FFCP PHASE1:Hg19::chr7:99987647..99987671,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:99987647..99987671,+ | |||
|coexpression_cluster_id=C469 | |||
|description=CAGE_peak_at_chr7:99987647..99987671,+ | |description=CAGE_peak_at_chr7:99987647..99987671,+ | ||
|id=chr7:99987647..99987671,+ | |id=chr7:99987647..99987671,+ | ||
|ontology_enrichment_celltype=CL:0002194!7.75e-58!63;CL:0000576!7.75e-58!63;CL:0000040!7.75e-58!63;CL:0000559!7.75e-58!63;CL:0002057!1.77e-57!42;CL:0000766!2.93e-56!76;CL:0002009!1.59e-55!65;CL:0000860!1.19e-52!45;CL:0000839!2.51e-50!70;CL:0000557!2.25e-49!71;CL:0002087!2.48e-44!119;CL:0000738!1.92e-43!140;CL:0002031!4.73e-37!124;CL:0000763!2.37e-36!112;CL:0000049!2.37e-36!112;CL:0000037!1.50e-34!172;CL:0000566!1.50e-34!172;CL:0002032!6.15e-32!165;CL:0000837!6.15e-32!165;CL:0000988!2.26e-31!182;CL:0002393!1.40e-11!9;CL:0002397!1.40e-11!9;CL:0000134!1.22e-09!358;CL:0002320!4.66e-09!365;CL:0000219!1.98e-07!390 | |ontology_enrichment_celltype=CL:0002194!7.75e-58!63;CL:0000576!7.75e-58!63;CL:0000040!7.75e-58!63;CL:0000559!7.75e-58!63;CL:0002057!1.77e-57!42;CL:0000766!2.93e-56!76;CL:0002009!1.59e-55!65;CL:0000860!1.19e-52!45;CL:0000839!2.51e-50!70;CL:0000557!2.25e-49!71;CL:0002087!2.48e-44!119;CL:0000738!1.92e-43!140;CL:0002031!4.73e-37!124;CL:0000763!2.37e-36!112;CL:0000049!2.37e-36!112;CL:0000037!1.50e-34!172;CL:0000566!1.50e-34!172;CL:0002032!6.15e-32!165;CL:0000837!6.15e-32!165;CL:0000988!2.26e-31!182;CL:0002393!1.40e-11!9;CL:0002397!1.40e-11!9;CL:0000134!1.22e-09!358;CL:0002320!4.66e-09!365;CL:0000219!1.98e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.89e-77;39!CL:0000234;6.89e-77;39!CL:0000860;2.39e-71;33!CL:0002057;2.39e-71;33!CL:0000576;2.66e-66;48!CL:0000766;6.23e-52;69!CL:0000763;5.64e-22;100!CL:0000235;5.56e-20;6!CL:0002087;2.11e-16;104!CL:0000738;4.97e-16;136!CL:0002393;9.51e-14;6!CL:0002397;9.51e-14;6!CL:0000775;1.38e-11;3!CL:0000875;8.23e-11;3!CL:0002396;8.23e-11;3!CL:0002619;3.88e-10;3!CL:0000988;3.37e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.36e-121,48;CL:0000234,3.36e-121,48;CL:0002194,6.74e-114,59;CL:0000576,6.74e-114,59;CL:0000040,6.74e-114,59;CL:0000559,6.74e-114,59;CL:0002009,7.25e-110,61;CL:0000766,1.71e-105,72;CL:0000860,3.35e-102,42;CL:0002057,3.35e-102,42;CL:0000839,7.71e-101,66;CL:0000557,3.42e-99,67;CL:0000763,7.28e-67,108;CL:0000049,7.28e-67,108;CL:0002087,8.93e-59,115;CL:0000738,1.35e-55,136;CL:0002031,2.95e-53,120;CL:0002032,4.02e-43,161;CL:0000837,4.02e-43,161;CL:0000037,7.55e-43,168;CL:0000988,4.35e-40,177;CL:0002393,9.42e-23,9;CL:0002397,9.42e-23,9;CL:0000235,1.12e-19,6;CL:0000134,3.18e-14,354;CL:0002320,1.01e-13,361;CL:0000219,5.93e-12,386;CL:0000775,1.09e-11,3;CL:0000875,7.46e