FFCP PHASE1:Hg19::chr2:117017738..117017741,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:117017738..117017741,- | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr2:117017738..117017741,- | |description=CAGE_peak_at_chr2:117017738..117017741,- | ||
|id=chr2:117017738..117017741,- | |id=chr2:117017738..117017741,- | ||
|ontology_enrichment_celltype=CL:0002127!3.74e-10!1;CL:0000914!3.74e-10!1;CL:0000911!3.74e-10!1;CL:0000814!3.74e-10!1;CL:0002042!3.74e-10!1;CL:0002039!3.74e-10!1;CL:0002040!3.74e-10!1;CL:0002041!3.74e-10!1;CL:0002557!9.70e-10!1 | |ontology_enrichment_celltype=CL:0002127!3.74e-10!1;CL:0000914!3.74e-10!1;CL:0000911!3.74e-10!1;CL:0000814!3.74e-10!1;CL:0002042!3.74e-10!1;CL:0002039!3.74e-10!1;CL:0002040!3.74e-10!1;CL:0002041!3.74e-10!1;CL:0002557!9.70e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.23e-66;1!CL:0000911;1.23e-66;1!CL:0000814;1.23e-66;1!CL:0000047;5.96e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.23e-66,1;CL:0000914,1.23e-66,1;CL:0000911,1.23e-66,1;CL:0000814,1.23e-66,1;CL:0002042,1.23e-66,1;CL:0002039,1.23e-66,1;CL:0002040,1.23e-66,1;CL:0002041,1.23e-66,1;CL:0000893,3.61e-34,2;CL:0002489,3.61e-34,2;CL:0000809,3.61e-34,2;CL:0000808,3.61e-34,2;CL:0000894,3.61e-34,2;CL:0000806,3.61e-34,2;CL:0000807,3.61e-34,2;CL:0000805,3.61e-34,2;CL:0002425,3.61e-34,2;CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.34e-66;1!CL:0002425;3.61e-34;2!UBERON:0003056;3.66e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005162!1.13e-17!2;UBERON:0000122!1.13e-17!2;UBERON:0000941!4.09e-10!1;UBERON:0004904!4.09e-10!1;UBERON:0002464!4.09e-10!1;UBERON:0001021!4.09e-10!1;UBERON:0001785!4.09e-10!1;UBERON:0002336!2.67e-09!1;UBERON:0001018!2.67e-09!1;UBERON:0002473!2.67e-09!1;UBERON:0005340!2.67e-09!1;UBERON:0002316!2.67e-09!1;UBERON:0003544!2.67e-09!1;UBERON:0001020!2.67e-09!1;UBERON:0005970!2.67e-09!1;UBERON:0002437!2.67e-09!1;UBERON:0006562!2.00e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.34e-66;1!UBERON:0001785;3.34e-66;1!UBERON:0002464;3.34e-66;1!UBERON:0004904;3.34e-66;1!UBERON:0001021;3.34e-66;1!UBERON:0003714;5.96e-34;2!UBERON:0005162;5.96e-34;2!UBERON:0000122;5.96e-34;2!UBERON:0000010;1.16e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0003714,5.04e-34,2;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0001781,8.69e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000010,1.12e-08,8;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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|short_description=p@chr2:117017738..117017741,- | |short_description=p@chr2:117017738..117017741,- | ||
}} | }} |
Latest revision as of 23:46, 28 July 2015
Short description: | p@chr2:117017738..117017741, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:117017738..117017741, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.23e-66 | 1 |
immature NK T cell | 1.23e-66 | 1 |
effector T cell | 1.23e-66 | 1 |
mature NK T cell | 1.23e-66 | 1 |
immature NK T cell stage IV | 1.23e-66 | 1 |
immature NK T cell stage I | 1.23e-66 | 1 |
immature NK T cell stage II | 1.23e-66 | 1 |
immature NK T cell stage III | 1.23e-66 | 1 |
thymocyte | 3.61e-34 | 2 |
double negative thymocyte | 3.61e-34 | 2 |
double-positive, alpha-beta thymocyte | 3.61e-34 | 2 |
DN4 thymocyte | 3.61e-34 | 2 |
DN1 thymic pro-T cell | 3.61e-34 | 2 |
DN2 thymocyte | 3.61e-34 | 2 |
DN3 thymocyte | 3.61e-34 | 2 |
immature single positive thymocyte | 3.61e-34 | 2 |
early T lineage precursor | 3.61e-34 | 2 |
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.39e-66 | 1 |
cranial nerve | 2.39e-66 | 1 |
nerve trunk | 2.39e-66 | 1 |
nerve connecting eye with brain | 2.39e-66 | 1 |
nerve | 2.39e-66 | 1 |
retinal neural layer | 2.39e-66 | 1 |
presumptive neural retina | 2.39e-66 | 1 |
neural tissue | 5.04e-34 | 2 |
multi cell component structure | 5.04e-34 | 2 |
neuron projection bundle | 5.04e-34 | 2 |
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
layer of retina | 8.69e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
peripheral nervous system | 1.12e-08 | 8 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |