FFCP PHASE1:Hg19::chr14:70236772..70236813,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:70236772..70236813,+
|short_description=p4@SRSF5
|description=CAGE_peak_4_at_SRSF5_5end
|association_with_transcript=-351bp_to_ENST00000556647_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6430 | |EntrezGene=6430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10787 | |HGNC=10787 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-351bp_to_ENST00000556647_5end | |||
|cluster_id=chr14:70236772..70236813,+ | |||
|description=CAGE_peak_4_at_SRSF5_5end | |||
|id=chr14:70236772..70236813,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.91e-20!140;CL:0000037!1.48e-19!172;CL:0000566!1.48e-19!172;CL:0002087!6.36e-19!119;CL:0002032!1.73e-18!165;CL:0000837!1.73e-18!165;CL:0000860!2.88e-18!45;CL:0002057!3.12e-18!42;CL:0002031!7.01e-18!124;CL:0000988!4.41e-17!182;CL:0000766!3.70e-15!76;CL:0002009!1.79e-13!65;CL:0002194!2.49e-13!63;CL:0000576!2.49e-13!63;CL:0000040!2.49e-13!63;CL:0000559!2.49e-13!63;CL:0000839!3.08e-13!70;CL:0000763!5.26e-13!112;CL:0000049!5.26e-13!112;CL:0000557!3.08e-12!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-14;33!CL:0002057;1.34e-14;33!CL:0000473;8.77e-11;39!CL:0000234;8.77e-11;39!CL:0000576;1.24e-10;48!CL:0000766;1.98e-07;69!CL:0002087;2.16e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.25e-21,136;CL:0002087,4.37e-20,115;CL:0000037,9.21e-20,168;CL:0000860,1.54e-19,42;CL:0002057,1.54e-19,42;CL:0002031,3.83e-19,120;CL:0002032,1.88e-18,161;CL:0000837,1.88e-18,161;CL:0000988,9.97e-18,177;CL:0000473,1.32e-17,48;CL:0000234,1.32e-17,48;CL:0000766,6.82e-16,72;CL:0002009,4.34e-14,61;CL:0000839,4.93e-14,66;CL:0002194,6.08e-14,59;CL:0000576,6.08e-14,59;CL:0000040,6.08e-14,59;CL:0000559,6.08e-14,59;CL:0000557,3.84e-13,67;CL:0000763,1.88e-12,108;CL:0000049,1.88e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.64e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.63e-10!115;UBERON:0001049!2.88e-10!57;UBERON:0005068!2.88e-10!57;UBERON:0006241!2.88e-10!57;UBERON:0007135!2.88e-10!57;UBERON:0002371!3.70e-09!80;UBERON:0001474!7.76e-09!86;UBERON:0003080!1.46e-08!42;UBERON:0002780!1.64e-08!41;UBERON:0001890!1.64e-08!41;UBERON:0006240!1.64e-08!41;UBERON:0002390!1.94e-08!102;UBERON:0003061!1.94e-08!102;UBERON:0002020!9.32e-08!34;UBERON:0003528!9.32e-08!34;UBERON:0000955!1.03e-07!69;UBERON:0006238!1.03e-07!69;UBERON:0002616!2.48e-07!59;UBERON:0001017!3.93e-07!82;UBERON:0002193!7.18e-07!112;UBERON:0002791!8.26e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.76e-10,76;UBERON:0001049,2.87e-10,56;UBERON:0005068,2.87e-10,56;UBERON:0006241,2.87e-10,56;UBERON:0007135,2.87e-10,56;UBERON:0001474,8.94e-10,82;UBERON:0007023,1.12e-09,114;UBERON:0002390,3.95e-09,98;UBERON:0003061,3.95e-09,98;UBERON:0000073,4.05e-09,53;UBERON:0002616,4.05e-09,53;UBERON:0002780,1.69e-08,41;UBERON:0001890,1.69e-08,41;UBERON:0003080,1.69e-08,41;UBERON:0006240,1.69e-08,41;UBERON:0003528,6.56e-08,34;UBERON:0002020,6.56e-08,34;UBERON:0002346,1.03e-07,86;UBERON:0002193,2.53e-07,108;UBERON:0000955,2.70e-07,68;UBERON:0006238,2.70e-07,68;UBERON:0004765,2.75e-07,90;UBERON:0002405,2.88e-07,93;UBERON:0003075,4.52e-07,82;UBERON:0007284,4.52e-07,82;UBERON:0002791,5.70e-07,32;UBERON:0001017,7.30e-07,81 | |||
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| ||
|short_description=p4@SRSF5 | |||
}} | }} |
Latest revision as of 19:43, 15 September 2015
Short description: | p4@SRSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SRSF5_5end |
Coexpression cluster: | NA |
Association with transcript: | -351bp_to_ENST00000556647_5end |
EntrezGene: | SRSF5 |
HGNC: | 10787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.25e-21 | 136 |
nongranular leukocyte | 4.37e-20 | 115 |
hematopoietic stem cell | 9.21e-20 | 168 |
classical monocyte | 1.54e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-19 | 42 |
hematopoietic lineage restricted progenitor cell | 3.83e-19 | 120 |
hematopoietic oligopotent progenitor cell | 1.88e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-18 | 161 |
hematopoietic cell | 9.97e-18 | 177 |
defensive cell | 1.32e-17 | 48 |
phagocyte | 1.32e-17 | 48 |
myeloid leukocyte | 6.82e-16 | 72 |
macrophage dendritic cell progenitor | 4.34e-14 | 61 |
myeloid lineage restricted progenitor cell | 4.93e-14 | 66 |
monopoietic cell | 6.08e-14 | 59 |
monocyte | 6.08e-14 | 59 |
monoblast | 6.08e-14 | 59 |
promonocyte | 6.08e-14 | 59 |
granulocyte monocyte progenitor cell | 3.84e-13 | 67 |
myeloid cell | 1.88e-12 | 108 |
common myeloid progenitor | 1.88e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.76e-10 | 76 |
neural tube | 2.87e-10 | 56 |
neural rod | 2.87e-10 | 56 |
future spinal cord | 2.87e-10 | 56 |
neural keel | 2.87e-10 | 56 |
bone element | 8.94e-10 | 82 |
adult organism | 1.12e-09 | 114 |
hematopoietic system | 3.95e-09 | 98 |
blood island | 3.95e-09 | 98 |
regional part of nervous system | 4.05e-09 | 53 |
regional part of brain | 4.05e-09 | 53 |
regional part of forebrain | 1.69e-08 | 41 |
forebrain | 1.69e-08 | 41 |
anterior neural tube | 1.69e-08 | 41 |
future forebrain | 1.69e-08 | 41 |
brain grey matter | 6.56e-08 | 34 |
gray matter | 6.56e-08 | 34 |
neurectoderm | 1.03e-07 | 86 |
hemolymphoid system | 2.53e-07 | 108 |
brain | 2.70e-07 | 68 |
future brain | 2.70e-07 | 68 |
skeletal element | 2.75e-07 | 90 |
immune system | 2.88e-07 | 93 |
neural plate | 4.52e-07 | 82 |
presumptive neural plate | 4.52e-07 | 82 |
regional part of telencephalon | 5.70e-07 | 32 |
central nervous system | 7.30e-07 | 81 |