FFCP PHASE1:Hg19::chr20:43954844..43954850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:43954844..43954850,- | |||
|coexpression_cluster_id=C204 | |||
|description=CAGE_peak_at_chr20:43954844..43954850,- | |description=CAGE_peak_at_chr20:43954844..43954850,- | ||
|id=chr20:43954844..43954850,- | |id=chr20:43954844..43954850,- | ||
|ontology_enrichment_celltype=CL:0000066!1.51e-09!254;CL:0002076!8.67e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.51e-09!254;CL:0002076!8.67e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000319;3.67e-23;1!CL:0000159;2.74e-12;2!CL:0000306;8.85e-07;4!CL:0002222;8.85e-07;4!CL:0002224;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.10e-23,1;CL:0000159,2.90e-12,2;CL:0000306,7.70e-07,4;CL:0002222,7.70e-07,4;CL:0002224,7.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.49e-23;1!UBERON:0005062;8.85e-07;4!UBERON:0007284;8.85e-07;4 | |||
|ontology_enrichment_disease=DOID:305!1.02e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.67e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,4.10e-23,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.67e-23;1!UBERON:0005208;3.67e-23;1!UBERON:0004145;3.67e-23;1!UBERON:0005946;3.67e-23;1!UBERON:0005965;3.67e-23;1!UBERON:0002078;3.67e-23;1!UBERON:0002081;2.74e-12;2!UBERON:0002133;2.74e-12;2!UBERON:0003978;1.26e-08;3!UBERON:0004151;1.26e-08;3!UBERON:0000946;1.26e-08;3!UBERON:0010077;8.85e-07;4!UBERON:0005389;8.85e-07;4!UBERON:0000484;8.85e-07;4!UBERON:0000965;8.85e-07;4!UBERON:0001803;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.62e-23,1;UBERON:0005208,2.62e-23,1;UBERON:0005946,2.62e-23,1;UBERON:0005965,2.62e-23,1;UBERON:0002078,2.62e-23,1;UBERON:0002081,2.32e-12,2;UBERON:0002133,2.32e-12,2;UBERON:0010227,2.32e-12,2;UBERON:0003978,1.12e-08,3;UBERON:0009751,1.12e-08,3;UBERON:0004151,1.12e-08,3;UBERON:0000946,1.12e-08,3;UBERON:0002523,1.12e-08,3;UBERON:0005983,1.12e-08,3;UBERON:0004145,1.12e-08,3;UBERON:0002165,1.12e-08,3;UBERON:0002062,1.12e-08,3;UBERON:0007280,1.12e-08,3;UBERON:0010077,7.70e-07,4;UBERON:0005389,7.70e-07,4;UBERON:0000484,7.70e-07,4;UBERON:0002546,7.70e-07,4;UBERON:0000965,7.70e-07,4;UBERON:0001803,7.70e-07,4;UBERON:0003073,7.70e-07,4;UBERON:0005426,7.70e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,1.21079900526674,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.724232594804119,0,0,0.283604451492204,0.221729397462564,0,0.0654895377488563,0,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0.538168907066586,0,0.211931901159562,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0,0,0.276149695926898,0,0,0,0.169560592310488,0.386521706326594,0.272746120590835,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0,0.234817388471643,0,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,0.831883446123229,0.535286966391485,0.315404830067869,0.468565659970853,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.362578348774867,0.601519410909855,0.184161977871793,0,0.364182336013434,0.262248829918848,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0.384380134730212,0,0.10115778085555,0,0,0.6970372701606,8.62494024493049,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0.316379424718726,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0.196498082026242,0,0,0.633322905892992,0,0,0,0.384888450902048,0,0,0.470719003883896,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0.227884111694002,0.23056390438806,0.359030577639089,0.977826347298073,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0.816164040795739,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.627865836814451,0,0.569219092059585,0,0.347119476670262,0.587954384486266,0,0,0.171986032471617,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0.397429223405979,0,0,0.0801588202515337,0,0.39961921916426,0.144090417154106,0,0.171594997861965,0.288109595976299,0.124252535565433,0.471388069233591,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0.837847203816763,0,1.43574604915363,0.399358000997982,0.429226048136571,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0.795229689809303,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0.226624183040251,0.439656701034247,0,0.387848869084652,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0.53168342911599,0,0,0,0,0,0.107410557042488,0,0.796191777397232,0.400027764663154,0,0,0,0.57785949122191,0.428883182749851,0,0.680117776536817,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0.38582807654183,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,1.2288645437686,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0.11552566615033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|short_description=p@chr20:43954844..43954850,- | |short_description=p@chr20:43954844..43954850,- | ||
}} | }} |
Latest revision as of 14:24, 28 July 2015
Short description: | p@chr20:43954844..43954850, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:43954844..43954850, - |
Coexpression cluster: | C204_Smooth_nasal_CD4_CD19_CD8_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.10e-23 | 1 |
seromucus secreting cell | 2.90e-12 | 2 |
crystallin accumulating cell | 7.70e-07 | 4 |
vertebrate lens cell | 7.70e-07 | 4 |
lens epithelial cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.62e-23 | 1 |
right atrium valve | 2.62e-23 | 1 |
outflow tract of atrium | 2.62e-23 | 1 |
outflow part of right atrium | 2.62e-23 | 1 |
right cardiac atrium | 2.62e-23 | 1 |
cardiac atrium | 2.32e-12 | 2 |
atrioventricular valve | 2.32e-12 | 2 |
future cardiac atrium | 2.32e-12 | 2 |
valve | 1.12e-08 | 3 |
cardiac mesenchyme | 1.12e-08 | 3 |
cardiac chamber | 1.12e-08 | 3 |
cardial valve | 1.12e-08 | 3 |
tunica intima | 1.12e-08 | 3 |
heart layer | 1.12e-08 | 3 |
outflow tract | 1.12e-08 | 3 |
endocardium | 1.12e-08 | 3 |
endocardial cushion | 1.12e-08 | 3 |
presumptive endocardium | 1.12e-08 | 3 |
cuboidal epithelium | 7.70e-07 | 4 |
transparent eye structure | 7.70e-07 | 4 |
simple cuboidal epithelium | 7.70e-07 | 4 |
cranial placode | 7.70e-07 | 4 |
lens of camera-type eye | 7.70e-07 | 4 |
epithelium of lens | 7.70e-07 | 4 |
lens placode | 7.70e-07 | 4 |
lens vesicle | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 4.10e-23 | 1 |