FFCP PHASE1:Hg19::chr12:109246515..109246556,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:109246515..109246556,-
|short_description=p@chr12:109246515..109246556,-
|description=CAGE_peak_at_chr12:109246515..109246556,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:109246515..109246556,- | |||
|description=CAGE_peak_at_chr12:109246515..109246556,- | |||
|id=chr12:109246515..109246556,- | |||
|ontology_enrichment_celltype=CL:0002139!1.12e-22!24;CL:0000115!7.90e-22!35;CL:0000071!2.68e-16!18;CL:0002546!2.68e-16!18;CL:0002078!3.41e-16!44;CL:0000222!1.89e-14!119;CL:0000213!1.45e-13!57;CL:0000215!1.45e-13!57;CL:0005020!5.16e-08!6;CL:0002138!5.16e-08!6;CL:0005022!5.16e-08!6;CL:1000413!1.75e-07!9;CL:0002543!2.25e-07!6;CL:0000359!7.29e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.12e-47;24!CL:0000115;3.79e-40;36!CL:0000071;2.60e-32;18!CL:0002078;2.07e-25;45!CL:0000213;2.13e-19;58!CL:0000215;2.13e-19;58!CL:0002138;1.78e-16;6!CL:0002543;6.00e-15;6!CL:1000413;2.24e-12;9!CL:0000359;4.32e-09;32!CL:0002144;4.34e-09;3!CL:0002618;1.77e-08;3!CL:0002595;9.89e-08;5!CL:0002188;1.72e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.24e-48,36;CL:0002139,1.99e-47,24;CL:0002078,1.17e-39,45;CL:0000071,1.04e-32,18;CL:0002546,1.04e-32,18;CL:0000213,5.93e-31,58;CL:0000215,5.93e-31,58;CL:0000222,1.62e-27,121;CL:0005020,1.84e-16,6;CL:0002138,1.84e-16,6;CL:0005022,1.84e-16,6;CL:0002543,5.46e-15,6;CL:1000413,1.12e-12,9;CL:0002321,1.06e-09,250;CL:0000359,1.61e-09,32;CL:0000076,3.20e-09,63;CL:0002144,4.31e-09,3;CL:0002618,2.02e-08,3;CL:0002595,9.60e-08,5;CL:0002188,1.28e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.60e-32;18!CL:0005022;1.78e-16;6!CL:0000222;9.14e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.54e-32!69;UBERON:0001981!4.30e-27!60;UBERON:0007500!4.30e-27!60;UBERON:0004537!4.30e-27!60;UBERON:0006965!4.30e-27!60;UBERON:0002049!1.86e-26!79;UBERON:0007798!1.86e-26!79;UBERON:0000025!2.72e-26!194;UBERON:0004872!5.66e-26!84;UBERON:0004111!3.01e-25!241;UBERON:0003914!3.06e-22!118;UBERON:0001009!5.22e-22!113;UBERON:0000477!2.43e-21!286;UBERON:0004535!3.00e-20!110;UBERON:0007023!1.33e-16!115;UBERON:0001637!2.38e-16!42;UBERON:0003509!2.38e-16!42;UBERON:0004572!2.38e-16!42;UBERON:0001986!2.68e-16!18;UBERON:0004638!2.68e-16!18;UBERON:0004852!2.68e-16!18;UBERON:0000483!2.69e-16!309;UBERON:0000119!3.36e-16!312;UBERON:0004573!1.24e-15!33;UBERON:0004571!1.24e-15!33;UBERON:0000490!1.20e-13!138;UBERON:0000487!2.76e-13!22;UBERON:0000947!2.69e-11!21;UBERON:0010191!2.69e-11!21;UBERON:0006914!7.46e-11!25;UBERON:0000481!5.60e-09!347;UBERON:0000467!1.18e-08!625;UBERON:0002465!1.37e-08!10;UBERON:0000480!1.47e-08!626;UBERON:0000468!3.60e-08!659;UBERON:0003915!1.75e-07!9;UBERON:0004700!1.75e-07!9;UBERON:0001917!1.75e-07!9;UBERON:0001473!3.17e-07!8;UBERON:0004536!3.17e-07!8;UBERON:0006558!3.17e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.60e-32;18!UBERON:0001986;2.60e-32;18!UBERON:0004852;2.60e-32;18!UBERON:0000487;1.34e-25;22!UBERON:0000055;6.53e-23;65!UBERON:0006914;5.57e-22;25!UBERON:0007500;2.00e-19;56!UBERON:0001981;2.00e-19;56!UBERON:0004537;2.00e-19;56!UBERON:0001637;7.97e-17;42!UBERON:0003509;7.97e-17;42!UBERON:0004572;7.97e-17;42!UBERON:0004573;1.48e-16;33!UBERON:0004571;1.48e-16;33!UBERON:0002049;1.91e-16;75!UBERON:0007798;1.91