FFCP PHASE1:Hg19::chr17:42984138..42984151,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-267bp_to_U92979_5end | |association_with_transcript=-267bp_to_U92979_5end | ||
|cluster_id=chr17:42984138..42984151,- | |||
|coexpression_cluster_id=C291 | |coexpression_cluster_id=C291 | ||
|description=CAGE_peak_38_at_GFAP_5end | |description=CAGE_peak_38_at_GFAP_5end | ||
|id=chr17:42984138..42984151,- | |id=chr17:42984138..42984151,- | ||
|ontology_enrichment_celltype=CL:0002605!8.76e-15!3 | |ontology_enrichment_celltype=CL:0002605!8.76e-15!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.50e-34;3!UBERON:0003057;5.50e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.27e-107!57;UBERON:0005068!6.27e-107!57;UBERON:0006241!6.27e-107!57;UBERON:0007135!6.27e-107!57;UBERON:0001017!4.22e-89!82;UBERON:0002616!4.50e-86!59;UBERON:0005743!1.07e-84!86;UBERON:0002780!2.59e-78!41;UBERON:0001890!2.59e-78!41;UBERON:0006240!2.59e-78!41;UBERON:0003080!2.41e-76!42;UBERON:0000955!2.61e-76!69;UBERON:0006238!2.61e-76!69;UBERON:0000073!4.14e-76!94;UBERON:0001016!4.14e-76!94;UBERON:0002020!1.54e-75!34;UBERON:0003528!1.54e-75!34;UBERON:0001893!8.49e-75!34;UBERON:0003075!6.66e-73!86;UBERON:0007284!6.66e-73!86;UBERON:0002791!4.81e-71!33;UBERON:0002346!2.33e-69!90;UBERON:0001869!6.66e-67!32;UBERON:0000956!1.77e-52!25;UBERON:0000203!1.77e-52!25;UBERON:0003056!5.45e-51!61;UBERON:0007023!2.67e-47!115;UBERON:0000033!8.90e-43!123;UBERON:0002619!7.67e-41!22;UBERON:0000153!1.82e-40!129;UBERON:0007811!1.82e-40!129;UBERON:0004121!1.86e-39!169;UBERON:0001950!3.95e-39!20;UBERON:0000924!2.24e-38!173;UBERON:0006601!2.24e-38!173;UBERON:0003076!5.68e-30!15;UBERON:0003057!5.68e-30!15;UBERON:0002298!2.49e-28!8;UBERON:0000025!2.33e-26!194;UBERON:0002308!3.77e-24!9;UBERON:0000125!3.77e-24!9;UBERON:0002420!4.05e-24!9;UBERON:0007245!4.05e-24!9;UBERON:0010009!4.05e-24!9;UBERON:0010011!4.05e-24!9;UBERON:0000454!4.05e-24!9;UBERON:0001871!2.01e-20!7;UBERON:0004111!1.05e-19!241;UBERON:0004733!1.81e-18!12;UBERON:0002028!1.81e-18!12;UBERON:0007277!1.81e-18!12;UBERON:0000200!1.87e-18!6;UBERON:0004732!5.65e-17!13;UBERON:0000477!1.41e-16!286;UBERON:0009663!6.44e-16!7;UBERON:0002240!2.45e-15!3;UBERON:0001896!3.94e-15!3;UBERON:0006331!3.94e-15!3;UBERON:0005290!3.94e-15!3;UBERON:0010096!3.94e-15!3;UBERON:0000349!5.56e-15!5;UBERON:0000483!9.43e-15!309;UBERON:0000988!9.62e-15!3;UBERON:0000119!1.56e-14!312;UBERON:0002771!2.66e-14!3;UBERON:0000064!4.65e-13!219;UBERON:0000475!3.56e-12!365;UBERON:0002148!1.04e-10!2;UBERON:0009662!1.04e-10!2;UBERON:0001876!1.14e-10!2;UBERON:0000369!2.51e-10!4;UBERON:0002435!2.51e-10!4;UBERON:0000204!2.51e-10!4;UBERON:0010082!2.51e-10!4;UBERON:0005174!2.22e-09!5;UBERON:0001137!2.22e-09!5;UBERON:0002021!4.32e-09!5;UBERON:0002680!1.75e-08!9;UBERON:0001895!1.75e-08!9;UBERON:0010092!1.75e-08!9;UBERON:0001872!2.17e-08!5;UBERON:0000062!1.14e-07!511;UBERON:0005383!9.91e-07!3;UBERON:0005382!9.91e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!6.27e-107!57;UBERON:0005068!6.27e-107!57;UBERON:0006241!6.27e-107!57;UBERON:0007135!6.27e-107!57;UBERON:0001017!4.22e-89!82;UBERON:0002616!4.50e-86!59;UBERON:0005743!1.07e-84!86;UBERON:0002780!2.59e-78!41;UBERON:0001890!2.59e-78!41;UBERON:0006240!2.59e-78!41;UBERON:0003080!2.41e-76!42;UBERON:0000955!2.61e-76!69;UBERON:0006238!2.61e-76!69;UBERON:0000073!4.14e-76!94;UBERON:0001016!4.14e-76!94;UBERON:0002020!1.54e-75!34;UBERON:0003528!1.54e-75!34;UBERON:0001893!8.49e-75!34;UBERON:0003075!6.66e-73!86;UBERON:0007284!6.66e-73!86;UBERON:0002791!4.81e-71!33;UBERON:0002346!2.33e-69!90;UBERON:0001869!6.66e-67!32;UBERON:0000956!1.77e-52!25;UBERON:0000203!1.77e-52!25;UBERON:0003056!5.45e-51!61;UBERON:0007023!2.67e-47!115;UBERON:0000033!8.90e-43!123;UBERON:0002619!7.67