FFCP PHASE1:Hg19::chr7:35293685..35293718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57057 | |EntrezGene=57057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11598 | |HGNC=11598 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMR3 | |UniProt=Q9UMR3 | ||
|association_with_transcript=0bp_to_NM_001077653,NM_001166220_5end | |association_with_transcript=0bp_to_NM_001077653,NM_001166220_5end | ||
|cluster_id=chr7:35293685..35293718,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_1_at_TBX20_5end | |description=CAGE_peak_1_at_TBX20_5end | ||
|id=chr7:35293685..35293718,- | |id=chr7:35293685..35293718,- | ||
|ontology_enrichment_celltype=CL:0002494!1.03e-12!16;CL:0000359!1.68e-12!32;CL:0000187!2.28e-09!54;CL:0000183!7.31e-09!59;CL:0000393!9.92e-09!60;CL:0000211!9.92e-09!60;CL:0000192!1.74e-08!42;CL:0000514!1.74e-08!42;CL:0000680!3.49e-08!57;CL:0000056!3.49e-08!57;CL:0000355!3.49e-08!57;CL:0000222!7.51e-08!119 | |ontology_enrichment_celltype=CL:0002494!1.03e-12!16;CL:0000359!1.68e-12!32;CL:0000187!2.28e-09!54;CL:0000183!7.31e-09!59;CL:0000393!9.92e-09!60;CL:0000211!9.92e-09!60;CL:0000192!1.74e-08!42;CL:0000514!1.74e-08!42;CL:0000680!3.49e-08!57;CL:0000056!3.49e-08!57;CL:0000355!3.49e-08!57;CL:0000222!7.51e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0002494;2.83e-16;16!CL:0000359;2.52e-14;32!CL:0000192;8.57e-09;43!CL:0002539;5.88e-08;10!CL:0002548;1.21e-07;6!CL:0002569;8.00e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.90e-16,16;CL:0000359,1.37e-15,32;CL:0000192,2.85e-11,43;CL:0000514,2.85e-11,43;CL:0000187,2.24e-10,55;CL:0000222,8.65e-10,121;CL:0000680,2.53e-09,58;CL:0000056,2.53e-09,58;CL:0000355,2.53e-09,58;CL:0000393,5.28e-09,61;CL:0000211,5.28e-09,61;CL:0002539,5.08e-08,10;CL:0002548,1.17e-07,6;CL:0002321,3.44e-07,250;CL:0002569,7.78e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;8.57e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;8.41e-07;22!DOID:2994;8.41e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.57e-07,22;DOID:2994,8.57e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.38e-24!84;UBERON:0007100!2.41e-21!27;UBERON:0001009!1.31e-20!113;UBERON:0003914!1.13e-19!118;UBERON:0000948!8.57e-19!24;UBERON:0005498!8.57e-19!24;UBERON:0004140!8.57e-19!24;UBERON:0009881!8.57e-19!24;UBERON:0004141!8.57e-19!24;UBERON:0003084!8.57e-19!24;UBERON:0007005!8.57e-19!24;UBERON:0004139!8.57e-19!24;UBERON:0004291!8.57e-19!24;UBERON:0004535!1.03e-18!110;UBERON:0001637!1.60e-16!42;UBERON:0003509!1.60e-16!42;UBERON:0004572!1.60e-16!42;UBERON:0001981!1.29e-15!60;UBERON:0007500!1.29e-15!60;UBERON:0004537!1.29e-15!60;UBERON:0006965!1.29e-15!60;UBERON:0002049!5.03e-13!79;UBERON:0007798!5.03e-13!79;UBERON:0000055!1.74e-12!69;UBERON:0004573!2.46e-12!33;UBERON:0004571!2.46e-12!33;UBERON:0003081!4.22e-12!216;UBERON:0000947!7.70e-10!21;UBERON:0010191!7.70e-10!21;UBERON:0003103!1.01e-09!69;UBERON:0004290!5.51e-09!70;UBERON:0000926!2.12e-08!448;UBERON:0004120!2.12e-08!448;UBERON:0006603!2.12e-08!448;UBERON:0002385!7.39e-08!63;UBERON:0001015!7.39e-08!63;UBERON:0000383!7.39e-08!63;UBERON:0002331!1.12e-07!10;UBERON:0000358!1.12e-07!10;UBERON:0000307!1.12e-07!10;UBERON:0000091!1.12e-07!10;UBERON:0000087!1.12e-07!10;UBERON:0007806!1.12e-07!10;UBERON:0008780!1.12e-07!10;UBERON:0005728!1.12e-07!10;UBERON:0000025!1.83e-07!194;UBERON:0001134!2.46e-07!61;UBERON:0002036!2.46e-07!61;UBERON:0003082!2.46e-07!61;UBERON:0000914!9.76e-07!83;UBERON:0002329!9.76e-07!83;UBERON:0003077!9.76e-07!83;UBERON:0003059!9.76e-07!83;UBERON:0007282!9.76e-07!83;UBERON:0009618!9.76e-07!83;UBERON:0007285!9.76e-07!83 | |ontology_enrichment_uberon=UBERON:0004872!1.38e-24!84;UBERON:0007100!2.41e-21!27;UBERON:0001009!1.31e-20!113;UBERON:0003914!1.13e-19!118;UBERON:0000948!8.57e-19!24;UBERON:0005498!8.57e-19!24;UBERON:0004140!8.57e-19!24;UBERON:0009881!8.57e-19!24;UBERON:0004141!8.57e-19!24;UBERON:0003084!8.57e-19!24;UBERON:0007005!8.57e-19!24;UBERON:0004139!8.57e-19!24;UBERON:0004291!8.57e-19!24;UBERON:0004535!1.03e-18!110;UBERON:0001637!1.60e-16!42;UBERON:0003509!1.60e-16!42;UBERON:0004572!1.60e-16!42;UBERON:0001981!1.29e-15!60;UBERON:0007500!1.29e-15!60;UBERON:0004537!1.29e-15!60;UBERON:0006965!1.29e-15!60;UBERON:0002049!5.03e-13!79;UBERON:0007798!5.03e-13!79;UBERON:0000055!1.74e-12!69;UBERON:0004573!2.46e-12!33;UBERON:0004571!2.46e-12!33;UBERON:0003081!4.22e-12!216;UBERON:0000947!7.70e-10!21;UBERON:0010191!7.70e-10!21;UBERON:0003103!1.01e-09!69;UBERON:0004290!5.51e-09!70;UBERON:0000926!2.12e-08!448;UBERON:0004120!2.12e-08!448;UBERON:0006603!2.12e-08!448;UBERON:0002385!7.39e-08!63;UBERON:0001015!7.39e-08!63;UBERON:0000383!7.39e-08!63;UBERON:0002331!1.12e-07!10;UBERON:0000358!1.12e-07!10;UBERON:0000307!1.12e-07!10;UBERON:0000091!1.12e-07!10;UBERON:0000087!1.12e-07!10;UBERON:0007806!1.12e-07!10;UBERON:0008780!1.12e-07!10;UBERON:0005728!1.12e-07!10;UBERON:0000025!1.83e-07!194;UBERON:0001134!2.46e-07!61;UBERON:0002036!2.46e-07!61;UBERON:0003082!2.46e-07!61;UBERON:0000914!9.76e-07!83;UBERON:0002329!9.76e-07!83;UBERON:0003077!9.76e-07!83;UBERON:0003059!9.76e-07!83;UBERON:0007282!9.76e-07!83;UBERON:0009618!9.76e-07!83;UBERON:0007285!9.76e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.31e-26;25!UBERON:0000948;5.40e-23;22!UBERON:0001637;1.24e-15;42!UBERON:0003509;1.24e-15;42!UBERON:0004572;1.24e-15;42!UBERON:0004573;3.60e-14;33!UBERON:0004571;3.60e-14;33!UBERON:0000947;1.05e-12;21!UBERON:0010191;1.05e-12;21!UBERON:0007500;4.27e-10;56!UBERON:0001981;4.27e-10;56!UBERON:0004537;4.27e-10;56!UBERON:0002331;1.45e-09;10!UBERON:0004237;5.88e-08;10!UBERON:0004695;5.88e-08;10!UBERON:0002111;5.88e-08;10!UBERON:0004178;5.88e-08;10!UBERON:0001009;5.98e-08;112!UBERON:0004535;7.14e-07;109!UBERON:0003422;8.00e-07;6 | |||
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| ||
|short_description=p1@TBX20 | |short_description=p1@TBX20 | ||
}} | }} |
Latest revision as of 09:08, 18 September 2015
Short description: | p1@TBX20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBX20_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 0bp_to_NM_001077653, NM_001166220_5end |
EntrezGene: | TBX20 |
HGNC: | 11598 |
UniProt: | Q9UMR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.90e-16 | 16 |
vascular associated smooth muscle cell | 1.37e-15 | 32 |
smooth muscle cell | 2.85e-11 | 43 |
smooth muscle myoblast | 2.85e-11 | 43 |
muscle cell | 2.24e-10 | 55 |
mesodermal cell | 8.65e-10 | 121 |
muscle precursor cell | 2.53e-09 | 58 |
myoblast | 2.53e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.53e-09 | 58 |
electrically responsive cell | 5.28e-09 | 61 |
electrically active cell | 5.28e-09 | 61 |
aortic smooth muscle cell | 5.08e-08 | 10 |
cardiac fibroblast | 1.17e-07 | 6 |
embryonic cell | 3.44e-07 | 250 |
mesenchymal stem cell of umbilical cord | 7.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.57e-07 | 22 |
germ cell cancer | 8.57e-07 | 22 |