,0,0,0,0.732761168390412,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8394399990795,17.1446887449933,2.3196288626764,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,11.514635022653,1.66645102024618,0,0.0620747142958579,0,0.445530107947154,2.02117188958219,16.981906335963,40.0412962269779,0.5388164241167,0.502055437748735,3.65926392200615,0,0,0,0,7.03922827210363,0,0,0,0.603821380773079,0 | ||
|short_description=p4@SAMD4A | |short_description=p4@SAMD4A | ||
}} | }} |
Latest revision as of 15:01, 24 September 2015
Short description: | p4@SAMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SAMD4A_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 86bp_to_ENST00000555719_5end |
EntrezGene: | SAMD4A |
HGNC: | 23023 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 8.04e-16 | 2 |
vascular disease | 1.27e-08 | 1 |
ischemia | 1.27e-08 | 1 |
extrinsic cardiomyopathy | 1.27e-08 | 1 |
myocardial ischemia | 1.27e-08 | 1 |
myocardial infarction | 1.27e-08 | 1 |
cardiovascular system disease | 2.38e-08 | 4 |