FFCP PHASE1:Hg19::chr7:93551032..93551066,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2791 | |EntrezGene=2791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |HGNC=4403 | ||
|TSSclassifier=strong | |||
|UniProt=P61952,Q53Y01 | |UniProt=P61952,Q53Y01 | ||
|association_with_transcript=16bp_to_NM_004126,uc003und.2_5end | |association_with_transcript=16bp_to_NM_004126,uc003und.2_5end | ||
|cluster_id=chr7:93551032..93551066,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_3_at_GNG11_5end | |description=CAGE_peak_3_at_GNG11_5end | ||
|id=chr7:93551032..93551066,+ | |id=chr7:93551032..93551066,+ | ||
|ontology_enrichment_celltype=CL:0000222!2.35e-27!119;CL:0000055!5.30e-25!180;CL:0000183!1.29e-21!59;CL:0000680!1.92e-20!57;CL:0000056!1.92e-20!57;CL:0000355!1.92e-20!57;CL:0000187!8.86e-20!54;CL:0000192!1.72e-18!42;CL:0000514!1.72e-18!42;CL:0002139!4.47e-17!24;CL:0000115!4.88e-17!35;CL:0000393!1.91e-16!60;CL:0000211!1.91e-16!60;CL:0000359!2.46e-15!32;CL:0002078!4.32e-14!44;CL:0000071!3.08e-13!18;CL:0002546!3.08e-13!18;CL:0000057!1.92e-10!75;CL:0000213!5.62e-09!57;CL:0000215!5.62e-09!57;CL:0000220!9.43e-08!246;CL:0002494!1.49e-07!16;CL:0002321!1.60e-07!248;CL:1000413!2.49e-07!9 | |ontology_enrichment_celltype=CL:0000222!2.35e-27!119;CL:0000055!5.30e-25!180;CL:0000183!1.29e-21!59;CL:0000680!1.92e-20!57;CL:0000056!1.92e-20!57;CL:0000355!1.92e-20!57;CL:0000187!8.86e-20!54;CL:0000192!1.72e-18!42;CL:0000514!1.72e-18!42;CL:0002139!4.47e-17!24;CL:0000115!4.88e-17!35;CL:0000393!1.91e-16!60;CL:0000211!1.91e-16!60;CL:0000359!2.46e-15!32;CL:0002078!4.32e-14!44;CL:0000071!3.08e-13!18;CL:0002546!3.08e-13!18;CL:0000057!1.92e-10!75;CL:0000213!5.62e-09!57;CL:0000215!5.62e-09!57;CL:0000220!9.43e-08!246;CL:0002494!1.49e-07!16;CL:0002321!1.60e-07!248;CL:1000413!2.49e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.36e-17;24!CL:0000115;2.75e-15;36!CL:0000359;4.36e-15;32!CL:0000071;1.26e-13;18!CL:0000192;3.15e-13;43!CL:0000187;4.32e-11;55!CL:0002078;8.69e-10;45!CL:0000393;1.25e-08;61!CL:0000211;1.25e-08;61!CL:0002494;8.53e-08;16!CL:1000413;1.60e-07;9!CL:1000497;7.88e-07;17!CL:0002518;7.88e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.31e-28,121;CL:0000680,1.59e-20,58;CL:0000056,1.59e-20,58;CL:0000355,1.59e-20,58;CL:0000187,7.85e-20,55;CL:0000192,2.04e-18,43;CL:0000514,2.04e-18,43;CL:0000115,3.59e-18,36;CL:0002139,1.41e-17,24;CL:0000393,4.53e-16,61;CL:0000211,4.53e-16,61;CL:0000359,8.84e-16,32;CL:0002078,4.11e-15,45;CL:0000071,1.29e-13,18;CL:0002546,1.29e-13,18;CL:0000057,3.79e-11,76;CL:0000213,2.66e-09,58;CL:0000215,2.66e-09,58;CL:0002494,9.54e-08,16;CL:1000413,1.62e-07,9;CL:1000497,7.25e-07,17;CL:0002518,7.25e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;1.26e-13;18!CL:0000514;3.15e-13;43!CL:0000355;5.80e-11;58!CL:0000222;3.61