FFCP PHASE1:Hg19::chr15:73976691..73976704,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:73976691..73976704,+
|short_description=p3@CD276
|description=CAGE_peak_3_at_CD276_5end
|association_with_transcript=-19bp_to_ENST00000379823,ENST00000543...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80381 | |EntrezGene=80381 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19137 | |HGNC=19137 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYM9 | |UniProt=F5GYM9 | ||
|association_with_transcript=-19bp_to_ENST00000379823,ENST00000543481,ENST00000558689_5end | |||
|cluster_id=chr15:73976691..73976704,+ | |||
|coexpression_cluster_id=C3511 | |||
|description=CAGE_peak_3_at_CD276_5end | |||
|id=chr15:73976691..73976704,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.09e-26!180;CL:0002321!1.86e-23!248;CL:0000220!8.33e-23!246;CL:0000222!4.07e-17!119;CL:0000548!1.63e-16!679;CL:0000004!1.63e-16!679;CL:0000255!1.63e-16!679;CL:0000012!1.66e-15!682;CL:0000144!4.63e-15!625;CL:0002371!8.88e-14!591;CL:0000183!2.93e-11!59;CL:0000393!1.54e-10!60;CL:0000211!1.54e-10!60;CL:0000066!3.56e-10!254;CL:0000680!5.28e-10!57;CL:0000056!5.28e-10!57;CL:0000355!5.28e-10!57;CL:0000187!2.60e-09!54;CL:0000192!2.98e-09!42;CL:0000514!2.98e-09!42;CL:0000057!5.57e-09!75;CL:0002078!3.68e-08!44;CL:0000221!6.00e-08!71;CL:1000497!1.06e-07!18;CL:0002518!1.06e-07!18;CL:0000213!1.66e-07!57;CL:0000215!1.66e-07!57;CL:1000449!2.95e-07!16;CL:0000133!3.22e-07!59;CL:0000359!5.50e-07!32;CL:0000115!7.90e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.39e-08;17!CL:0002518;1.39e-08;17!CL:1000449;2.31e-08;15!CL:0002681;2.82e-07;12!CL:0002584;2.82e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.29e-21,250;CL:0000222,7.92e-16,121;CL:0000393,7.41e-10,61;CL:0000211,7.41e-10,61;CL:0000680,1.81e-09,58;CL:0000056,1.81e-09,58;CL:0000355,1.81e-09,58;CL:0000057,4.21e-09,76;CL:1000497,6.16e-09,17;CL:0002518,6.16e-09,17;CL:0000187,9.36e-09,55;CL:0000192,1.29e-08,43;CL:0000514,1.29e-08,43;CL:1000449,1.68e-08,15;CL:0000066,5.84e-08,253;CL:0002078,1.90e-07,45;CL:0002681,3.10e-07,12;CL:0002584,3.10e-07,12;CL:0000221,6.29e-07,72;CL:0000213,7.04e-07,58;CL:0000215,7.04e-07,58;CL:0000359,8.05e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.95e-14!79;UBERON:0007798!3.95e-14!79;UBERON:0003914!2.91e-13!118;UBERON:0005256!6.15e-13!143;UBERON:0000468!1.10e-11!659;UBERON:0004872!1.52e-11!84;UBERON:0002100!1.82e-11!216;UBERON:0000490!8.91e-11!138;UBERON:0001981!1.35e-10!60;UBERON:0007500!1.35e-10!60;UBERON:0004537!1.35e-10!60;UBERON:0006965!1.35e-10!60;UBERON:0000055!1.53e-10!69;UBERON:0000119!1.66e-10!312;UBERON:0000486!2.26e-10!82;UBERON:0000483!4.55e-10!309;UBERON:0000914!5.74e-10!83;UBERON:0002329!5.74e-10!83;UBERON:0003077!5.74e-10!83;UBERON:0003059!5.74e-10!83;UBERON:0007282!5.74e-10!83;UBERON:0009618!5.74e-10!83;UBERON:0007285!5.74e-10!83;UBERON:0001637!9.01e-10!42;UBERON:0003509!9.01e-10!42;UBERON:0004572!9.01e-10!42;UBERON