FF:11580-120F5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00004917 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008113;DRR008985;DRZ000410;DRZ001795;DRZ011760;DRZ013145 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000955,UBERON:0002037,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002680,UBERON:0002616,UBERON:0004733,UBERON:0004732,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001895,UBERON:0002028 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000095,CL:0000243,CL:0000128,CL:0000126,CL:0000125,CL:0000255,CL:0000127,CL:0002603 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000195 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000127;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002319;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002603;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001895;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002028;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002037 | |||
|ffid_belonging_in_development=CL:0000133,CL:0000339,CL:0000221 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11580-120F5 | |id=FF:11580-120F5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000195 | ||
|is_obsolete= | |||
|library_id=CNhs12081 | |||
|library_id_phase_based=2:CNhs12081 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11580 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11580 | |||
|name=Astrocyte - cerebellum, donor2 | |name=Astrocyte - cerebellum, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12081,LSID838,release011,COMPLETED | |profile_hcage=CNhs12081,LSID838,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10005,,, | |profile_srnaseq=SRhi10005,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.079691293826143,0,-0.0146050260203341,0.212588829069749,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193812582462541,0,0,0,0,0,0.607906997918052,0,0,0.0744090063813478,0,0,0,0,0,0,0,0,0,0,0.080626736260243,0,0.0672954870324843,0.26711712454233,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.259116505425895,0,0.139826222610375,0.148603081231402,-0.0163656249823621,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.073569484014848,0.148603081231402,0,0,0,-0.0133237024493551,0.188611318618608,0,0.347135592810969,0,0.080626736260243,-0.0980353512377064,0.0878763887996685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0560602257923395,0.080626736260243,0,0,-0.0342676336102362,-0.267678686272236,0,0,0.080626736260243,0,0,0 | |||
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| |||
|rna_box=120 | |rna_box=120 | ||
|rna_catalog_number=SC1815 | |rna_catalog_number=SC1815 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=lot:4862 | |sample_cell_catalog=lot:4862 | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.774011855103e-220!GO:0043226;organelle;7.06528441120609e-180!GO:0043229;intracellular organelle;1.08565276724361e-179!GO:0043231;intracellular membrane-bound organelle;4.82655923670405e-179!GO:0043227;membrane-bound organelle;9.87771496244698e-179!GO:0005737;cytoplasm;4.13633773476822e-177!GO:0044422;organelle part;3.72728649608237e-130!GO:0044446;intracellular organelle part;5.49228676962478e-129!GO:0044444;cytoplasmic part;6.22899507288814e-123!GO:0032991;macromolecular complex;3.91683051991837e-85!GO:0044237;cellular metabolic process;4.80553873365117e-75!GO:0044238;primary metabolic process;3.11131709661023e-74!GO:0030529;ribonucleoprotein complex;1.04541075378387e-73!GO:0005515;protein binding;1.98831539973395e-72!GO:0005634;nucleus;9.2339818424429e-69!GO:0043170;macromolecule metabolic process;2.06497971668182e-68!GO:0005739;mitochondrion;1.17862405183082e-67!GO:0043233;organelle lumen;7.59468485530951e-62!GO:0031974;membrane-enclosed lumen;7.59468485530951e-62!GO:0044428;nuclear part;1.3581481386523e-57!GO:0003723;RNA binding;5.67384876498905e-52!GO:0031090;organelle membrane;1.913567516246e-49!GO:0005840;ribosome;2.95745829950264e-49!GO:0016043;cellular component organization and biogenesis;4.43969656619139e-48!GO:0044429;mitochondrial part;1.40629453690289e-46!GO:0003735;structural constituent of ribosome;1.01091911423792e-44!GO:0043234;protein complex;2.85320386747664e-43!GO:0043283;biopolymer