FFCP PHASE1:Hg19::chr2:220417397..220417468,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23363 | |EntrezGene=23363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29092 | |HGNC=29092 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000489804_5end | |association_with_transcript=0bp_to_ENST00000489804_5end | ||
|cluster_id=chr2:220417397..220417468,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_OBSL1_5end | |description=CAGE_peak_4_at_OBSL1_5end | ||
|id=chr2:220417397..220417468,- | |id=chr2:220417397..220417468,- | ||
|ontology_enrichment_celltype=CL:0002321!4.51e-10!248;CL:0000055!1.15e-09!180;CL:0000220!1.65e-09!246;CL:0000393!5.82e-09!60;CL:0000211!5.82e-09!60;CL:0000183!2.06e-08!59;CL:0000221!9.95e-08!71;CL:0000187!2.39e-07!54;CL:0000680!3.40e-07!57;CL:0000056!3.40e-07!57;CL:0000355!3.40e-07!57 | |ontology_enrichment_celltype=CL:0002321!4.51e-10!248;CL:0000055!1.15e-09!180;CL:0000220!1.65e-09!246;CL:0000393!5.82e-09!60;CL:0000211!5.82e-09!60;CL:0000183!2.06e-08!59;CL:0000221!9.95e-08!71;CL:0000187!2.39e-07!54;CL:0000680!3.40e-07!57;CL:0000056!3.40e-07!57;CL:0000355!3.40e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:1000507;9.77e-07;10!CL:1000494;9.77e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.98e-09,250;CL:0000393,2.56e-07,61;CL:0000211,2.56e-07,61;CL:1000507,2.96e-07,10;CL:1000494,2.96e-07,10;CL:0000221,4.33e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.91e-20!365;UBERON:0000481!3.26e-18!347;UBERON:0000119!4.23e-13!312;UBERON:0000483!8.91e-13!309;UBERON:0004121!1.19e-12!169;UBERON:0000924!3.91e-12!173;UBERON:0006601!3.91e-12!173;UBERON:0000468!5.79e-12!659;UBERON:0005743!6.20e-12!86;UBERON:0000064!7.08e-12!219;UBERON:0003075!8.37e-11!86;UBERON:0007284!8.37e-11!86;UBERON:0000922!8.73e-11!612;UBERON:0001017!1.18e-10!82;UBERON:0000073!1.96e-10!94;UBERON:0001016!1.96e-10!94;UBERON:0000033!2.34e-10!123;UBERON:0002346!4.65e-10!90;UBERON:0002100!6.84e-10!216;UBERON:0000062!4.73e-09!511;UBERON:0002050!4.77e-09!605;UBERON:0005423!4.77e-09!605;UBERON:0000153!8.25e-09!129;UBERON:0007811!8.25e-09!129;UBERON:0000923!8.30e-09!604;UBERON:0005291!8.30e-09!604;UBERON:0006598!8.30e-09!604;UBERON:0002532!8.30e-09!604;UBERON:0000955!1.73e-08!69;UBERON:0006238!1.73e-08!69;UBERON:0005256!2.25e-08!143;UBERON:0000467!4.35e-08!625;UBERON:0000480!7.01e-08!626;UBERON:0002616!8.05e-08!59;UBERON:0003104!8.44e-08!238;UBERON:0009142!8.44e-08!238;UBERON:0001049!1.75e-07!57;UBERON:0005068!1.75e-07!57;UBERON:0006241!1.75e-07!57;UBERON:0007135!1.75e-07!57;UBERON:0000486!2.17e-07!82;UBERON:0003056!2.21e-07!61;UBERON:0002385!8.14e-07!63;UBERON:0001015!8.14e-07!63;UBERON:0000383!8.14e-07!63;UBERON:0001134!8.40e-07!61;UBERON:0002036!8.40e-07!61;UBERON:0003082!8.40e-07!61 | |ontology_enrichment_uberon=UBERON:0000475!1.91e-20!365;UBERON:0000481!3.26e-18!347;UBERON:0000119!4.23e-13!312;UBERON:0000483!8.91e-13!309;UBERON:0004121!1.19e-12!169;UBERON:0000924!3.91e-12!173;UBERON:0006601!3.91e-12!173;UBERON:0000468!5.79e-12!659;UBERON:0005743!6.20e-12!86;UBERON:0000064!7.08e-12!219;UBERON:0003075!8.37e-11!86;UBERON:0007284!8.37e-11!86;UBERON:0000922!8.73e-11!612;UBERON:0001017!1.18e-10!82;UBERON:0000073!1.96e-10!94;UBERON:0001016!1.96e-10!94;UBERON:0000033!2.34e-10!123;UBERON:0002346!4.65e-10!90;UBERON:0002100!6.84e-10!216;UBERON:0000062!4.73e-09!511;UBERON:0002050!4.77e-09!605;UBERON:0005423!4.77e-09!605;UBERON:0000153!8.25e-09!129;UBERON:0007811!8.25e-09!129;UBERON:0000923!8.30e-09!604;UBERON:0005291!8.30e-09!604;UBERON:0006598!8.30e-09!604;UBERON:0002532!8.30e-09!604;UBERON:0000955!1.73e-08!69;UBERON:0006238!1.73e-08!69;UBERON:0005256!2.25e-08!143;UBERON:0000467!4.35e-08!625;UBERON:0000480!7.01e-08!626;UBERON:0002616!8.05e-08!59;UBERON:0003104!8.44e-08!238;UBERON:0009142!8.44e-08!238;UBERON:0001049!1.75e-07!57;UBERON:0005068!1.75e-07!57;UBERON:0006241!1.75e-07!57;UBERON:0007135!1.75e-07!57;UBERON:0000486!2.17e-07!82;UBERON:0003056!2.21e-07!61;UBERON:0002385!8.14e-07!63;UBERON:0001015!8.14e-07!63;UBERON:0000383!8.14e-07!63;UBERON:0001134!8.40e-07!61;UBERON:0002036!8.40e-07!61;UBERON:0003082!8.40e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;9.77e-07;10!UBERON:0009773;9.77e-07;10!UBERON:0001231;9.77e-07;10!UBERON:0004810;9.77e-07;10 | |||
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| ||
|short_description=p4@OBSL1 | |short_description=p4@OBSL1 | ||
}} | }} |
Latest revision as of 21:54, 24 September 2015
Short description: | p4@OBSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OBSL1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000489804_5end |
EntrezGene: | OBSL1 |
HGNC: | 29092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.98e-09 | 250 |
electrically responsive cell | 2.56e-07 | 61 |
electrically active cell | 2.56e-07 | 61 |
kidney tubule cell | 2.96e-07 | 10 |
nephron tubule epithelial cell | 2.96e-07 | 10 |
ectodermal cell | 4.33e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.69e-11 | 104 |
neural plate | 9.68e-11 | 82 |
presumptive neural plate | 9.68e-11 | 82 |
cell layer | 2.36e-10 | 309 |
epithelium | 3.63e-10 | 306 |
ectoderm-derived structure | 6.52e-10 | 171 |
ectoderm | 6.52e-10 | 171 |
presumptive ectoderm | 6.52e-10 | 171 |
central nervous system | 1.73e-09 | 81 |
neurectoderm | 2.24e-09 | 86 |
nervous system | 2.93e-08 | 89 |
structure with developmental contribution from neural crest | 6.76e-08 | 132 |
brain | 1.39e-07 | 68 |
future brain | 1.39e-07 | 68 |
nephron tubule epithelium | 2.96e-07 | 10 |
neural tube | 5.54e-07 | 56 |
neural rod | 5.54e-07 | 56 |
future spinal cord | 5.54e-07 | 56 |
neural keel | 5.54e-07 | 56 |
embryo | 6.00e-07 | 592 |
pre-chordal neural plate | 8.05e-07 | 61 |