FFCP PHASE1:Hg19::chr21:45724075..45724081,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:45724075..45724081,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr21:45724075..45724081,+ | |description=CAGE_peak_at_chr21:45724075..45724081,+ | ||
|id=chr21:45724075..45724081,+ | |id=chr21:45724075..45724081,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.98e-131;3!UBERON:0005425;2.55e-98;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr21:45724075..45724081,+ | |short_description=p@chr21:45724075..45724081,+ | ||
}} | }} | ||
Latest revision as of 18:27, 28 July 2015
| Short description: | p@chr21:45724075..45724081, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr21:45724075..45724081, + |
| Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cranial nerve II | 2.55e-98 | 1 |
| cranial nerve | 2.55e-98 | 1 |
| nerve trunk | 2.55e-98 | 1 |
| nerve connecting eye with brain | 2.55e-98 | 1 |
| nerve | 2.55e-98 | 1 |
| retinal neural layer | 2.55e-98 | 1 |
| presumptive neural retina | 2.55e-98 | 1 |
| retina | 2.83e-66 | 6 |
| photoreceptor array | 2.83e-66 | 6 |
| posterior segment of eyeball | 2.83e-66 | 6 |
| neural tissue | 4.52e-50 | 2 |
| multi cell component structure | 4.52e-50 | 2 |
| neuron projection bundle | 4.52e-50 | 2 |
| layer of retina | 7.14e-26 | 4 |
| camera-type eye | 5.71e-21 | 20 |
| simple eye | 5.71e-21 | 20 |
| immature eye | 5.71e-21 | 20 |
| ocular region | 5.71e-21 | 20 |
| eyeball of camera-type eye | 5.71e-21 | 20 |
| optic cup | 5.71e-21 | 20 |
| optic vesicle | 5.71e-21 | 20 |
| eye primordium | 5.71e-21 | 20 |
| eye | 4.86e-20 | 21 |
| visual system | 4.86e-20 | 21 |
| face | 3.41e-19 | 22 |
| sense organ | 1.03e-17 | 24 |
| sensory system | 1.03e-17 | 24 |
| entire sense organ system | 1.03e-17 | 24 |
| ectodermal placode | 5.04e-14 | 31 |
| peripheral nervous system | 2.45e-12 | 8 |
| subdivision of head | 2.38e-09 | 49 |
| segmental subdivision of nervous system | 5.70e-09 | 13 |
| head | 2.46e-08 | 56 |
| anterior region of body | 1.20e-07 | 62 |
| craniocervical region | 1.20e-07 | 62 |
| pre-chordal neural plate | 1.20e-07 | 61 |