metabolic process;8.02252421932375e-41!GO:0019538;protein metabolic process;9.0719531714614e-41!GO:0006412;translation;1.8178419721178e-40!GO:0031967;organelle envelope;7.56266778901551e-40!GO:0031975;envelope;1.94214041569424e-39!GO:0033279;ribosomal subunit;1.42951949852935e-38!GO:0009058;biosynthetic process;1.7316104069843e-38!GO:0044260;cellular macromolecule metabolic process;1.58650977764861e-36!GO:0044267;cellular protein metabolic process;5.51451594638477e-36!GO:0031981;nuclear lumen;1.17571738207534e-35!GO:0044249;cellular biosynthetic process;1.22206300391839e-35!GO:0006996;organelle organization and biogenesis;1.60477977900567e-35!GO:0006396;RNA processing;1.73163341245985e-34!GO:0015031;protein transport;3.04565670224594e-34!GO:0009059;macromolecule biosynthetic process;3.54771174622384e-34!GO:0033036;macromolecule localization;1.45351961703564e-33!GO:0010467;gene expression;4.15334490506177e-33!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.05929186690972e-33!GO:0005740;mitochondrial envelope;5.90930917669116e-32!GO:0005829;cytosol;6.55714367614963e-32!GO:0008104;protein localization;2.42811670604186e-31!GO:0045184;establishment of protein localization;4.00445037099441e-31!GO:0043228;non-membrane-bound organelle;6.21783154035239e-31!GO:0043232;intracellular non-membrane-bound organelle;6.21783154035239e-31!GO:0031966;mitochondrial membrane;3.71065909335732e-30!GO:0019866;organelle inner membrane;1.50435919555661e-29!GO:0046907;intracellular transport;2.10845335712912e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.25355678246137e-28!GO:0006259;DNA metabolic process;3.8951190623147e-28!GO:0005743;mitochondrial inner membrane;5.97036318510717e-28!GO:0065003;macromolecular complex assembly;7.75702364596621e-28!GO:0016071;mRNA metabolic process;1.97464977087097e-27!GO:0008380;RNA splicing;1.15954336818092e-25!GO:0022607;cellular component assembly;2.82627390812719e-25!GO:0006886;intracellular protein transport;4.12554711040179e-24!GO:0007049;cell cycle;3.53179020019008e-23!GO:0006397;mRNA processing;7.44688386039298e-23!GO:0005654;nucleoplasm;6.29929736880935e-22!GO:0044445;cytosolic part;1.12774393559082e-21!GO:0015934;large ribosomal subunit;2.93913019552976e-21!GO:0044455;mitochondrial membrane part;1.12762217366059e-20!GO:0006119;oxidative phosphorylation;4.45531571431168e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.78043370559899e-19!GO:0044451;nucleoplasm part;1.06016366835393e-18!GO:0022402;cell cycle process;2.00187637254995e-18!GO:0015935;small ribosomal subunit;2.06871592943089e-18!GO:0012505;endomembrane system;3.09654823185089e-18!GO:0005681;spliceosome;4.55319651934678e-18!GO:0031980;mitochondrial lumen;5.21287238123758e-18!GO:0005759;mitochondrial matrix;5.21287238123758e-18!GO:0003676;nucleic acid binding;9.07898553965958e-18!GO:0051649;establishment of cellular localization;9.99265664625055e-18!GO:0051641;cellular localization;1.54520125090343e-17!GO:0000278;mitotic cell cycle;8.47686374794892e-17!GO:0005783;endoplasmic reticulum;2.30474521601675e-16!GO:0005746;mitochondrial respiratory chain;2.64697520691039e-16!GO:0000166;nucleotide binding;3.68026463143507e-16!GO:0048770;pigment granule;4.14202014864613e-16!GO:0042470;melanosome;4.14202014864613e-16!GO:0051276;chromosome organization and biogenesis;8.29935431509191e-16!GO:0008134;transcription factor binding;1.11252634119084e-15!GO:0006457;protein folding;1.73117951072349e-15!GO:0050136;NADH dehydrogenase (quinone) activity;2.02670701900926e-15!GO:0003954;NADH dehydrogenase activity;2.02670701900926e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.02670701900926e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.42132738766614e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;3.17289736324475e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.48251475018092e-15!GO:0005794;Golgi apparatus;7.08236861251416e-15!GO:0051186;cofactor metabolic process;8.41743219778362e-15!GO:0016462;pyrophosphatase activity;1.30892650910456e-14!GO:0006512;ubiquitin cycle;1.52524355145279e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.64034893212317e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.92032206346377e-14!GO:0016874;ligase