FFCP PHASE1:Hg19::chr19:10828724..10828779,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1785 | |EntrezGene=1785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2974 | |HGNC=2974 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4R9,P50570,E9PEQ4,A8K1B6,Q8N1K8 | |UniProt=F5H4R9,P50570,E9PEQ4,A8K1B6,Q8N1K8 | ||
|association_with_transcript=0bp_to_ENST00000314646,ENST00000355667,ENST00000359692,ENST00000389253,ENST00000408974,NM_001005360,NM_001005361,NM_001005362,NM_001190716,NM_004945,uc002mps.1,uc002mpt.1,uc002mpu.1,uc002mpv.1,uc010dxl.1_5end | |association_with_transcript=0bp_to_ENST00000314646,ENST00000355667,ENST00000359692,ENST00000389253,ENST00000408974,NM_001005360,NM_001005361,NM_001005362,NM_001190716,NM_004945,uc002mps.1,uc002mpt.1,uc002mpu.1,uc002mpv.1,uc010dxl.1_5end | ||
|cluster_id=chr19:10828724..10828779,+ | |||
|description=CAGE_peak_1_at_DNM2_5end | |description=CAGE_peak_1_at_DNM2_5end | ||
|id=chr19:10828724..10828779,+ | |id=chr19:10828724..10828779,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.85e-28!140;CL:0000988!3.67e-27!182;CL:0000037!3.85e-27!172;CL:0000566!3.85e-27!172;CL:0002032!5.87e-25!165;CL:0000837!5.87e-25!165;CL:0000766!3.84e-23!76;CL:0000763!9.86e-22!112;CL:0000049!9.86e-22!112;CL:0002087!6.03e-21!119;CL:0002031!6.08e-21!124;CL:0000839!8.20e-19!70;CL:0000557!1.07e-18!71;CL:0002194!4.84e-18!63;CL:0000576!4.84e-18!63;CL:0000040!4.84e-18!63;CL:0000559!4.84e-18!63;CL:0002009!1.26e-17!65;CL:0002057!3.46e-17!42;CL:0000860!2.91e-15!45;CL:1000497!1.43e-07!18;CL:0002518!1.43e-07!18;CL:1000449!4.53e-07!16 | |ontology_enrichment_celltype=CL:0000738!7.85e-28!140;CL:0000988!3.67e-27!182;CL:0000037!3.85e-27!172;CL:0000566!3.85e-27!172;CL:0002032!5.87e-25!165;CL:0000837!5.87e-25!165;CL:0000766!3.84e-23!76;CL:0000763!9.86e-22!112;CL:0000049!9.86e-22!112;CL:0002087!6.03e-21!119;CL:0002031!6.08e-21!124;CL:0000839!8.20e-19!70;CL:0000557!1.07e-18!71;CL:0002194!4.84e-18!63;CL:0000576!4.84e-18!63;CL:0000040!4.84e-18!63;CL:0000559!4.84e-18!63;CL:0002009!1.26e-17!65;CL:0002057!3.46e-17!42;CL:0000860!2.91e-15!45;CL:1000497!1.43e-07!18;CL:0002518!1.43e-07!18;CL:1000449!4.53e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.38e-13;33!CL:0002057;3.38e-13;33!CL:0000473;3.94e-13;39!CL:0000234;3.94e-13;39!CL:0000576;1.55e-11;48!CL:0000766;1.88e-10;69!CL:1000497;3.76e-08;17!CL:0002518;3.76e-08;17!CL:1000449;1.13e-07;15!CL:0000763;1.42e-07;100!CL:0002087;6.67e-07;104!CL:0000738;7.19e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.40e-29,136;CL:0000037,1.27e-28,168;CL:0000988,1.75e-28,177;CL:0002032,2.14e-26,161;CL:0000837,2.14e-26,161;CL:0000766,1.43e-25,72;CL:0000763,1.86e-23,108;CL:0000049,1.86e-23,108;CL:0002087,1.49e-22,115;CL:0002031,1.68e-22,120;CL:0000839,5.05e-21,66;CL:0000557,7.14e-21,67;CL:0002194,2.29e-20,59;CL:0000576,2.29e-20,59;CL:0000040,2.29e-20,59;CL:0000559,2.29e-20,59;CL:0002009,7.45e-20,61;CL:0000473,2.49e-19,48;CL:0000234,2.49e-19,48;CL:0000860,3.46e-17,42;CL:0002057,3.46e-17,42;CL:1000497,3.68e-08,17;CL:0002518,3.68e-08,17;CL:1000449,1.11e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-12;42!CL:0000049;2.21e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.21e-21!102;UBERON:0003061!3.21e-21!102;UBERON:0002193!6.07e-21!112;UBERON:0003081!1.17e-19!216;UBERON:0002371!9.60e-17!80;UBERON:0001474!6.19e-15!86;UBERON:0002405!2.05e-14!115;UBERON:0004765!2.34e-09!101;UBERON:0001434!2.34e-09!101;UBERON:0004211!4.53e-07!16;UBERON:0001285!4.53e-07!16;UBERON:0007684!4.53e-07!16;UBERON:0003220!4.53e-07!16;UBERON:0004208!4.53e-07!16 | |ontology_enrichment_uberon=UBERON:0002390!3.21e-21!102;UBERON:0003061!3.21e-21!102;UBERON:0002193!6.07e-21!112;UBERON:0003081!1.17e-19!216;UBERON:0002371!9.60e-17!80;UBERON:0001474!6.19e-15!86;UBERON:0002405!2.05e-14!115;UBERON:0004765!2.34e-09!101;UBERON:0001434!2.34e-09!101;UBERON:0004211!4.53e-07!16;UBERON:0001285!4.53e-07!16;UBERON:0007684!4.53e-07!16;UBERON:0003220!4.53e-07!16;UBERON:0004208!4.53e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.13e-07;15!UBERON:0004819;1.13e-07;15!UBERON:0001285;1.13e-07;15!UBERON:0007684;1.13e-07;15!UBERON:0006554;1.69e-07;30!UBERON:0001008;1.69e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.90e-23,98;UBERON:0003061,4.90e-23,98;UBERON:0002193,1.27e-22,108;UBERON:0002405,4.24e-19,93;UBERON:0002371,1.43e-18,76;UBERON:0003081,6.54e-18,203;UBERON:0001474,1.60e-16,82;UBERON:0004765,4.49e-13,90;UBERON:0001434,1.63e-09,100;UBERON:0004211,1.11e-07,15;UBERON:0009773,1.11e-07,15;UBERON:0001231,1.11e-07,15;UBERON:0001285,1.11e-07,15;UBERON:0007684,1.11e-07,15;UBERON:0004208,1.11e-07,15;UBERON:0006555,7.09e-07,16;UBERON:0004819,7.09e-07,16 | |||
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| ||
|short_description=p1@DNM2 | |short_description=p1@DNM2 | ||
}} | }} |
Latest revision as of 02:57, 25 September 2015
Short description: | p1@DNM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000314646, ENST00000355667, ENST00000359692, ENST00000389253, ENST00000408974, NM_001005360, NM_001005361, NM_001005362, NM_001190716, NM_004945, uc002mps.1, uc002mpt.1, uc002mpu.1, uc002mpv.1, uc010dxl.1_5end |
EntrezGene: | DNM2 |
HGNC: | 2974 |
UniProt: | F5H4R9P50570E9PEQ4A8K1B6Q8N1K8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.40e-29 | 136 |
hematopoietic stem cell | 1.27e-28 | 168 |
hematopoietic cell | 1.75e-28 | 177 |
hematopoietic oligopotent progenitor cell | 2.14e-26 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-26 | 161 |
myeloid leukocyte | 1.43e-25 | 72 |
myeloid cell | 1.86e-23 | 108 |
common myeloid progenitor | 1.86e-23 | 108 |
nongranular leukocyte | 1.49e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.68e-22 | 120 |
myeloid lineage restricted progenitor cell | 5.05e-21 | 66 |
granulocyte monocyte progenitor cell | 7.14e-21 | 67 |
monopoietic cell | 2.29e-20 | 59 |
monocyte | 2.29e-20 | 59 |
monoblast | 2.29e-20 | 59 |
promonocyte | 2.29e-20 | 59 |
macrophage dendritic cell progenitor | 7.45e-20 | 61 |
defensive cell | 2.49e-19 | 48 |
phagocyte | 2.49e-19 | 48 |
classical monocyte | 3.46e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.46e-17 | 42 |
kidney cell | 3.68e-08 | 17 |
kidney epithelial cell | 3.68e-08 | 17 |
epithelial cell of nephron | 1.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.90e-23 | 98 |
blood island | 4.90e-23 | 98 |
hemolymphoid system | 1.27e-22 | 108 |
immune system | 4.24e-19 | 93 |
bone marrow | 1.43e-18 | 76 |
lateral plate mesoderm | 6.54e-18 | 203 |
bone element | 1.60e-16 | 82 |
skeletal element | 4.49e-13 | 90 |
skeletal system | 1.63e-09 | 100 |
nephron epithelium | 1.11e-07 | 15 |
renal tubule | 1.11e-07 | 15 |
nephron tubule | 1.11e-07 | 15 |
nephron | 1.11e-07 | 15 |
uriniferous tubule | 1.11e-07 | 15 |
nephrogenic mesenchyme | 1.11e-07 | 15 |
excretory tube | 7.09e-07 | 16 |
kidney epithelium | 7.09e-07 | 16 |