e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!4.66e-38!113;UBERON:0004535!1.14e-37!110;UBERON:0002049!1.31e-36!79;UBERON:0007798!1.31e-36!79;UBERON:0004872!3.06e-33!84;UBERON:0000055!1.01e-32!69;UBERON:0003914!4.03e-31!118;UBERON:0001981!2.84e-29!60;UBERON:0007500!2.84e-29!60;UBERON:0004537!2.84e-29!60;UBERON:0006965!2.84e-29!60;UBERON:0000477!2.47e-26!286;UBERON:0000490!6.72e-23!138;UBERON:0004290!1.94e-22!70;UBERON:0005256!9.30e-22!143;UBERON:0000914!1.14e-21!83;UBERON:0002329!1.14e-21!83;UBERON:0003077!1.14e-21!83;UBERON:0003059!1.14e-21!83;UBERON:0007282!1.14e-21!83;UBERON:0009618!1.14e-21!83;UBERON:0007285!1.14e-21!83;UBERON:0001134!1.77e-21!61;UBERON:0002036!1.77e-21!61;UBERON:0003082!1.77e-21!61;UBERON:0002385!1.86e-21!63;UBERON:0001015!1.86e-21!63;UBERON:0000383!1.86e-21!63;UBERON:0001637!3.97e-21!42;UBERON:0003509!3.97e-21!42;UBERON:0004572!3.97e-21!42;UBERON:0000119!3.10e-20!312;UBERON:0004111!8.28e-20!241;UBERON:0000483!1.42e-19!309;UBERON:0000481!7.31e-18!347;UBERON:0000468!2.87e-17!659;UBERON:0000025!6.96e-17!194;UBERON:0002100!9.33e-17!216;UBERON:0000486!3.10e-16!82;UBERON:0004573!7.61e-16!33;UBERON:0004571!7.61e-16!33;UBERON:0003104!7.49e-15!238;UBERON:0009142!7.49e-15!238;UBERON:0000467!1.91e-14!625;UBERON:0000475!2.96e-14!365;UBERON:0000480!3.74e-14!626;UBERON:0001986!3.08e-13!18;UBERON:0004638!3.08e-13!18;UBERON:0004852!3.08e-13!18;UBERON:0000487!1.40e-12!22;UBERON:0003103!1.02e-11!69;UBERON:0006914!3.60e-11!25;UBERON:0000922!9.79e-11!612;UBERON:0000926!1.17e-10!448;UBERON:0004120!1.17e-10!448;UBERON:0006603!1.17e-10!448;UBERON:0002050!1.91e-10!605;UBERON:0005423!1.91e-10!605;UBERON:0000923!3.53e-10!604;UBERON:0005291!3.53e-10!604;UBERON:0006598!3.53e-10!604;UBERON:0002532!3.53e-10!604;UBERON:0007100!3.80e-10!27;UBERON:0000948!6.30e-10!24;UBERON:0005498!6.30e-10!24;UBERON:0004140!6.30e-10!24;UBERON:0009881!6.30e-10!24;UBERON:0004141!6.30e-10!24;UBERON:0003084!6.30e-10!24;UBERON:0007005!6.30e-10!24;UBERON:0004139!6.30e-10!24;UBERON:0004291!6.30e-10!24;UBERON:0000947!1.62e-09!21;UBERON:0010191!1.62e-09!21;UBERON:0003915!2.49e-07!9;UBERON:0004700!2.49e-07!9;UBERON:0001917!2.49e-07!9;UBERON:0000479!6.07e-07!787 | |ontology_enrichment_uberon=UBERON:0001009!4.66e-38!113;UBERON:0004535!1.14e-37!110;UBERON:0002049!1.31e-36!79;UBERON:0007798!1.31e-36!79;UBERON:0004872!3.06e-33!84;UBERON:0000055!1.01e-32!69;UBERON:0003914!4.03e-31!118;UBERON:0001981!2.84e-29!60;UBERON:0007500!2.84e-29!60;UBERON:0004537!2.84e-29!60;UBERON:0006965!2.84e-29!60;UBERON:0000477!2.47e-26!286;UBERON:0000490!6.72e-23!138;UBERON:0004290!1.94e-22!70;UBERON:0005256!9.30e-22!143;UBERON:0000914!1.14e-21!83;UBERON:0002329!1.14e-21!83;UBERON:0003077!1.14e-21!83;UBERON:0003059!1.14e-21!83;UBERON:0007282!1.14e-21!83;UBERON:0009618!1.14e-21!83;UBERON:0007