activity;1.9879085686876e-14!GO:0044432;endoplasmic reticulum part;2.41888155290711e-14!GO:0006323;DNA packaging;2.65678987023876e-14!GO:0017111;nucleoside-triphosphatase activity;5.52334675487562e-14!GO:0043412;biopolymer modification;7.36386689910136e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.5897228601733e-13!GO:0042773;ATP synthesis coupled electron transport;1.5897228601733e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.85695715244106e-13!GO:0005730;nucleolus;2.08610358559387e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.43501594443193e-13!GO:0045271;respiratory chain complex I;2.43501594443193e-13!GO:0005747;mitochondrial respiratory chain complex I;2.43501594443193e-13!GO:0005694;chromosome;2.4784382858205e-13!GO:0016070;RNA metabolic process;3.04510908009136e-13!GO:0005761;mitochondrial ribosome;3.43924846777029e-13!GO:0000313;organellar ribosome;3.43924846777029e-13!GO:0044427;chromosomal part;5.85097893264299e-13!GO:0044265;cellular macromolecule catabolic process;7.87995502886495e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.11513875105327e-13!GO:0022403;cell cycle phase;9.48094581177269e-13!GO:0006605;protein targeting;1.05560793791697e-12!GO:0006464;protein modification process;1.13398721704109e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.13104408427336e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;3.33810851617638e-12!GO:0000502;proteasome complex (sensu Eukaryota);3.76324652943315e-12!GO:0019941;modification-dependent protein catabolic process;4.24169075687122e-12!GO:0043632;modification-dependent macromolecule catabolic process;4.24169075687122e-12!GO:0006511;ubiquitin-dependent protein catabolic process;6.41593925319422e-12!GO:0044257;cellular protein catabolic process;6.79429960045286e-12!GO:0043285;biopolymer catabolic process;9.13435292986476e-12!GO:0006974;response to DNA damage stimulus;9.42593293908129e-12!GO:0009057;macromolecule catabolic process;3.42583285748659e-11!GO:0051726;regulation of cell cycle;3.68833924310657e-11!GO:0006732;coenzyme metabolic process;3.69430983859436e-11!GO:0051082;unfolded protein binding;4.38319310413115e-11!GO:0048193;Golgi vesicle transport;4.8545775440335e-11!GO:0032553;ribonucleotide binding;5.93444792425119e-11!GO:0032555;purine ribonucleotide binding;5.93444792425119e-11!GO:0007067;mitosis;5.95326821849762e-11!GO:0000074;regulation of progression through cell cycle;6.38083066729762e-11!GO:0000087;M phase of mitotic cell cycle;6.44328654706491e-11!GO:0044248;cellular catabolic process;7.82284328503016e-11!GO:0022618;protein-RNA complex assembly;8.01149904746224e-11!GO:0006333;chromatin assembly or disassembly;1.12057469364682e-10!GO:0030163;protein catabolic process;1.32496344463773e-10!GO:0017076;purine nucleotide binding;1.34367055487647e-10!GO:0065004;protein-DNA complex assembly;1.55186345598413e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;1.64381318473846e-10!GO:0000375;RNA splicing, via transesterification reactions;1.64381318473846e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.64381318473846e-10!GO:0043687;post-translational protein modification;1.82766979784781e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.95050621800488e-10!GO:0005789;endoplasmic reticulum membrane;2.43219869028657e-10!GO:0003712;transcription cofactor activity;3.69124144279081e-10!GO:0009055;electron carrier activity;3.94527853287065e-10!GO:0006260;DNA replication;4.49746812158975e-10!GO:0000785;chromatin;5.2124252652635e-10!GO:0005793;ER-Golgi intermediate compartment;6.43975466189314e-10!GO:0051301;cell division;7.51836930672735e-10!GO:0006281;DNA repair;7.70715508427154e-10!GO:0016192;vesicle-mediated transport;1.05324112596266e-09!GO:0006334;nucleosome assembly;1.06982963047889e-09!GO:0031497;chromatin assembly;1.58924431659123e-09!GO:0005524;ATP binding;2.35621833223734e-09!GO:0008135;translation factor activity, nucleic acid binding;2.66611107820171e-09!GO:0005635;nuclear envelope;2.89428285942359e-09!GO:0032559;adenyl ribonucleotide binding;3.93577192087863e-09!GO:0048523;negative regulation of cellular process;4.36286341570209e-09!GO:0031965;nuclear membrane;4.8502655023044e-09!GO:0050794;regulation of cellular