FFCP PHASE1:Hg19::chr9:118915863..118915909,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt=Q13219,Q7Z613,Q86YM8,Q8IWT8 | |UniProt=Q13219,Q7Z613,Q86YM8,Q8IWT8 | ||
|association_with_transcript=-161bp_to_NM_002581,uc004bjn.2_5end | |association_with_transcript=-161bp_to_NM_002581,uc004bjn.2_5end | ||
|cluster_id=chr9:118915863..118915909,+ | |||
|coexpression_cluster_id=C4794 | |coexpression_cluster_id=C4794 | ||
|description=CAGE_peak_4_at_PAPPA_5end | |description=CAGE_peak_4_at_PAPPA_5end | ||
|id=chr9:118915863..118915909,+ | |id=chr9:118915863..118915909,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.25e-41!180;CL:0000057!2.07e-26!75;CL:0000187!1.32e-23!54;CL:0000680!1.21e-22!57;CL:0000056!1.21e-22!57;CL:0000355!1.21e-22!57;CL:0000183!6.21e-22!59;CL:0000393!2.50e-19!60;CL:0000211!2.50e-19!60;CL:0000192!1.60e-17!42;CL:0000514!1.60e-17!42;CL:0000359!1.93e-13!32;CL:0002620!3.51e-11!23;CL:0002494!8.06e-10!16;CL:0000048!1.94e-09!430;CL:0000723!1.04e-08!436;CL:0000034!3.49e-08!444;CL:0000222!4.54e-08!119 | |ontology_enrichment_celltype=CL:0000055!2.25e-41!180;CL:0000057!2.07e-26!75;CL:0000187!1.32e-23!54;CL:0000680!1.21e-22!57;CL:0000056!1.21e-22!57;CL:0000355!1.21e-22!57;CL:0000183!6.21e-22!59;CL:0000393!2.50e-19!60;CL:0000211!2.50e-19!60;CL:0000192!1.60e-17!42;CL:0000514!1.60e-17!42;CL:0000359!1.93e-13!32;CL:0002620!3.51e-11!23;CL:0002494!8.06e-10!16;CL:0000048!1.94e-09!430;CL:0000723!1.04e-08!436;CL:0000034!3.49e-08!444;CL:0000222!4.54e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000187;7.04e-16;55!CL:0000359;2.68e-15;32!CL:0000192;2.01e-14;43!CL:0002620;3.11e-13;23!CL:0000393;2.16e-12;61!CL:0000211;2.16e-12;61!CL:0002494;4.32e-12;16!CL:0000134;7.96e-12;55!CL:0000723;2.36e-11;61!CL:0000057;6.75e-11;73!CL:0000048;3.27e-10;58!CL:0000349;3.72e-08;19!CL:0002334;7.46e-08;12!CL:0002320;1.58e-07;188!CL:0000188;2.10e-07;9!CL:0000034;3.29e-07;69!CL:0002570;3.50e-07;8!CL:0002539;4.33e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.07e-29,76;CL:0000187,6.48e-28,55;CL:0000680,1.85e-25,58;CL:0000056,1.85e-25,58;CL:0000355,1.85e-25,58;CL:0000393,2.90e-23,61;CL:0000211,2.90e-23,61;CL:0000192,3.38e-20,43;CL:0000514,3.38e-20,43;CL:0000048,4.90e-19,427;CL:0000723,4.93e-18,433;CL:0000034,9.43e-17,441;CL:0000359,4.88e-16,32;CL:0002620,3.83e-13,23;CL:0002494,3.72e-12,16;CL:0000222,3.01e-09,121;CL:0002334,5.76e-08,12;CL:0000349,5.91e-08,19;CL:0000188,2.23e-07,9;CL:0002570,3.47e-07,8;CL:0002539,5.16e-07,10;CL:0002320,6.77e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;2.01e-14;43!CL:0000355;6.24e-14;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.01e-21!83;UBERON:0002329!1.01e-21!83;UBERON:0003077!1.01e-21!83;UBERON:0003059!1.01e-21!83;UBERON:0007282!1.01e-21!83;UBERON:0009618!1.01e-21!83;UBERON:0007285!1.01e-21!83;UBERON:0004290!9.89e-21!70;UBERON:0001134!4.30e-20!61;UBERON:0002036!4.30e-20!61;UBERON:0003082!4.30e-20!61;UBERON:0002385!2.91e-19!63;UBERON:0001015!2.91e-19!63;UBERON:0000383!2.91e-19!63;UBERON:0000486!8.88e-18!82;UBERON:0005256!5.15e-13!143;UBERON:0004872!7.06e-12!84;UBERON:0002100!2.70e-10!216;UBERON:0000475!1.24e-09!365;UBERON:0000948!1.66e-08!24;UBERON:0005498!1.66e-08!24;UBERON:0004140!1.66e-08!24;UBERON:0009881!1.66e-08!24;UBERON:0004141!1.66e-08!24;UBERON:0003084!1.66e-08!24;UBERON:0007005!1.66e-08!24;UBERON:0004139!1.66e-08!24;UBERON:0004291!1.66e-08!24;UBERON:0001637!4.08e-08!42;UBERON:0003509!4.08e-08!42;UBERON:0004572!4.08e-08!42;UBERON:0000481!4.93e-08!347;UBERON:0002049!6.24e-08!79;UBERON:0007798!6.24e-08!