285!1.14e-21!83;UBERON:0001134!1.77e-21!61;UBERON:0002036!1.77e-21!61;UBERON:0003082!1.77e-21!61;UBERON:0002385!1.86e-21!63;UBERON:0001015!1.86e-21!63;UBERON:0000383!1.86e-21!63;UBERON:0001637!3.97e-21!42;UBERON:0003509!3.97e-21!42;UBERON:0004572!3.97e-21!42;UBERON:0000119!3.10e-20!312;UBERON:0004111!8.28e-20!241;UBERON:0000483!1.42e-19!309;UBERON:0000481!7.31e-18!347;UBERON:0000468!2.87e-17!659;UBERON:0000025!6.96e-17!194;UBERON:0002100!9.33e-17!216;UBERON:0000486!3.10e-16!82;UBERON:0004573!7.61e-16!33;UBERON:0004571!7.61e-16!33;UBERON:0003104!7.49e-15!238;UBERON:0009142!7.49e-15!238;UBERON:0000467!1.91e-14!625;UBERON:0000475!2.96e-14!365;UBERON:0000480!3.74e-14!626;UBERON:0001986!3.08e-13!18;UBERON:0004638!3.08e-13!18;UBERON:0004852!3.08e-13!18;UBERON:0000487!1.40e-12!22;UBERON:0003103!1.02e-11!69;UBERON:0006914!3.60e-11!25;UBERON:0000922!9.79e-11!612;UBERON:0000926!1.17e-10!448;UBERON:0004120!1.17e-10!448;UBERON:0006603!1.17e-10!448;UBERON:0002050!1.91e-10!605;UBERON:0005423!1.91e-10!605;UBERON:0000923!3.53e-10!604;UBERON:0005291!3.53e-10!604;UBERON:0006598!3.53e-10!604;UBERON:0002532!3.53e-10!604;UBERON:0007100!3.80e-10!27;UBERON:0000948!6.30e-10!24;UBERON:0005498!6.30e-10!24;UBERON:0004140!6.30e-10!24;UBERON:0009881!6.30e-10!24;UBERON:0004141!6.30e-10!24;UBERON:0003084!6.30e-10!24;UBERON:0007005!6.30e-10!24;UBERON:0004139!6.30e-10!24;UBERON:0004291!6.30e-10!24;UBERON:0000947!1.62e-09!21;UBERON:0010191!1.62e-09!21;UBERON:0003915!2.49e-07!9;UBERON:0004700!2.49e-07!9;UBERON:0001917!2.49e-07!9;UBERON:0000479!6.07e-07!787 | ||
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| ||
|short_description=p3@GNG11 | |short_description=p3@GNG11 | ||
}} | }} |
Latest revision as of 01:46, 20 September 2015
Short description: | p3@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNG11_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 16bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.31e-28 | 121 |
muscle precursor cell | 1.59e-20 | 58 |
myoblast | 1.59e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.59e-20 | 58 |
muscle cell | 7.85e-20 | 55 |
smooth muscle cell | 2.04e-18 | 43 |
smooth muscle myoblast | 2.04e-18 | 43 |
endothelial cell | 3.59e-18 | 36 |
endothelial cell of vascular tree | 1.41e-17 | 24 |
electrically responsive cell | 4.53e-16 | 61 |
electrically active cell | 4.53e-16 | 61 |
vascular associated smooth muscle cell | 8.84e-16 | 32 |
meso-epithelial cell | 4.11e-15 | 45 |
blood vessel endothelial cell | 1.29e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.29e-13 | 18 |
fibroblast | 3.79e-11 | 76 |
lining cell | 2.66e-09 | 58 |
barrier cell | 2.66e-09 | 58 |
cardiocyte | 9.54e-08 | 16 |
endothelial cell of artery | 1.62e-07 | 9 |
kidney cell | 7.25e-07 | 17 |
kidney epithelial cell | 7.25e-07 | 17 |