process;7.22787191954134e-09!GO:0000279;M phase;9.16823419690465e-09!GO:0006366;transcription from RNA polymerase II promoter;9.4474690297817e-09!GO:0030554;adenyl nucleotide binding;1.16447880952774e-08!GO:0042254;ribosome biogenesis and assembly;1.44729229969734e-08!GO:0012501;programmed cell death;1.5241522786627e-08!GO:0009719;response to endogenous stimulus;1.65691138834215e-08!GO:0006913;nucleocytoplasmic transport;2.08233419178223e-08!GO:0006461;protein complex assembly;2.13019270469563e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.57113479785793e-08!GO:0006915;apoptosis;3.62288863580146e-08!GO:0051169;nuclear transport;4.24620144441212e-08!GO:0044453;nuclear membrane part;4.41325297852356e-08!GO:0008639;small protein conjugating enzyme activity;4.80676458623563e-08!GO:0051188;cofactor biosynthetic process;5.94707743484106e-08!GO:0016604;nuclear body;6.22094029124457e-08!GO:0006399;tRNA metabolic process;6.47078268451873e-08!GO:0016740;transferase activity;7.00660747216047e-08!GO:0008565;protein transporter activity;7.6218846305008e-08!GO:0009259;ribonucleotide metabolic process;7.94609045856863e-08!GO:0007005;mitochondrion organization and biogenesis;7.94609045856863e-08!GO:0016568;chromatin modification;8.69227001225182e-08!GO:0004842;ubiquitin-protein ligase activity;9.08246318938765e-08!GO:0006163;purine nucleotide metabolic process;9.16790362786479e-08!GO:0017038;protein import;9.41484312145507e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.60588664147264e-08!GO:0009150;purine ribonucleotide metabolic process;1.23741049379872e-07!GO:0008219;cell death;1.70885424353938e-07!GO:0016265;death;1.70885424353938e-07!GO:0048519;negative regulation of biological process;2.02659449659254e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.12160584739759e-07!GO:0015630;microtubule cytoskeleton;2.26399149260903e-07!GO:0019787;small conjugating protein ligase activity;2.48963726398345e-07!GO:0051329;interphase of mitotic cell cycle;3.11315648221891e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.95956333994151e-07!GO:0065002;intracellular protein transport across a membrane;3.9670040164337e-07!GO:0009060;aerobic respiration;4.24028763563783e-07!GO:0006164;purine nucleotide biosynthetic process;5.49778561896609e-07!GO:0044431;Golgi apparatus part;6.42318924710788e-07!GO:0009141;nucleoside triphosphate metabolic process;6.53669379396959e-07!GO:0051325;interphase;6.98340893941592e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.15090479399424e-07!GO:0030120;vesicle coat;7.31390066018987e-07!GO:0030662;coated vesicle membrane;7.31390066018987e-07!GO:0009152;purine ribonucleotide biosynthetic process;7.37238318719582e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.53250632143495e-07!GO:0005667;transcription factor complex;7.53250632143495e-07!GO:0009260;ribonucleotide biosynthetic process;8.67318330157965e-07!GO:0003743;translation initiation factor activity;8.91906926145095e-07!GO:0042623;ATPase activity, coupled;9.21269381509466e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.0026979991016e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.0026979991016e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.0026979991016e-06!GO:0045786;negative regulation of progression through cell cycle;1.02140576882544e-06!GO:0050789;regulation of biological process;1.08075345983946e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.20674583322841e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.20674583322841e-06!GO:0005768;endosome;1.37333726071411e-06!GO:0045333;cellular respiration;1.47272918094806e-06!GO:0005643;nuclear pore;1.51470445840315e-06!GO:0016881;acid-amino acid ligase activity;1.90698653198012e-06!GO:0006446;regulation of translational initiation;1.90698653198012e-06!GO:0015986;ATP synthesis coupled proton transport;1.91744137237552e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.91744137237552e-06!GO:0016049;cell growth;2.00221394921551e-06!GO:0003924;GTPase activity;2.03756829313729e-06!GO:0008361;regulation of cell size;2.37619208636355e-06!GO:0016887;ATPase activity;2.37619208636355e-06!GO:0045259;proton-transporting ATP synthase complex;2.55791717942095e-06!GO:0006413;translational