FFCP PHASE1:Hg19::chr1:39796871..39796876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23499 | |EntrezGene=23499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |HGNC=13664 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PK2 | |UniProt=Q96PK2 | ||
|association_with_transcript=61bp_to_ENST00000289893,uc010oiu.1_5end | |association_with_transcript=61bp_to_ENST00000289893,uc010oiu.1_5end | ||
|cluster_id=chr1:39796871..39796876,+ | |||
|coexpression_cluster_id=C32 | |coexpression_cluster_id=C32 | ||
|description=CAGE_peak_16_at_MACF1_5end | |description=CAGE_peak_16_at_MACF1_5end | ||
|id=chr1:39796871..39796876,+ | |id=chr1:39796871..39796876,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-12!115;UBERON:0001049!4.12e-12!57;UBERON:0005068!4.12e-12!57;UBERON:0006241!4.12e-12!57;UBERON:0007135!4.12e-12!57;UBERON:0002780!3.69e-11!41;UBERON:0001890!3.69e-11!41;UBERON:0006240!3.69e-11!41;UBERON:0002020!6.16e-11!34;UBERON:0003528!6.16e-11!34;UBERON:0003080!1.56e-10!42;UBERON:0001893!3.13e-10!34;UBERON:0002791!4.54e-10!33;UBERON:0002616!1.09e-09!59;UBERON:0001869!1.53e-09!32;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0001017!2.34e-08!82;UBERON:0003075!3.70e-08!86;UBERON:0007284!3.70e-08!86;UBERON:0005743!7.49e-08!86;UBERON:0002346!1.15e-07!90;UBERON:0002619!1.32e-07!22;UBERON:0000073!4.05e-07!94;UBERON:0001016!4.05e-07!94;UBERON:0000956!4.24e-07!25;UBERON:0000203!4.24e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!1.19e-12!115;UBERON:0001049!4.12e-12!57;UBERON:0005068!4.12e-12!57;UBERON:0006241!4.12e-12!57;UBERON:0007135!4.12e-12!57;UBERON:0002780!3.69e-11!41;UBERON:0001890!3.69e-11!41;UBERON:0006240!3.69e-11!41;UBERON:0002020!6.16e-11!34;UBERON:0003528!6.16e-11!34;UBERON:0003080!1.56e-10!42;UBERON:0001893!3.13e-10!34;UBERON:0002791!4.54e-10!33;UBERON:0002616!1.09e-09!59;UBERON:0001869!1.53e-09!32;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0001017!2.34e-08!82;UBERON:0003075!3.70e-08!86;UBERON:0007284!3.70e-08!86;UBERON:0005743!7.49e-08!86;UBERON:0002346!1.15e-07!90;UBERON:0002619!1.32e-07!22;UBERON:0000073!4.05e-07!94;UBERON:0001016!4.05e-07!94;UBERON:0000956!4.24e-07!25;UBERON:0000203!4.24e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.29e-12;41!UBERON:0001890;3.29e-12;41!UBERON:0002619;1.29e-11;22!UBERON:0002791;5.77e-11;32!UBERON:0003528;7.59e-11;34!UBERON:0002020;7.59e-11;34!UBERON:0000956;5.68e-10;25!UBERON:0000203;5.68e-10;25!UBERON:0001869;1.90e-09;32!UBERON:0000073;2.26e-09;53!UBERON:0002616;2.26e-09;53!UBERON:0001893;6.63e-09;34!UBERON:0001950;1.24e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.40e-17,56;UBERON:0005068,8.40e-17,56;UBERON:0006241,8.40e-17,56;UBERON:0007135,8.40e-17,56;UBERON:0000073,1.57e-14,53;UBERON:0002616,1.57e-14,53;UBERON:0002780,5.30e-14,41;UBERON:0001890,5.30e-14,41;UBERON:0003080,5.30e-14,41;UBERON:0006240,5.30e-14,41;UBERON:0003528,1.69e-13,34;UBERON:0002020,1.69e-13,34;UBERON:0002791,1.83e-12,32;UBERON:0002619,1.48e-11,22;UBERON:0001893,1.52e-11,34;UBERON:0000955,3.94e-11,68;UBERON:0006238,3.94e-11,68;UBERON:0003075,8.90e-11,82;UBERON:0007284,8.90e-11,82;UBERON:0001017,1.06e-10,81;UBERON:0001869,1.47e-10,32;UBERON:0001016,4.14e-10,89;UBERON:0002346,5.31e-10,86;UBERON:0000956,6.39e-10,25;UBERON:0000203,6.39e-10,25;UBERON:0003056,3.18e-09,61;UBERON:0007023,3.42e-09,114;UBERON:0001950,1.61e-08,20;UBERON:0010371,4.20e-08,104 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0,0.152826811495903,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0.619737604642413,0.284338464974843,0.293600439334847,0.553995408531877,0.601633342410425,0.434021741431704,0,1.6194683300949,0,0,0,0,0,0,0.619412741790207,2.01384674625505,1.0246428261164,0.236482229888585,0,0,0,0,0.545812300115692,0,0.306083892370903,0,0.639337125799041,0,0.598390972864896,1.70489900213078,0.580418477257168,0,0,0.75374599577023,1.5644487552606,0,1.21079900526674,0,0,0,0,0.209658645508376,0,0,0,0,0,0.365328307529268,0,0,0,1.70692089026603,1.20118796110804,0,0,0,0,0,0,0,0,1.05353633910031,0,0.393010762749165,0.616804496998528,0.501559486172034,0,0,0,0.111410456885174,0.294605907474837,0,0,0.512365278902701,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.453237370790265,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,1.60464117470104,1.01377082717959,0,0,0,0.361439152384566,0,0.289693037921647,0.795285947051099,0,0,0,0.351339142772504,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0,0,0,0.371457501329565,1.19257444420023,0,0.694281003215189,0,0,0,0.208994966536811