79;UBERON:0007100!6.68e-08!27;UBERON:0004535!9.24e-08!110;UBERON:0001009!1.09e-07!113;UBERON:0004573!1.28e-07!33;UBERON:0004571!1.28e-07!33;UBERON:0003104!1.44e-07!238;UBERON:0009142!1.44e-07!238;UBERON:0002199!3.01e-07!45;UBERON:0002416!3.01e-07!45;UBERON:0000490!3.28e-07!138;UBERON:0002097!8.39e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!1.01e-21!83;UBERON:0002329!1.01e-21!83;UBERON:0003077!1.01e-21!83;UBERON:0003059!1.01e-21!83;UBERON:0007282!1.01e-21!83;UBERON:0009618!1.01e-21!83;UBERON:0007285!1.01e-21!83;UBERON:0004290!9.89e-21!70;UBERON:0001134!4.30e-20!61;UBERON:0002036!4.30e-20!61;UBERON:0003082!4.30e-20!61;UBERON:0002385!2.91e-19!63;UBERON:0001015!2.91e-19!63;UBERON:0000383!2.91e-19!63;UBERON:0000486!8.88e-18!82;UBERON:0005256!5.15e-13!143;UBERON:0004872!7.06e-12!84;UBERON:0002100!2.70e-10!216;UBERON:0000475!1.24e-09!365;UBERON:0000948!1.66e-08!24;UBERON:0005498!1.66e-08!24;UBERON:0004140!1.66e-08!24;UBERON:0009881!1.66e-08!24;UBERON:0004141!1.66e-08!24;UBERON:0003084!1.66e-08!24;UBERON:0007005!1.66e-08!24;UBERON:0004139!1.66e-08!24;UBERON:0004291!1.66e-08!24;UBERON:0001637!4.08e-08!42;UBERON:0003509!4.08e-08!42;UBERON:0004572!4.08e-08!42;UBERON:0000481!4.93e-08!347;UBERON:0002049!6.24e-08!79;UBERON:0007798!6.24e-08!79;UBERON:0007100!6.68e-08!27;UBERON:0004535!9.24e-08!110;UBERON:0001009!1.09e-07!113;UBERON:0004573!1.28e-07!33;UBERON:0004571!1.28e-07!33;UBERON:0003104!1.44e-07!238;UBERON:0009142!1.44e-07!238;UBERON:0002199!3.01e-07!45;UBERON:0002416!3.01e-07!45;UBERON:0000490!3.28e-07!138;UBERON:0002097!8.39e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.25e-09;33!UBERON:0004571;5.25e-09;33!UBERON:0000948;2.18e-08;22!UBERON:0002385;3.11e-08;31!UBERON:0001015;3.11e-08;31!UBERON:0000383;3.11e-08;31!UBERON:0002384;4.25e-08;198!UBERON:0001135;1.48e-07;15!UBERON:0000478;1.53e-07;24!UBERON:0001637;2.31e-07;42!UBERON:0003509;2.31e-07;42!UBERON:0004572;2.31e-07;42!UBERON:0004237;4.33e-07;10!UBERON:0004695;4.33e-07;10!UBERON:0002111;4.33e-07;10!UBERON:0004178;4.33e-07;10!UBERON:0007100;9.94e-07;25 | |||
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| ||
|short_description=p4@PAPPA | |short_description=p4@PAPPA | ||
}} | }} |
Latest revision as of 17:47, 24 September 2015
Short description: | p4@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAPPA_5end |
Coexpression cluster: | C4794_placenta_Smooth_Fibroblast_neuroectodermal_Lens_mesenchymal_chorionic |
Association with transcript: | -161bp_to_NM_002581, uc004bjn.2_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219Q7Z613Q86YM8Q8IWT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.07e-29 | 76 |
muscle cell | 6.48e-28 | 55 |
muscle precursor cell | 1.85e-25 | 58 |
myoblast | 1.85e-25 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-25 | 58 |
electrically responsive cell | 2.90e-23 | 61 |
electrically active cell | 2.90e-23 | 61 |
smooth muscle cell | 3.38e-20 | 43 |
smooth muscle myoblast | 3.38e-20 | 43 |
multi fate stem cell | 4.90e-19 | 427 |
somatic stem cell | 4.93e-18 | 433 |
stem cell | 9.43e-17 | 441 |
vascular associated smooth muscle cell | 4.88e-16 | 32 |
skin fibroblast | 3.83e-13 | 23 |
cardiocyte | 3.72e-12 | 16 |
mesodermal cell | 3.01e-09 | 121 |
preadipocyte | 5.76e-08 | 12 |
extraembryonic cell | 5.91e-08 | 19 |
cell of skeletal muscle | 2.23e-07 | 9 |
mesenchymal stem cell of adipose | 3.47e-07 | 8 |
aortic smooth muscle cell | 5.16e-07 | 10 |
connective tissue cell | 6.77e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.14e-07 | 14 |