initiation;2.62516816325437e-06!GO:0031324;negative regulation of cellular metabolic process;2.65809676040691e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.05132285593167e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.05132285593167e-06!GO:0043038;amino acid activation;3.36974829922862e-06!GO:0006418;tRNA aminoacylation for protein translation;3.36974829922862e-06!GO:0043039;tRNA aminoacylation;3.36974829922862e-06!GO:0048475;coated membrane;3.69930941048389e-06!GO:0030117;membrane coat;3.69930941048389e-06!GO:0006793;phosphorus metabolic process;3.83739050767271e-06!GO:0006796;phosphate metabolic process;3.83739050767271e-06!GO:0006364;rRNA processing;4.19770015601586e-06!GO:0016607;nuclear speck;4.2550702696706e-06!GO:0005762;mitochondrial large ribosomal subunit;4.84861737837234e-06!GO:0000315;organellar large ribosomal subunit;4.84861737837234e-06!GO:0031252;leading edge;5.13782819791182e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.17104051316899e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.17104051316899e-06!GO:0005839;proteasome core complex (sensu Eukaryota);5.61570839145576e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.94501718878374e-06!GO:0046034;ATP metabolic process;6.08456724818644e-06!GO:0009056;catabolic process;6.16289822127575e-06!GO:0005788;endoplasmic reticulum lumen;6.85046177638113e-06!GO:0009117;nucleotide metabolic process;8.03718980205207e-06!GO:0015078;hydrogen ion transmembrane transporter activity;8.28105281930472e-06!GO:0006099;tricarboxylic acid cycle;8.75971925317607e-06!GO:0046356;acetyl-CoA catabolic process;8.75971925317607e-06!GO:0003697;single-stranded DNA binding;1.0768260022637e-05!GO:0016072;rRNA metabolic process;1.1675232840587e-05!GO:0001558;regulation of cell growth;1.18220120562911e-05!GO:0019829;cation-transporting ATPase activity;1.21082969679034e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.24862034053504e-05!GO:0009108;coenzyme biosynthetic process;1.25477312518721e-05!GO:0043067;regulation of programmed cell death;1.40205524463759e-05!GO:0016564;transcription repressor activity;1.43503722214358e-05!GO:0046930;pore complex;1.48490538441208e-05!GO:0016853;isomerase activity;1.60588490789642e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.61464595284758e-05!GO:0042981;regulation of apoptosis;1.64186939744563e-05!GO:0003714;transcription corepressor activity;1.81735117816318e-05!GO:0006084;acetyl-CoA metabolic process;1.91928281553621e-05!GO:0016779;nucleotidyltransferase activity;1.9287161593164e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.9791673882554e-05!GO:0008654;phospholipid biosynthetic process;2.01467378998088e-05!GO:0016491;oxidoreductase activity;2.05900057025866e-05!GO:0043623;cellular protein complex assembly;2.07030563059816e-05!GO:0000139;Golgi membrane;2.20003347356931e-05!GO:0005905;coated pit;2.24803480632081e-05!GO:0006754;ATP biosynthetic process;2.42738837166541e-05!GO:0006753;nucleoside phosphate metabolic process;2.42738837166541e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.92215662065741e-05!GO:0032446;protein modification by small protein conjugation;3.01279068731198e-05!GO:0016563;transcription activator activity;3.2305389035979e-05!GO:0016310;phosphorylation;3.24537126808218e-05!GO:0000786;nucleosome;3.26451212142487e-05!GO:0009892;negative regulation of metabolic process;3.28961113505269e-05!GO:0044440;endosomal part;3.71748718434396e-05!GO:0010008;endosome membrane;3.71748718434396e-05!GO:0007010;cytoskeleton organization and biogenesis;4.00940507727352e-05!GO:0003713;transcription coactivator activity;4.12281288530258e-05!GO:0016481;negative regulation of transcription;4.23370040780005e-05!GO:0004298;threonine endopeptidase activity;4.3632306821783e-05!GO:0009109;coenzyme catabolic process;4.39728742323279e-05!GO:0016567;protein ubiquitination;4.48452641686215e-05!GO:0019899;enzyme binding;4.58840904391776e-05!GO:0051427;hormone receptor binding;4.61490032495799e-05!GO:0003899;DNA-directed RNA polymerase activity;4.68472918779506e-05!GO:0016023;cytoplasmic membrane-bound vesicle;4.9613830657354e-05!GO:0004386;helicase activity;5.5629614606667e-05!GO:0000151;ubiquitin ligase