-11,3;CL:0002396,7.46e-11,3;CL:0002619,5.73e-10,3;CL:0000048,8.51e-10,427;CL:0000723,1.69e-09,433;CL:0000034,4.08e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-72;42!CL:0000049;4.87e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-56!102;UBERON:0003061!1.26e-56!102;UBERON:0002193!2.40e-51!112;UBERON:0002371!6.99e-42!80;UBERON:0001474!9.13e-38!86;UBERON:0002405!2.65e-32!115;UBERON:0004765!6.05e-31!101;UBERON:0001434!6.05e-31!101;UBERON:0003081!3.53e-17!216;UBERON:0002204!8.75e-14!167;UBERON:0000178!1.23e-11!15;UBERON:0000179!1.23e-11!15;UBERON:0000463!1.23e-11!15;UBERON:0007023!8.26e-09!115;UBERON:0002384!1.10e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-16;15!UBERON:0000179;2.03e-16;15!UBERON:0000463;2.03e-16;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.29e-95,98;UBERON:0003061,1.29e-95,98;UBERON:0002371,2.67e-86,76;UBERON:0002193,9.37e-86,108;UBERON:0001474,2.94e-79,82;UBERON:0004765,2.60e-71,90;UBERON:0002405,1.11e-68,93;UBERON:0001434,3.79e-63,100;UBERON:0003081,3.07e-40,203;UBERON:0002204,1.62e-33,167;UBERON:0000926,1.13e-21,315;UBERON:0004120,1.13e-21,315;UBERON:0006603,1.13e-21,315;UBERON:0000178,1.60e-16,15;UBERON:0000179,1.60e-16,15;UBERON:0000463,1.60e-16,15;UBERON:0002384,4.90e-13,371;UBERON:0000923,2.90e-07,560;UBERON:0010316,2.90e-07,560;UBERON:0005291,2.90e-07,560;UBERON:0006598,2.90e-07,560;UBERON:0010317,2.90e-07,560;UBERON:0002532,2.90e-07,560;UBERON:0002050,3.99e-07,564 | |||
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|short_description=p@chr7:99987647..99987671,+ | |short_description=p@chr7:99987647..99987671,+ | ||
}} | }} |
Latest revision as of 13:22, 31 July 2015
Short description: | p@chr7:99987647..99987671, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:99987647..99987671, + |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.29e-95 | 98 |
blood island | 1.29e-95 | 98 |
bone marrow | 2.67e-86 | 76 |
hemolymphoid system | 9.37e-86 | 108 |
bone element | 2.94e-79 | 82 |
skeletal element | 2.60e-71 | 90 |
immune system | 1.11e-68 | 93 |
skeletal system | 3.79e-63 | 100 |
lateral plate mesoderm | 3.07e-40 | 203 |
musculoskeletal system | 1.62e-33 | 167 |
mesoderm | 1.13e-21 | 315 |
mesoderm-derived structure | 1.13e-21 | 315 |
presumptive mesoderm | 1.13e-21 | 315 |
blood | 1.60e-16 | 15 |
haemolymphatic fluid | 1.60e-16 | 15 |
organism substance | 1.60e-16 | 15 |
connective tissue | 4.90e-13 | 371 |
germ layer | 2.90e-07 | 560 |
germ layer / neural crest | 2.90e-07 | 560 |
embryonic tissue | 2.90e-07 | 560 |
presumptive structure | 2.90e-07 | 560 |
germ layer / neural crest derived structure | 2.90e-07 | 560 |
epiblast (generic) | 2.90e-07 | 560 |
embryonic structure | 3.99e-07 | 564 |