:0001134!1.80e-09!61;UBERON:0002036!1.80e-09!61;UBERON:0003082!1.80e-09!61;UBERON:0004290!2.58e-09!70;UBERON:0002385!3.45e-09!63;UBERON:0001015!3.45e-09!63;UBERON:0000383!3.45e-09!63;UBERON:0000922!5.22e-09!612;UBERON:0000467!3.11e-08!625;UBERON:0004535!3.41e-08!110;UBERON:0006554!4.56e-08!44;UBERON:0000480!5.25e-08!626;UBERON:0001009!5.26e-08!113;UBERON:0001008!6.60e-08!45;UBERON:0002050!9.34e-08!605;UBERON:0005423!9.34e-08!605;UBERON:0000923!1.70e-07!604;UBERON:0005291!1.70e-07!604;UBERON:0006598!1.70e-07!604;UBERON:0002532!1.70e-07!604;UBERON:0004211!2.95e-07!16;UBERON:0001285!2.95e-07!16;UBERON:0007684!2.95e-07!16;UBERON:0003220!2.95e-07!16;UBERON:0004208!2.95e-07!16;UBERON:0003104!3.19e-07!238;UBERON:0009142!3.19e-07!238;UBERON:0004573!3.81e-07!33;UBERON:0004571!3.81e-07!33;UBERON:0000481!4.58e-07!347;UBERON:0000926!8.27e-07!448;UBERON:0004120!8.27e-07!448;UBERON:0006603!8.27e-07!448;UBERON:0006555!8.82e-07!17;UBERON:0005103!8.82e-07!17;UBERON:0000083!8.82e-07!17;UBERON:0009201!8.82e-07!17;UBERON:0004819!8.82e-07!17;UBERON:0006553!8.82e-07!17;UBERON:0003074!8.82e-07!17;UBERON:0003060!8.82e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.31e-08;15!UBERON:0004819;2.31e-08;15!UBERON:0001285;2.31e-08;15!UBERON:0007684;2.31e-08;15!UBERON:0006554;2.53e-08;30!UBERON:0001008;2.53e-08;30!UBERON:0003914;8.95e-08;74!UBERON:0001225;2.82e-07;12!UBERON:0008987;2.82e-07;12!UBERON:0002113;3.01e-07;24!UBERON:0011143;3.01e-07;24!UBERON:0001637;3.03e-07;42!UBERON:0003509;3.03e-07;42!UBERON:0004572;3.03e-07;42!UBERON:0001851;6.76e-07;15 | |||
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| ||
|short_description=p3@CD276 | |||
}} | }} |
Latest revision as of 23:43, 18 September 2015
Short description: | p3@CD276 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD276_5end |
Coexpression cluster: | C3511_Mesenchymal_Dendritic_Macrophage_Hepatic_Renal_Osteoblast_Melanocyte |
Association with transcript: | -19bp_to_ENST00000379823, ENST00000543481, ENST00000558689_5end |
EntrezGene: | CD276 |
HGNC: | 19137 |
UniProt: | F5GYM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.29e-21 | 250 |
mesodermal cell | 7.92e-16 | 121 |
electrically responsive cell | 7.41e-10 | 61 |
electrically active cell | 7.41e-10 | 61 |
muscle precursor cell | 1.81e-09 | 58 |
myoblast | 1.81e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.81e-09 | 58 |
fibroblast | 4.21e-09 | 76 |
kidney cell | 6.16e-09 | 17 |
kidney epithelial cell | 6.16e-09 | 17 |
muscle cell | 9.36e-09 | 55 |
smooth muscle cell | 1.29e-08 | 43 |
smooth muscle myoblast | 1.29e-08 | 43 |
epithelial cell of nephron | 1.68e-08 | 15 |
epithelial cell | 5.84e-08 | 253 |
meso-epithelial cell | 1.90e-07 | 45 |
kidney cortical cell | 3.10e-07 | 12 |
renal cortical epithelial cell | 3.10e-07 | 12 |
ectodermal cell | 6.29e-07 | 72 |
lining cell | 7.04e-07 | 58 |
barrier cell | 7.04e-07 | 58 |
vascular associated smooth muscle cell | 8.05e-07 | 32 |