FFCP PHASE1:Hg19::chr1:183441005..183441026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9887 | |EntrezGene=9887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16792 | |HGNC=16792 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEK3 | |UniProt=E9PEK3 | ||
|association_with_transcript=-324bp_to_ENST00000440812_5end | |association_with_transcript=-324bp_to_ENST00000440812_5end | ||
|cluster_id=chr1:183441005..183441026,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_10_at_SMG7_5end | |description=CAGE_peak_10_at_SMG7_5end | ||
|id=chr1:183441005..183441026,+ | |id=chr1:183441005..183441026,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;2.73e-29;1!CL:0000557;2.73e-29;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10!UBERON:0005062;2.35e-08;4!UBERON:0007284;2.35e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.00e-10!34;UBERON:0002020!2.84e-10!34;UBERON:0003528!2.84e-10!34;UBERON:0001869!4.59e-10!32;UBERON:0002791!1.16e-09!33;UBERON:0002780!9.45e-09!41;UBERON:0001890!9.45e-09!41;UBERON:0006240!9.45e-09!41;UBERON:0003080!2.11e-08!42;UBERON:0002619!2.56e-08!22;UBERON:0000200!6.52e-08!6;UBERON:0001049!3.03e-07!57;UBERON:0005068!3.03e-07!57;UBERON:0006241!3.03e-07!57;UBERON:0007135!3.03e-07!57;UBERON:0000955!5.46e-07!69;UBERON:0006238!5.46e-07!69;UBERON:0000956!6.66e-07!25;UBERON:0000203!6.66e-07!25;UBERON:0002616!8.85e-07!59 | |ontology_enrichment_uberon=UBERON:0001893!2.00e-10!34;UBERON:0002020!2.84e-10!34;UBERON:0003528!2.84e-10!34;UBERON:0001869!4.59e-10!32;UBERON:0002791!1.16e-09!33;UBERON:0002780!9.45e-09!41;UBERON:0001890!9.45e-09!41;UBERON:0006240!9.45e-09!41;UBERON:0003080!2.11e-08!42;UBERON:0002619!2.56e-08!22;UBERON:0000200!6.52e-08!6;UBERON:0001049!3.03e-07!57;UBERON:0005068!3.03e-07!57;UBERON:0006241!3.03e-07!57;UBERON:0007135!3.03e-07!57;UBERON:0000955!5.46e-07!69;UBERON:0006238!5.46e-07!69;UBERON:0000956!6.66e-07!25;UBERON:0000203!6.66e-07!25;UBERON:0002616!8.85e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.73e-29;1!UBERON:0005208;2.73e-29;1!UBERON:0004145;2.73e-29;1!UBERON:0005946;2.73e-29;1!UBERON:0005965;2.73e-29;1!UBERON:0002078;2.73e-29;1!UBERON:0002081;2.21e-15;2!UBERON:0002133;2.21e-15;2!UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0003978;1.04e-10;3!UBERON:0004151;1.04e-10;3!UBERON:0000946;1.04e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.37e-29,1;UBERON:0005208,2.37e-29,1;UBERON:0005946,2.37e-29,1;UBERON:0005965,2.37e-29,1;UBERON:0002078,2.37e-29,1;UBERON:0002081,2.05e-15,2;UBERON:0002133,2.05e-15,2;UBERON:0010227,2.05e-15,2;UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0003978,9.90e-11,3;UBERON:0009751,9.90e-11,3;UBERON:0004151,9.90e-11,3;UBERON:0000946,9.90e-11,3;UBERON:0002523,9.90e-11,3;UBERON:0005983,9.90e-11,3;UBERON:0004145,9.90e-11,3;UBERON:0002165,9.90e-11,3;UBERON:0002062,9.90e-11,3;UBERON:0007280,9.90e-11,3 | |||
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| ||
|short_description=p10@SMG7 | |short_description=p10@SMG7 | ||
}} | }} |
Latest revision as of 03:15, 19 September 2015
Short description: | p10@SMG7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SMG7_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -324bp_to_ENST00000440812_5end |
EntrezGene: | SMG7 |
HGNC: | 16792 |
UniProt: | E9PEK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.37e-29 | 1 |
right atrium valve | 2.37e-29 | 1 |
outflow tract of atrium | 2.37e-29 | 1 |
outflow part of right atrium | 2.37e-29 | 1 |
right cardiac atrium | 2.37e-29 | 1 |
cardiac atrium | 2.05e-15 | 2 |
atrioventricular valve | 2.05e-15 | 2 |
future cardiac atrium | 2.05e-15 | 2 |
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
valve | 9.90e-11 | 3 |
cardiac mesenchyme | 9.90e-11 | 3 |
cardiac chamber | 9.90e-11 | 3 |
cardial valve | 9.90e-11 | 3 |
tunica intima | 9.90e-11 | 3 |
heart layer | 9.90e-11 | 3 |
outflow tract | 9.90e-11 | 3 |
endocardium | 9.90e-11 | 3 |
endocardial cushion | 9.90e-11 | 3 |
presumptive endocardium | 9.90e-11 | 3 |