,1.03366703667732,1.06729878806013,0,0,0.760272105718513,0,0,0,1.42879565254528,0.898117490504679,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.794455084879313,1.72101972449288,0,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0.490385709340376,0,0,0,0,0.570471821544449,0,0.352303495931295,0,0,0.61246251376468,0.491337269247072,0,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0.45071417671979,0,0.538168907066586,0,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,1.77504796258307,0.201504196455281,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0.72995471815166,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0.441463099414651,0,0,0.219500570817251,0,0.201057944823262,0,0,0,0,0.463721619900307,0,0,0,0.570762456703795,0,0,0.246217006087397,1.17002132569619,0.148631162288728,0,0.335964256397719,0,0.179117045405697,0.290633938513962,0,1.97065295158377,0.528290604079356,1.03664057770386,0.288239906833923,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.775630294546667,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.410952645100767,0,0.672510863961164,0.197030760201927,0.215627574859517,1.15508732651774,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0.82707210449155,1.2942852049117,0.106727557803444,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0,0,0.154209693802656,0,0.410635780069046,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,1.54561517471583,0.366277859273374,0.660075999364704,0,0,0,0.193341436584244,0,0,0.551346289938122,0.322260734604821,0,0.170453254832202,0,0.165284915360978,0,0.382838137483752,0.2023155617111,0,1.5740617341532,0,0,0,0,0,0.429374660225974,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0.731140468893853,0,0.818999468447914,0.707027159768564,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0.229723400206959,0,0,0,0.238231775457789,1.64544909234478,0,0,0,0.320472213382419,0,0,0.371606350251437,0.28853842595289,0.213425530045242,0.797131363644112,0.199579371432817,0.191505370132367,2.75175657541048,0.973865820823666,1.12318871245384,0.228234679033192,0,2.50634477090067,0,0.321176150207399,0,1.27753871307098,0,0.614481528616916,0,0.166849141711909,0.19538809540204,0,0,0.811367035427949,1.99843180798692,0,0,0.146508179271894,0.242721043499027,0,1.70481688083848,0.23874448473769,0,0,0,6.04878490565205,0,0,0.211125408127993,0.796991953004279,1.38141957765574,0,1.43176155503017,0.123084805461069,0.311039587661807,0.539210106883961,0.179021174675609,0,0.197286811273867,0,0,0,0.74214478529481,0,0.260427761085233,0,0,0,0.254253650292766,0,0,1.16641845353302,0.173624994933292,0.885741385813839,4.22087535188928,0,4.20201187738654,0,0.219385397153973,0,0.41827123283581,1.23120413606075,0.341826167541004,0.46112780877612,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0.997270091400938,0.225595660617181,0.392125068635479,0.167821586975843,0.189753732724185,0.158936578980379,0.421996129056054,0.163232808159148,0,0,0.995261931078505,0.265372693510018,0,0.296521128680622,0.2471278778930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| ||
|short_description=p16@MACF1 | |short_description=p16@MACF1 | ||
}} | }} |
Latest revision as of 23:44, 17 September 2015
Short description: | p16@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MACF1_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 61bp_to_ENST00000289893, uc010oiu.1_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | Q96PK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 8.40e-17 | 56 |
neural rod | 8.40e-17 | 56 |
future spinal cord | 8.40e-17 | 56 |
neural keel | 8.40e-17 | 56 |
regional part of nervous system | 1.57e-14 | 53 |
regional part of brain | 1.57e-14 | 53 |
regional part of forebrain | 5.30e-14 | 41 |
forebrain | 5.30e-14 | 41 |
anterior neural tube | 5.30e-14 | 41 |
future forebrain | 5.30e-14 | 41 |
brain grey matter | 1.69e-13 | 34 |
gray matter | 1.69e-13 | 34 |
regional part of telencephalon | 1.83e-12 | 32 |
regional part of cerebral cortex | 1.48e-11 | 22 |
telencephalon | 1.52e-11 | 34 |
brain | 3.94e-11 | 68 |
future brain | 3.94e-11 | 68 |
neural plate | 8.90e-11 | 82 |
presumptive neural plate | 8.90e-11 | 82 |
central nervous system | 1.06e-10 | 81 |
cerebral hemisphere | 1.47e-10 | 32 |
nervous system | 4.14e-10 | 89 |
neurectoderm | 5.31e-10 | 86 |
cerebral cortex | 6.39e-10 | 25 |
pallium | 6.39e-10 | 25 |
pre-chordal neural plate | 3.18e-09 | 61 |
adult organism | 3.42e-09 | 114 |
neocortex | 1.61e-08 | 20 |
ecto-epithelium | 4.20e-08 | 104 |