FFCP PHASE1:Hg19::chr3:13114682..13114690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9922 | |EntrezGene=9922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29112 | |HGNC=29112 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMG9,E9PG60,B4DGC5,Q6DN90 | |UniProt=C9JMG9,E9PG60,B4DGC5,Q6DN90 | ||
|association_with_transcript=-65bp_to_ENST00000429247,ENST00000435445,NM_001134382,uc011auw.1_5end | |association_with_transcript=-65bp_to_ENST00000429247,ENST00000435445,NM_001134382,uc011auw.1_5end | ||
|cluster_id=chr3:13114682..13114690,- | |||
|description=CAGE_peak_19_at_IQSEC1_5end | |description=CAGE_peak_19_at_IQSEC1_5end | ||
|id=chr3:13114682..13114690,- | |id=chr3:13114682..13114690,- | ||
|ontology_enrichment_celltype=CL:0000542!1.36e-11!53;CL:0000051!1.36e-11!53;CL:0000838!1.47e-10!52;CL:0000945!3.84e-10!24;CL:0000826!3.84e-10!24;CL:0002322!1.68e-07!5 | |ontology_enrichment_celltype=CL:0000542!1.36e-11!53;CL:0000051!1.36e-11!53;CL:0000838!1.47e-10!52;CL:0000945!3.84e-10!24;CL:0000826!3.84e-10!24;CL:0002322!1.68e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.17e-25;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;2.47e-19;1!DOID:0050177;2.47e-19;1!DOID:0050427;2.47e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.08e-19,1;DOID:0050177,1.08e-19,1;DOID:0050427,1.08e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.77e-35!57;UBERON:0005068!7.77e-35!57;UBERON:0006241!7.77e-35!57;UBERON:0007135!7.77e-35!57;UBERON:0002616!5.04e-31!59;UBERON:0000955!4.52e-29!69;UBERON:0006238!4.52e-29!69;UBERON:0001017!1.47e-26!82;UBERON:0005743!1.51e-26!86;UBERON:0007023!2.27e-26!115;UBERON:0000073!2.70e-26!94;UBERON:0001016!2.70e-26!94;UBERON:0002020!1.05e-24!34;UBERON:0003528!1.05e-24!34;UBERON:0001893!1.19e-24!34;UBERON:0002780!4.98e-24!41;UBERON:0001890!4.98e-24!41;UBERON:0006240!4.98e-24!41;UBERON:0003080!2.54e-23!42;UBERON:0003075!2.97e-23!86;UBERON:0007284!2.97e-23!86;UBERON:0002791!8.82e-23!33;UBERON:0002346!8.13e-22!90;UBERON:0001869!2.13e-21!32;UBERON:0002619!1.53e-19!22;UBERON:0001950!1.23e-18!20;UBERON:0000956!7.56e-17!25;UBERON:0000203!7.56e-17!25;UBERON:0003056!1.03e-15!61;UBERON:0002298!7.04e-15!8;UBERON:0000033!9.56e-15!123;UBERON:0000153!9.81e-15!129;UBERON:0007811!9.81e-15!129;UBERON:0004733!4.35e-13!12;UBERON:0002028!4.35e-13!12;UBERON:0007277!4.35e-13!12;UBERON:0003076!9.52e-13!15;UBERON:0003057!9.52e-13!15;UBERON:0004732!5.88e-12!13;UBERON:0000200!2.33e-11!6;UBERON:0004121!1.81e-10!169;UBERON:0000924!5.08e-10!173;UBERON:0006601!5.08e-10!173;UBERON:0002308!1.74e-09!9;UBERON:0000125!1.74e-09!9;UBERON:0002771!5.96e-09!3;UBERON:0000988!9.74e-09!3;UBERON:0001871!2.34e-08!7;UBERON:0001896!2.96e-08!3;UBERON:0005290!2.96e-08!3;UBERON:0010096!2.96e-08!3;UBERON:0006331!4.61e-08!3;UBERON:0002680!1.70e-07!9;UBERON:0001895!1.70e-07!9;UBERON:0010092!1.70e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!7.77e-35!57;UBERON:0005068!7.77e-35!57;UBERON:0006241!7.77e-35!57;UBERON:0007135!7.77e-35!57;UBERON:0002616!5.04e-31!59;UBERON:0000955!4.52e-29!69;UBERON:0006238!4.52e-29!69;UBERON:0001017!1.47e-26!82;UBERON:0005743!1.51e-26!86;UBERON:0007023!2.27e-26!115;UBERON:0000073!2.70e-26!94;UBERON:0001016!2.70e-26!94;UBERON:0002020!1.05e-24!34;UBERON:0003528!1.05e-24!34;UBERON:0001893!1.19e-24!34;UBERON:0002780!4.98e-24!41;UBERON:0001890!4.98e-24!41;UBERON:0006240!4.98e-24!41;UBERON:0003080!2.54e-23!42;UBERON:0003075!2.97e-23!86;UBERON:0007284!2.97e-23!86;