FFCP PHASE1:Hg19::chr7:2671663..2671674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80727 | |EntrezGene=80727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22222 | |HGNC=22222 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYU9,Q9C0H2 | |UniProt=Q8WYU9,Q9C0H2 | ||
|association_with_transcript=60bp_to_NM_025250,uc003smp.2_5end | |association_with_transcript=60bp_to_NM_025250,uc003smp.2_5end | ||
|cluster_id=chr7:2671663..2671674,+ | |||
|description=CAGE_peak_5_at_TTYH3_5end | |description=CAGE_peak_5_at_TTYH3_5end | ||
|id=chr7:2671663..2671674,+ | |id=chr7:2671663..2671674,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.06e-13!246;CL:0002321!1.13e-13!248;CL:0000144!3.67e-12!625;CL:0000055!3.54e-11!180;CL:0000133!1.29e-10!59;CL:0002371!1.37e-10!591;CL:0000221!8.37e-10!71;CL:0000222!1.30e-09!119;CL:0000115!2.21e-09!35;CL:0000333!2.91e-09!41;CL:0002194!6.38e-09!63;CL:0000576!6.38e-09!63;CL:0000040!6.38e-09!63;CL:0000559!6.38e-09!63;CL:0002057!1.48e-08!42;CL:0002078!2.17e-08!44;CL:0000548!2.36e-08!679;CL:0000004!2.36e-08!679;CL:0000255!2.36e-08!679;CL:0002009!2.38e-08!65;CL:0000213!7.41e-08!57;CL:0000215!7.41e-08!57;CL:0000557!1.02e-07!71;CL:0000012!1.33e-07!682;CL:0000839!5.26e-07!70;CL:0000860!7.54e-07!45;CL:0000075!8.71e-07!27 | |ontology_enrichment_celltype=CL:0000220!1.06e-13!246;CL:0002321!1.13e-13!248;CL:0000144!3.67e-12!625;CL:0000055!3.54e-11!180;CL:0000133!1.29e-10!59;CL:0002371!1.37e-10!591;CL:0000221!8.37e-10!71;CL:0000222!1.30e-09!119;CL:0000115!2.21e-09!35;CL:0000333!2.91e-09!41;CL:0002194!6.38e-09!63;CL:0000576!6.38e-09!63;CL:0000040!6.38e-09!63;CL:0000559!6.38e-09!63;CL:0002057!1.48e-08!42;CL:0002078!2.17e-08!44;CL:0000548!2.36e-08!679;CL:0000004!2.36e-08!679;CL:0000255!2.36e-08!679;CL:0002009!2.38e-08!65;CL:0000213!7.41e-08!57;CL:0000215!7.41e-08!57;CL:0000557!1.02e-07!71;CL:0000012!1.33e-07!682;CL:0000839!5.26e-07!70;CL:0000860!7.54e-07!45;CL:0000075!8.71e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000115;3.68e-08;36!CL:0000473;2.90e-07;39!CL:0000234;2.90e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.13e-12,250;CL:0000473,7.72e-12,48;CL:0000234,7.72e-12,48;CL:0000133,7.77e-12,59;CL:0000333,2.72e-10,41;CL:0000221,1.06e-09,72;CL:0002194,1.28e-09,59;CL:0000576,1.28e-09,59;CL:0000040,1.28e-09,59;CL:0000559,1.28e-09,59;CL:0000115,2.74e-09,36;CL:0002009,9.43e-09,61;CL:0000222,1.00e-08,121;CL:0000860,1.04e-08,42;CL:0002057,1.04e-08,42;CL:0002078,6.19e-08,45;CL:0000557,8.68e-08,67;CL:0000839,1.59e-07,66;CL:0000075,5.02e-07,27;CL:0000766,5.38e-07,72;CL:0000213,5.56e-07,58;CL:0000215,5.56e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000133;3.61e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!7.10e-17!612;UBERON:0000468!2.59e-16!659;UBERON:0002050!7.30e-16!605;UBERON:0005423!7.30e-16!605;UBERON:0000467!8.28e-16!625;UBERON:0000923!1.71e-15!604;UBERON:0005291!1.71e-15!604;UBERON:0006598!1.71e-15!604;UBERON:0002532!1.71e-15!604;UBERON:0000480!1.80e-15!626;UBERON:0003081!1.22e-11!216;UBERON:0002049!9.96e-11!79;UBERON:0007798!9.96e-11!79;UBERON:0000062!1.21e-08!511;UBERON:0002204!1.37e-08!167;UBERON:0004872!3.99e-08!84;UBERON:0001981!6.32e-08!60;UBERON:0007500!6.32e-08!60;UBERON:0004537!6.32e-08!60;UBERON:0006965!6.32e-08!60;UBERON:0000055!6.69e-08!69;UBERON:0003914!7.41e-08!118;UBERON:0000119!1.22e-07!312;UBERON:0001637!1.53e-07!42;UBERON:0003509!1.53e-07!42;UBERON:0004572!1.53e-07!42;UBERON:0001474!1.62e-07!86;UBERON:0004535!1.69e-07!110;UBERON:0004765!3.05e-07!101;UBERON:0001434!3.05e-07!101;UBERON:0000483!4.26e-07!309;UBERON:0002371!4.46e-07!80;UBERON:0001009!7.60e-07!113;UBERON:0000025!9.32e-07!194 | |ontology_enrichment_uberon=UBERON:0000922!7.10e-17!612;UBERON:0000468!2.59e-16!659;UBERON:0002050!7.30e-16!605;UBERON:0005423!7.30e-16!605;UBERON:0000467!8.28e-16!625;UBERON:0000923!1.71e-15!604;UBERON:0005291!1.71e-15!604;UBERON:0006598!1.71e-15!604;UBERON:0002532!1.71e-15!604;UBERON:0000480!1.80e-15!626;UBERON:0003081!1.22e-11!216;UBERON:0002049!9.96e-11!79;UBERON:0007798!9.96e-11!79;UBERON:0000062!1.21e-08!511;UBERON:0002204!1.37e-08!167;UBERON:0004872!3.99e-08!84;UBERON:0001981!6.32e-08!60;UBERON:0007500!6.32e-08!60;UBERON:0004537!6.32e-08!60;UBERON:0006965!6.32e-08!60;UBERON:0000055!6.69e-08!69;UBERON:0003914!7.41e-08!118;UBERON:0000119!1.22e-07!312;UBERON:0001637!1.53e-07!42;UBERON:0003509!1.53e-07!42;UBERON:0004572!1.53e-07!42;UBERON:0001474!1.62e-07!86;UBERON:0004535!1.69e-07!110;UBERON:0004765!3.05e-07!101;UBERON:0001434!3.05e-07!101;UBERON:0000483!4.26e-07!309;UBERON:0002371!4.46e-07!80;UBERON:0001009!7.60e-07!113;UBERON:0000025!9.32e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;5.17e-07;74!UBERON:0001637;8.74e-07;42!UBERON:0003509;8.74e-07;42!UBERON:0004572;8.74e-07;42 | |||
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| ||
|short_description=p5@TTYH3 | |short_description=p5@TTYH3 | ||
}} | }} |
Latest revision as of 00:15, 18 September 2015
Short description: | p5@TTYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TTYH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_NM_025250, uc003smp.2_5end |
EntrezGene: | TTYH3 |
HGNC: | 22222 |
UniProt: | Q8WYU9Q9C0H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.13e-12 | 250 |
defensive cell | 7.72e-12 | 48 |
phagocyte | 7.72e-12 | 48 |
neurectodermal cell | 7.77e-12 | 59 |
migratory neural crest cell | 2.72e-10 | 41 |
ectodermal cell | 1.06e-09 | 72 |
monopoietic cell | 1.28e-09 | 59 |
monocyte | 1.28e-09 | 59 |
monoblast | 1.28e-09 | 59 |
promonocyte | 1.28e-09 | 59 |
endothelial cell | 2.74e-09 | 36 |
macrophage dendritic cell progenitor | 9.43e-09 | 61 |
mesodermal cell | 1.00e-08 | 121 |
classical monocyte | 1.04e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-08 | 42 |
meso-epithelial cell | 6.19e-08 | 45 |
granulocyte monocyte progenitor cell | 8.68e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.59e-07 | 66 |
columnar/cuboidal epithelial cell | 5.02e-07 | 27 |
myeloid leukocyte | 5.38e-07 | 72 |
lining cell | 5.56e-07 | 58 |
barrier cell | 5.56e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
embryo | 1.92e-12 | 592 |
developing anatomical structure | 2.35e-12 | 581 |
lateral plate mesoderm | 1.71e-11 | 203 |
vasculature | 5.49e-11 | 78 |
vascular system | 5.49e-11 | 78 |
embryonic structure | 7.25e-11 | 564 |
germ layer | 1.33e-10 | 560 |
germ layer / neural crest | 1.33e-10 | 560 |
embryonic tissue | 1.33e-10 | 560 |
presumptive structure | 1.33e-10 | 560 |
germ layer / neural crest derived structure | 1.33e-10 | 560 |
epiblast (generic) | 1.33e-10 | 560 |
mesoderm | 5.49e-10 | 315 |
mesoderm-derived structure | 5.49e-10 | 315 |
presumptive mesoderm | 5.49e-10 | 315 |
artery | 1.25e-08 | 42 |
arterial blood vessel | 1.25e-08 | 42 |
arterial system | 1.25e-08 | 42 |
epithelial tube open at both ends | 1.26e-08 | 59 |
blood vessel | 1.26e-08 | 59 |
blood vasculature | 1.26e-08 | 59 |
vascular cord | 1.26e-08 | 59 |
splanchnic layer of lateral plate mesoderm | 1.84e-08 | 83 |
cardiovascular system | 2.20e-08 | 109 |
skeletal element | 3.41e-08 | 90 |
musculoskeletal system | 3.62e-08 | 167 |
epithelial tube | 3.67e-08 | 117 |
vessel | 4.49e-08 | 68 |
bone element | 9.07e-08 | 82 |
circulatory system | 1.47e-07 | 112 |
skeletal system | 3.58e-07 | 100 |
tube | 4.02e-07 | 192 |
bone marrow | 4.05e-07 | 76 |