complex;5.82245086166004e-05!GO:0006916;anti-apoptosis;5.82245086166004e-05!GO:0043566;structure-specific DNA binding;5.88782036482727e-05!GO:0000245;spliceosome assembly;6.50234478411565e-05!GO:0031988;membrane-bound vesicle;6.68666274722889e-05!GO:0006752;group transfer coenzyme metabolic process;6.73041034656846e-05!GO:0051187;cofactor catabolic process;6.76328769742501e-05!GO:0006606;protein import into nucleus;6.94890220068897e-05!GO:0051170;nuclear import;7.76296184417505e-05!GO:0035257;nuclear hormone receptor binding;9.41966663972848e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.45779606475438e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000104929263250075!GO:0008026;ATP-dependent helicase activity;0.000113720863640642!GO:0043069;negative regulation of programmed cell death;0.000133727723031092!GO:0006403;RNA localization;0.000160732668324591!GO:0030867;rough endoplasmic reticulum membrane;0.000163506555660512!GO:0051246;regulation of protein metabolic process;0.000163834023234342!GO:0050657;nucleic acid transport;0.000171034564330452!GO:0051236;establishment of RNA localization;0.000171034564330452!GO:0050658;RNA transport;0.000171034564330452!GO:0015980;energy derivation by oxidation of organic compounds;0.000174086969507824!GO:0005819;spindle;0.000189034584809239!GO:0045454;cell redox homeostasis;0.000192579239630259!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000193007163789561!GO:0030036;actin cytoskeleton organization and biogenesis;0.000193165710250232!GO:0043066;negative regulation of apoptosis;0.00021433962804869!GO:0033116;ER-Golgi intermediate compartment membrane;0.000223112416369608!GO:0005770;late endosome;0.000223942814060766!GO:0040008;regulation of growth;0.000256188733516829!GO:0016859;cis-trans isomerase activity;0.000284649509286527!GO:0005798;Golgi-associated vesicle;0.00029778700339184!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000303102498329032!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000352124299921072!GO:0005813;centrosome;0.00035667222464459!GO:0030133;transport vesicle;0.000364141756606536!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000369218357775626!GO:0031982;vesicle;0.000394756291124316!GO:0031410;cytoplasmic vesicle;0.000425014672085574!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000449869387573149!GO:0000314;organellar small ribosomal subunit;0.000454856049789934!GO:0005763;mitochondrial small ribosomal subunit;0.000454856049789934!GO:0005773;vacuole;0.000513020120245945!GO:0005791;rough endoplasmic reticulum;0.000515115400092374!GO:0046474;glycerophospholipid biosynthetic process;0.000521276215975667!GO:0030176;integral to endoplasmic reticulum membrane;0.000534200059454471!GO:0006091;generation of precursor metabolites and energy;0.00058068939627086!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000654832822577981!GO:0005815;microtubule organizing center;0.000654985623318994!GO:0005525;GTP binding;0.000678970888075318!GO:0005769;early endosome;0.00068605750959185!GO:0044262;cellular carbohydrate metabolic process;0.000686132878684674!GO:0048522;positive regulation of cellular process;0.000717114129843948!GO:0006839;mitochondrial transport;0.000826501828229662!GO:0006626;protein targeting to mitochondrion;0.000841961765885735!GO:0005874;microtubule;0.000852455589588799!GO:0030132;clathrin coat of coated pit;0.00085612910719928!GO:0008250;oligosaccharyl transferase complex;0.000874894929910712!GO:0030029;actin filament-based process;0.000880004980341875!GO:0007006;mitochondrial membrane organization and biogenesis;0.000910361814348103!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000930046991655366!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000957467428784629!GO:0043681;protein import into mitochondrion;0.000961293314693741!GO:0008092;cytoskeletal protein binding;0.000962561146070782!GO:0005048;signal sequence binding;0.000998571157433848!GO:0019843;rRNA binding;0.00108349800884621!GO:0046467;membrane lipid biosynthetic process;0.00118843207437033!GO:0006613;cotranslational protein targeting to membrane;0.00124690851362788!GO:0031968;organelle outer membrane;0.00129021982396051!GO:0019867;outer membrane;0.00137863894207836!GO:0006414;translational elongation;0.00139625228477032!