UBERON:0002791!8.82e-23!33;UBERON:0002346!8.13e-22!90;UBERON:0001869!2.13e-21!32;UBERON:0002619!1.53e-19!22;UBERON:0001950!1.23e-18!20;UBERON:0000956!7.56e-17!25;UBERON:0000203!7.56e-17!25;UBERON:0003056!1.03e-15!61;UBERON:0002298!7.04e-15!8;UBERON:0000033!9.56e-15!123;UBERON:0000153!9.81e-15!129;UBERON:0007811!9.81e-15!129;UBERON:0004733!4.35e-13!12;UBERON:0002028!4.35e-13!12;UBERON:0007277!4.35e-13!12;UBERON:0003076!9.52e-13!15;UBERON:0003057!9.52e-13!15;UBERON:0004732!5.88e-12!13;UBERON:0000200!2.33e-11!6;UBERON:0004121!1.81e-10!169;UBERON:0000924!5.08e-10!173;UBERON:0006601!5.08e-10!173;UBERON:0002308!1.74e-09!9;UBERON:0000125!1.74e-09!9;UBERON:0002771!5.96e-09!3;UBERON:0000988!9.74e-09!3;UBERON:0001871!2.34e-08!7;UBERON:0001896!2.96e-08!3;UBERON:0005290!2.96e-08!3;UBERON:0010096!2.96e-08!3;UBERON:0006331!4.61e-08!3;UBERON:0002680!1.70e-07!9;UBERON:0001895!1.70e-07!9;UBERON:0010092!1.70e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002902;2.47e-19;1!UBERON:0002022;2.47e-19;1!UBERON:0009899;2.47e-19;1!UBERON:0002680;8.66e-19;9!UBERON:0001895;8.66e-19;9!UBERON:0004733;2.88e-14;12!UBERON:0002028;2.88e-14;12!UBERON:0001950;4.45e-14;20!UBERON:0004732;3.20e-13;13!UBERON:0002037;3.88e-13;6!UBERON:0002619;6.91e-13;22!UBERON:0000956;1.93e-11;25!UBERON:0000203;1.93e-11;25!UBERON:0000073;4.14e-11;53!UBERON:0002616;4.14e-11;53!UBERON:0002702;2.37e-10;2!UBERON:0000955;2.71e-09;68!UBERON:0001893;4.23e-08;34!UBERON:0002791;8.03e-08;32!UBERON:0001869;8.03e-08;32!UBERON:0000988;2.55e-07;3!UBERON:0001870;2.55e-07;3!UBERON:0003528;4.96e-07;34!UBERON:0002020;4.96e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,2.71e-19,1;UBERON:0002902,5.62e-19,1;UBERON:0009899,5.62e-19,1;UBERON:0002680,6.40e-19,9;UBERON:0001895,6.40e-19,9;UBERON:0010092,6.40e-19,9;UBERON:0000073,4.11e-16,53;UBERON:0002616,4.11e-16,53;UBERON:0000955,4.67e-16,68;UBERON:0006238,4.67e-16,68;UBERON:0001049,2.99e-15,56;UBERON:0005068,2.99e-15,56;UBERON:0006241,2.99e-15,56;UBERON:0007135,2.99e-15,56;UBERON:0004733,2.30e-14,12;UBERON:0002028,2.30e-14,12;UBERON:0007277,2.30e-14,12;UBERON:0001950,4.76e-14,20;UBERON:0001017,1.79e-13,81;UBERON:0004732,2.60e-13,13;UBERON:0002037,3.14e-13,6;UBERON:0006215,3.14e-13,6;UBERON:0002619,7.36e-13,22;UBERON:0001016,4.13e-12,89;UBERON:0003076,1.27e-11,15;UBERON:0003057,1.27e-11,15;UBERON:0000956,2.04e-11,25;UBERON:0000203,2.04e-11,25;UBERON:0002702,1.89e-10,2;UBERON:0003075,2.25e-10,82;UBERON:0007284,2.25e-10,82;UBERON:0002346,7.01e-10,86;UBERON:0002791,4.62e-09,32;UBERON:0001869,4.62e-09,32;UBERON:0003528,1.46e-08,34;UBERON:0002020,1.46e-08,34;UBERON:0001893,1.46e-08,34;UBERON:0010371,4.04e-08,104;UBERON:0007023,2.01e-07,114;UBERON:0001870,2.19e-07,3;UBERON:0000988,2.32e-07,3;UBERON:0002780,3.53e-07,41;UBERON:0001890,3.53e-07,41;UBERON:0003080,3.53e-07,41;UBERON:0006240,3.53e-07,41 | |||
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| ||
|short_description=p19@IQSEC1 | |short_description=p19@IQSEC1 | ||
}} | }} |
Latest revision as of 19:46, 24 September 2015
Short description: | p19@IQSEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_IQSEC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_ENST00000429247, ENST00000435445, NM_001134382, uc011auw.1_5end |
EntrezGene: | IQSEC1 |
HGNC: | 29112 |
UniProt: | C9JMG9E9PG60B4DGC5Q6DN90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.08e-19 | 1 |
monogenic disease | 1.08e-19 | 1 |
xeroderma pigmentosum | 1.08e-19 | 1 |