FFCP PHASE1:Hg19::chr10:120789223..120789231,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340719 | |EntrezGene=340719 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23044 | |HGNC=23044 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WY41 | |UniProt=Q8WY41 | ||
|association_with_transcript=0bp_to_ENST00000425699,NM_199461,uc009xzf.1_5end | |association_with_transcript=0bp_to_ENST00000425699,NM_199461,uc009xzf.1_5end | ||
|cluster_id=chr10:120789223..120789231,+ | |||
|description=CAGE_peak_1_at_NANOS1_5end | |description=CAGE_peak_1_at_NANOS1_5end | ||
|id=chr10:120789223..120789231,+ | |id=chr10:120789223..120789231,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.78e-13!254 | |ontology_enrichment_celltype=CL:0000066!1.78e-13!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.56e-14,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.30e-15!106;DOID:0050687!2.87e-15!143;DOID:162!7.00e-13!235;DOID:14566!1.60e-11!239 | |ontology_enrichment_disease=DOID:305!1.30e-15!106;DOID:0050687!2.87e-15!143;DOID:162!7.00e-13!235;DOID:14566!1.60e-11!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.78e-15,106;DOID:0050687,8.74e-14,143;DOID:162,2.62e-09,235;DOID:14566,2.59e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0003075!8.20e-13!86;UBERON:0007284!8.20e-13!86;UBERON:0004121!5.79e-12!169;UBERON:0005743!1.09e-11!86;UBERON:0000073!1.83e-11!94;UBERON:0001016!1.83e-11!94;UBERON:0002346!1.96e-11!90;UBERON:0000924!4.38e-11!173;UBERON:0006601!4.38e-11!173;UBERON:0000064!1.14e-10!219;UBERON:0000033!1.61e-10!123;UBERON:0000153!2.67e-10!129;UBERON:0007811!2.67e-10!129;UBERON:0001017!4.41e-10!82;UBERON:0000955!1.13e-08!69;UBERON:0006238!1.13e-08!69;UBERON:0001049!1.59e-08!57;UBERON:0005068!1.59e-08!57;UBERON:0006241!1.59e-08!57;UBERON:0007135!1.59e-08!57;UBERON:0003056!1.81e-08!61;UBERON:0002616!6.92e-08!59;UBERON:0001048!1.31e-07!168;UBERON:0000481!1.46e-07!347;UBERON:0000062!6.41e-07!511;UBERON:0000475!7.35e-07!365 | |ontology_enrichment_uberon=UBERON:0003075!8.20e-13!86;UBERON:0007284!8.20e-13!86;UBERON:0004121!5.79e-12!169;UBERON:0005743!1.09e-11!86;UBERON:0000073!1.83e-11!94;UBERON:0001016!1.83e-11!94;UBERON:0002346!1.96e-11!90;UBERON:0000924!4.38e-11!173;UBERON:0006601!4.38e-11!173;UBERON:0000064!1.14e-10!219;UBERON:0000033!1.61e-10!123;UBERON:0000153!2.67e-10!129;UBERON:0007811!2.67e-10!129;UBERON:0001017!4.41e-10!82;UBERON:0000955!1.13e-08!69;UBERON:0006238!1.13e-08!69;UBERON:0001049!1.59e-08!57;UBERON:0005068!1.59e-08!57;UBERON:0006241!1.59e-08!57;UBERON:0007135!1.59e-08!57;UBERON:0003056!1.81e-08!61;UBERON:0002616!6.92e-08!59;UBERON:0001048!1.31e-07!168;UBERON:0000481!1.46e-07!347;UBERON:0000062!6.41e-07!511;UBERON:0000475!7.35e-07!365 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,7.87e-14,82;UBERON:0007284,7.87e-14,82;UBERON:0010371,2.14e-13,104;UBERON:0002346,5.20e-12,86;UBERON:0004121,3.64e-11,171;UBERON:0000924,3.64e-11,171;UBERON:0006601,3.64e-11,171;UBERON:0001017,5.66e-10,81;UBERON:0001016,1.42e-09,89;UBERON:0010314,2.14e-09,132;UBERON:0003056,1.29e-08,61;UBERON:0011216,1.36e-08,223;UBERON:0001049,1.37e-08,56;UBERON:0005068,1.37e-08,56;UBERON:0006241,1.37e-08,56;UBERON:0007135,1.37e-08,56;UBERON:0000955,2.34e-08,68;UBERON:0006238,2.34e-08,68;UBERON:0000073,1.95e-07,53;UBERON:0002616,1.95e-07,53;UBERON:0001048,2.84e-07,160 | |||
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| ||
|short_description=p1@NANOS1 | |short_description=p1@NANOS1 | ||
}} | }} |
Latest revision as of 16:35, 16 September 2015
Short description: | p1@NANOS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NANOS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000425699, NM_199461, uc009xzf.1_5end |
EntrezGene: | NANOS1 |
HGNC: | 23044 |
UniProt: | Q8WY41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.56e-14 | 253 |
Ontology term | p-value | n |
---|---|---|
neural plate | 7.87e-14 | 82 |
presumptive neural plate | 7.87e-14 | 82 |
ecto-epithelium | 2.14e-13 | 104 |
neurectoderm | 5.20e-12 | 86 |
ectoderm-derived structure | 3.64e-11 | 171 |
ectoderm | 3.64e-11 | 171 |
presumptive ectoderm | 3.64e-11 | 171 |
central nervous system | 5.66e-10 | 81 |
nervous system | 1.42e-09 | 89 |
structure with developmental contribution from neural crest | 2.14e-09 | 132 |
pre-chordal neural plate | 1.29e-08 | 61 |
organ system subdivision | 1.36e-08 | 223 |
neural tube | 1.37e-08 | 56 |
neural rod | 1.37e-08 | 56 |
future spinal cord | 1.37e-08 | 56 |
neural keel | 1.37e-08 | 56 |
brain | 2.34e-08 | 68 |
future brain | 2.34e-08 | 68 |
regional part of nervous system | 1.95e-07 | 53 |
regional part of brain | 1.95e-07 | 53 |
primordium | 2.84e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.78e-15 | 106 |
cell type cancer | 8.74e-14 | 143 |
cancer | 2.62e-09 | 235 |
disease of cellular proliferation | 2.59e-08 | 239 |