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00143245596007766!GO:0006261;DNA-dependent DNA replication;0.0014348145464695!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00146372164511459!GO:0007264;small GTPase mediated signal transduction;0.00146372164511459!GO:0008610;lipid biosynthetic process;0.00151820868248721!GO:0003684;damaged DNA binding;0.00153261684502006!GO:0051789;response to protein stimulus;0.00160447612714138!GO:0006986;response to unfolded protein;0.00160447612714138!GO:0051028;mRNA transport;0.00166183909208398!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00167464664914102!GO:0051920;peroxiredoxin activity;0.00171173261124195!GO:0005741;mitochondrial outer membrane;0.00178084931710497!GO:0016126;sterol biosynthetic process;0.00182932246224315!GO:0048471;perinuclear region of cytoplasm;0.00186918787939084!GO:0016787;hydrolase activity;0.0019129261661996!GO:0045892;negative regulation of transcription, DNA-dependent;0.00196971418715074!GO:0030118;clathrin coat;0.00198247219491274!GO:0005885;Arp2/3 protein complex;0.00210547775044075!GO:0018196;peptidyl-asparagine modification;0.00226858667041464!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00226858667041464!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00228425615637378!GO:0008286;insulin receptor signaling pathway;0.0023133078845912!GO:0007243;protein kinase cascade;0.00239631051208631!GO:0019222;regulation of metabolic process;0.00242228980718779!GO:0065009;regulation of a molecular function;0.0024516246402159!GO:0030027;lamellipodium;0.00254035440907339!GO:0042802;identical protein binding;0.00254334923622195!GO:0016044;membrane organization and biogenesis;0.00257953640041836!GO:0008094;DNA-dependent ATPase activity;0.0025925046445503!GO:0000075;cell cycle checkpoint;0.00259532330252536!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00262044695374556!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00262044695374556!GO:0000323;lytic vacuole;0.00300683400135531!GO:0005764;lysosome;0.00300683400135531!GO:0065007;biological regulation;0.0030275802030086!GO:0032561;guanyl ribonucleotide binding;0.00310325746865677!GO:0019001;guanyl nucleotide binding;0.00310325746865677!GO:0004576;oligosaccharyl transferase activity;0.00312780914212866!GO:0046489;phosphoinositide biosynthetic process;0.0031526303584549!GO:0043284;biopolymer biosynthetic process;0.00317640494063848!GO:0007051;spindle organization and biogenesis;0.00340004417392589!GO:0045941;positive regulation of transcription;0.00341315267505691!GO:0007050;cell cycle arrest;0.00341315267505691!GO:0005684;U2-dependent spliceosome;0.00345346318304796!GO:0001726;ruffle;0.00348443380080133!GO:0043488;regulation of mRNA stability;0.00350345149746348!GO:0043487;regulation of RNA stability;0.00350345149746348!GO:0007346;regulation of progression through mitotic cell cycle;0.00355396538051723!GO:0000902;cell morphogenesis;0.00359771987207256!GO:0032989;cellular structure morphogenesis;0.00359771987207256!GO:0030880;RNA polymerase complex;0.00366576611324862!GO:0043021;ribonucleoprotein binding;0.00371071146601804!GO:0005657;replication fork;0.00379178242522355!GO:0017166;vinculin binding;0.00386202285662974!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00395499920953892!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00395499920953892!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00395499920953892!GO:0006740;NADPH regeneration;0.00413049307984683!GO:0006098;pentose-phosphate shunt;0.00413049307984683!GO:0009165;nucleotide biosynthetic process;0.00414868893984707!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00443914191803755!GO:0006595;polyamine metabolic process;0.00453420356356975!GO:0045893;positive regulation of transcription, DNA-dependent;0.00457803951423166!GO:0016363;nuclear matrix;0.004643806852167!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00466738714643146!GO:0035258;steroid hormone receptor binding;0.00468892773223036!