e-41!22;UBERON:0000153!1.82e-40!129;UBERON:0007811!1.82e-40!129;UBERON:0004121!1.86e-39!169;UBERON:0001950!3.95e-39!20;UBERON:0000924!2.24e-38!173;UBERON:0006601!2.24e-38!173;UBERON:0003076!5.68e-30!15;UBERON:0003057!5.68e-30!15;UBERON:0002298!2.49e-28!8;UBERON:0000025!2.33e-26!194;UBERON:0002308!3.77e-24!9;UBERON:0000125!3.77e-24!9;UBERON:0002420!4.05e-24!9;UBERON:0007245!4.05e-24!9;UBERON:0010009!4.05e-24!9;UBERON:0010011!4.05e-24!9;UBERON:0000454!4.05e-24!9;UBERON:0001871!2.01e-20!7;UBERON:0004111!1.05e-19!241;UBERON:0004733!1.81e-18!12;UBERON:0002028!1.81e-18!12;UBERON:0007277!1.81e-18!12;UBERON:0000200!1.87e-18!6;UBERON:0004732!5.65e-17!13;UBERON:0000477!1.41e-16!286;UBERON:0009663!6.44e-16!7;UBERON:0002240!2.45e-15!3;UBERON:0001896!3.94e-15!3;UBERON:0006331!3.94e-15!3;UBERON:0005290!3.94e-15!3;UBERON:0010096!3.94e-15!3;UBERON:0000349!5.56e-15!5;UBERON:0000483!9.43e-15!309;UBERON:0000988!9.62e-15!3;UBERON:0000119!1.56e-14!312;UBERON:0002771!2.66e-14!3;UBERON:0000064!4.65e-13!219;UBERON:0000475!3.56e-12!365;UBERON:0002148!1.04e-10!2;UBERON:0009662!1.04e-10!2;UBERON:0001876!1.14e-10!2;UBERON:0000369!2.51e-10!4;UBERON:0002435!2.51e-10!4;UBERON:0000204!2.51e-10!4;UBERON:0010082!2.51e-10!4;UBERON:0005174!2.22e-09!5;UBERON:0001137!2.22e-09!5;UBERON:0002021!4.32e-09!5;UBERON:0002680!1.75e-08!9;UBERON:0001895!1.75e-08!9;UBERON:0010092!1.75e-08!9;UBERON:0001872!2.17e-08!5;UBERON:0000062!1.14e-07!511;UBERON:0005383!9.91e-07!3;UBERON:0005382!9.91e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;5.50e-34;3!UBERON:0005174;5.50e-34;3!UBERON:0001137;5.50e-34;3!UBERON:0003112;7.62e-26;1!UBERON:0011158;7.62e-26;1!UBERON:0003128;7.62e-26;1!UBERON:0001703;7.62e-26;1!UBERON:0002241;7.62e-26;1!UBERON:0002298;2.19e-17;6!UBERON:0002360;1.21e-13;2!UBERON:0002148;1.21e-13;2!UBERON:0006331;1.21e-13;2!UBERON:0009662;1.21e-13;2!UBERON:0000094;1.21e-13;2!UBERON:0010743;1.21e-13;2!UBERON:0001017;8.83e-10;75!UBERON:0000988;1.53e-09;3!UBERON:0001896;1.53e-09;3!UBERON:0005290;1.53e-09;3!UBERON:0004733;3.41e-09;12!UBERON:0002028;3.41e-09;12!UBERON:0004732;1.47e-08;13!UBERON:0001016;4.41e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.51e-34,3;UBERON:0005174,5.51e-34,3;UBERON:0001137,5.51e-34,3;UBERON:0003076,7.74e-27,15;UBERON:0003057,7.74e-27,15;UBERON:0003112,1.26e-25,1;UBERON:0011158,1.26e-25,1;UBERON:0003128,1.26e-25,1;UBERON:0001703,1.26e-25,1;UBERON:0002241,1.26e-25,1;UBERON:0004761,1.26e-25,1;UBERON:0009617,1.26e-25,1;UBERON:0002298,1.71e-17,6;UBERON:0001017,1.11e-14,81;UBERON:0002148,1.07e-13,2;UBERON:0006331,1.07e-13,2;UBERON:0009662,1.07e-13,2;UBERON:0002360,1.37e-13,2;UBERON:0000094,1.37e-13,2;UBERON:0010743,1.37e-13,2;UBERON:0005253,1.55e-13,2;UBERON:0001016,3.00e-13,89;UBERON:0001049,3.72e-11,56;UBERON:0005068,3.72e-11,56;UBERON:0006241,3.72e-11,56;UBERON:0007135,3.72e-11,56;UBERON:0007023,1.20e-10,114;UBERON:0001896,1.30e-09,3;UBERON:0005290,1.30e-09,3;UBERON:0010096,1.30e-09,3;UBERON:0000988,1.41e-09,3;UBERON:0004733,3.01e-09,12;UBERON:0002028,3.01e-09,12;UBERON:0007277,3.01e-09,12;UBERON:0004732,1.31e-08,13;UBERON:0003075,1.01e-07,82;UBERON:0007284,1.01e-07,82;UBERON:0002346,2.26e-07,86;UBERON:0004121,5.65e-07,171;UBERON:0000924,5.65e-07,171;UBERON:0006601,5.65e-07,171;UBERON:0011216,6.23e-07,223;UBERON:0010314,8.82e-07,132 | |||
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|short_description=p38@GFAP | |short_description=p38@GFAP | ||
}} | }} |
Latest revision as of 23:18, 24 September 2015
Short description: | p38@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_GFAP_5end |
Coexpression cluster: | C291_spinal_substantia_retina_medulla_tongue_skeletal_trachea |
Association with transcript: | -267bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data