e-16;75!UBERON:0000490;1.22e-15;33!UBERON:0003914;3.97e-14;74!UBERON:0003915;2.24e-12;9!UBERON:0004700;2.24e-12;9!UBERON:0001917;2.24e-12;9!UBERON:0001473;4.11e-12;8!UBERON:0004536;4.11e-12;8!UBERON:0006558;4.11e-12;8!UBERON:0003513;9.05e-12;7!UBERON:0000025;1.73e-10;93!UBERON:0001638;1.11e-09;9!UBERON:0003920;1.11e-09;9!UBERON:0004582;1.11e-09;9!UBERON:0002465;1.70e-09;10!UBERON:0001009;1.92e-09;112!UBERON:0000947;2.32e-09;21!UBERON:0010191;2.32e-09;21!UBERON:0010523;4.34e-09;3!UBERON:0001915;4.34e-09;3!UBERON:0001982;4.34e-09;3!UBERON:0004535;2.06e-08;109!UBERON:0001280;3.74e-08;3!UBERON:0004647;3.74e-08;3!UBERON:0003834;9.89e-08;5!UBERON:0001533;9.89e-08;5!UBERON:0000353;8.59e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.16e-48,68;UBERON:0002049,1.18e-40,78;UBERON:0007798,1.18e-40,78;UBERON:0007500,5.41e-39,59;UBERON:0001981,5.41e-39,59;UBERON:0004537,5.41e-39,59;UBERON:0006965,5.41e-39,59;UBERON:0004872,3.79e-34,83;UBERON:0001009,8.40e-33,112;UBERON:0004638,1.04e-32,18;UBERON:0001986,1.04e-32,18;UBERON:0004852,1.04e-32,18;UBERON:0004535,2.70e-32,109;UBERON:0003914,1.80e-31,117;UBERON:0000487,6.43e-26,22;UBERON:0006914,2.94e-22,25;UBERON:0001637,1.81e-19,42;UBERON:0003509,1.81e-19,42;UBERON:0004572,1.81e-19,42;UBERON:0004573,1.51e-18,33;UBERON:0004571,1.51e-18,33;UBERON:0000025,5.72e-18,192;UBERON:0004111,2.28e-17,240;UBERON:0000490,3.27e-15,148;UBERON:0003915,1.12e-12,9;UBERON:0004700,1.12e-12,9;UBERON:0001917,1.12e-12,9;UBERON:0001473,4.19e-12,8;UBERON:0004536,4.19e-12,8;UBERON:0006558,4.19e-12,8;UBERON:0003081,5.86e-12,203;UBERON:0003513,9.16e-12,7;UBERON:0000483,9.05e-11,306;UBERON:0000119,1.56e-10,309;UBERON:0001638,1.05e-09,9;UBERON:0003920,1.05e-09,9;UBERON:0004582,1.05e-09,9;UBERON:0002465,1.73e-09,10;UBERON:0000947,1.76e-09,21;UBERON:0010191,1.76e-09,21;UBERON:0010523,4.31e-09,3;UBERON:0001915,4.31e-09,3;UBERON:0001982,4.31e-09,3;UBERON:0001280,3.82e-08,3;UBERON:0004647,3.82e-08,3;UBERON:0005171,3.82e-08,3;UBERON:0003834,9.60e-08,5;UBERON:0001533,9.60e-08,5;UBERON:0005256,1.74e-07,122;UBERON:0000353,7.38e-07,15;UBERON:0007503,8.78e-07,78 | |||
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| ||
|short_description=p@chr12:109246515..109246556,- | |||
}} | }} |
Latest revision as of 04:41, 24 July 2015
Short description: | p@chr12:109246515..109246556, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109246515..109246556, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.24e-48 | 36 |
endothelial cell of vascular tree | 1.99e-47 | 24 |
meso-epithelial cell | 1.17e-39 | 45 |
blood vessel endothelial cell | 1.04e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.04e-32 | 18 |
lining cell | 5.93e-31 | 58 |
barrier cell | 5.93e-31 | 58 |
mesodermal cell | 1.62e-27 | 121 |
lymphangioblast | 1.84e-16 | 6 |
endothelial cell of lymphatic vessel | 1.84e-16 | 6 |
vascular lymphangioblast | 1.84e-16 | 6 |
vein endothelial cell | 5.46e-15 | 6 |
endothelial cell of artery | 1.12e-12 | 9 |
embryonic cell | 1.06e-09 | 250 |
vascular associated smooth muscle cell | 1.61e-09 | 32 |
squamous epithelial cell | 3.20e-09 | 63 |
capillary endothelial cell | 4.31e-09 | 3 |
endothelial cell of umbilical vein | 2.02e-08 | 3 |
smooth muscle cell of the subclavian artery | 9.60e-08 | 5 |
glomerular endothelial cell | 1.28e-07 | 5 |