FFCP PHASE1:Hg19::chr3:42977827..42977839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506243 | |EntrezGene=100506243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38708 | |HGNC=38708 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBD0 | |UniProt=C9JBD0 | ||
|association_with_transcript=0bp_to_ENST00000418093,NM_001205272_5end | |association_with_transcript=0bp_to_ENST00000418093,NM_001205272_5end | ||
|cluster_id=chr3:42977827..42977839,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_KRBOX1_5end | |description=CAGE_peak_5_at_KRBOX1_5end | ||
|id=chr3:42977827..42977839,+ | |id=chr3:42977827..42977839,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.34e-08!75;CL:0000055!7.17e-08!180 | |ontology_enrichment_celltype=CL:0000057!4.34e-08!75;CL:0000055!7.17e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.68e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,6.58e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.29e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.32e-10!365;UBERON:0002616!3.20e-08!59;UBERON:0001049!3.38e-08!57;UBERON:0005068!3.38e-08!57;UBERON:0006241!3.38e-08!57;UBERON:0007135!3.38e-08!57;UBERON:0000119!1.12e-07!312;UBERON:0003075!1.81e-07!86;UBERON:0007284!1.81e-07!86;UBERON:0000483!2.40e-07!309;UBERON:0000481!2.83e-07!347;UBERON:0000073!3.40e-07!94;UBERON:0001016!3.40e-07!94;UBERON:0000467!5.42e-07!625;UBERON:0005743!5.57e-07!86;UBERON:0000480!6.58e-07!626;UBERON:0001017!8.51e-07!82;UBERON:0000914!9.72e-07!83;UBERON:0002329!9.72e-07!83;UBERON:0003077!9.72e-07!83;UBERON:0003059!9.72e-07!83;UBERON:0007282!9.72e-07!83;UBERON:0009618!9.72e-07!83;UBERON:0007285!9.72e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.29e-10;1!UBERON:0001785;5.29e-10;1!UBERON:0002464;5.29e-10;1!UBERON:0004904;5.29e-10;1!UBERON:0001021;5.29e-10;1!UBERON:0001987;1.33e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.06e-10,1;UBERON:0001785,4.06e-10,1;UBERON:0002464,4.06e-10,1;UBERON:0004904,4.06e-10,1;UBERON:0001021,4.06e-10,1;UBERON:0003902,4.06e-10,1;UBERON:0005425,4.06e-10,1;UBERON:0001987,6.63e-10,4;UBERON:0004340,6.63e-10,4 | |||
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| ||
|short_description=p5@KRBOX1 | |short_description=p5@KRBOX1 | ||
}} | }} |
Latest revision as of 07:16, 18 September 2015
Short description: | p5@KRBOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KRBOX1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000418093, NM_001205272_5end |
EntrezGene: | KRBOX1 |
HGNC: | 38708 |
UniProt: | C9JBD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 6.58e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.06e-10 | 1 |
cranial nerve | 4.06e-10 | 1 |
nerve trunk | 4.06e-10 | 1 |
nerve connecting eye with brain | 4.06e-10 | 1 |
nerve | 4.06e-10 | 1 |
retinal neural layer | 4.06e-10 | 1 |
presumptive neural retina | 4.06e-10 | 1 |
placenta | 6.63e-10 | 4 |
allantois | 6.63e-10 | 4 |