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00476229388354976!GO:0000775;chromosome, pericentric region;0.00476788791879769!GO:0008033;tRNA processing;0.0048329344937402!GO:0000082;G1/S transition of mitotic cell cycle;0.00483377532982401!GO:0006779;porphyrin biosynthetic process;0.00484545720899164!GO:0033014;tetrapyrrole biosynthetic process;0.00484545720899164!GO:0031072;heat shock protein binding;0.00499522998472777!GO:0030658;transport vesicle membrane;0.00507984006459649!GO:0003682;chromatin binding;0.00510691905502655!GO:0048468;cell development;0.00560240437941258!GO:0051168;nuclear export;0.00561135097365421!GO:0006402;mRNA catabolic process;0.00565475215449825!GO:0003724;RNA helicase activity;0.00579271837329697!GO:0006695;cholesterol biosynthetic process;0.00594473767740424!GO:0051101;regulation of DNA binding;0.00627685168749648!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00639538494101603!GO:0015399;primary active transmembrane transporter activity;0.00639538494101603!GO:0006778;porphyrin metabolic process;0.00650347834304431!GO:0033013;tetrapyrrole metabolic process;0.00650347834304431!GO:0030119;AP-type membrane coat adaptor complex;0.00682728537918883!GO:0051252;regulation of RNA metabolic process;0.00707185927594725!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00707185927594725!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00715465733461063!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00742786976436344!GO:0040029;regulation of gene expression, epigenetic;0.00743717528793043!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00747812527064029!GO:0003678;DNA helicase activity;0.00806165472417264!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00837535290457026!GO:0000428;DNA-directed RNA polymerase complex;0.00837535290457026!GO:0016569;covalent chromatin modification;0.00845782522371854!GO:0008168;methyltransferase activity;0.00872951466332546!GO:0031902;late endosome membrane;0.00880849177100465!GO:0016741;transferase activity, transferring one-carbon groups;0.00894719097722216!GO:0000084;S phase of mitotic cell cycle;0.00912374237157465!GO:0048487;beta-tubulin binding;0.00928697616117529!GO:0032508;DNA duplex unwinding;0.00947153278419642!GO:0032392;DNA geometric change;0.00947153278419642!GO:0030663;COPI coated vesicle membrane;0.00947526157717664!GO:0030126;COPI vesicle coat;0.00947526157717664!GO:0030131;clathrin adaptor complex;0.00961874153013992!GO:0030125;clathrin vesicle coat;0.00984459659235044!GO:0030665;clathrin coated vesicle membrane;0.00984459659235044!GO:0006509;membrane protein ectodomain proteolysis;0.0102428129592379!GO:0033619;membrane protein proteolysis;0.0102428129592379!GO:0016197;endosome transport;0.0102684725247299!GO:0033673;negative regulation of kinase activity;0.0104411187483804!GO:0006469;negative regulation of protein kinase activity;0.0104411187483804!GO:0007265;Ras protein signal transduction;0.0104411187483804!GO:0003729;mRNA binding;0.0104411187483804!GO:0000059;protein import into nucleus, docking;0.0104709648806429!GO:0031301;integral to organelle membrane;0.0106085990210031!GO:0030308;negative regulation of cell growth;0.0108997241970137!GO:0016272;prefoldin complex;0.0108997241970137!GO:0006979;response to oxidative stress;0.0109194288264825!GO:0051348;negative regulation of transferase activity;0.0111866821183883!GO:0000118;histone deacetylase complex;0.0113652447977397!GO:0006383;transcription from RNA polymerase III promoter;0.011425394969833!GO:0045792;negative regulation of cell size;0.0115034572393107!GO:0030134;ER to Golgi transport vesicle;0.0115034572393107!GO:0008139;nuclear localization sequence binding;0.0115603888797846!GO:0042158;lipoprotein biosynthetic process;0.0121927156056275!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0124972628864487!GO:0045936;negative regulation of phosphate metabolic process;0.0125571171908431!GO:0030521;androgen receptor signaling pathway;0.0130782006255442!GO:0004674;protein serine/threonine kinase activity;0.0132439039089862!GO:0030137;COPI-coated vesicle;0.0132913634804277!GO:0006783;heme biosynthetic process;0.0137831944294323!GO:0006497;protein amino acid lipidation;0.0139457457462179!GO:0030660;Golgi-associated vesicle membrane;0.0139905675987115!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0139905675987115!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0140779394816099!GO:0015002;heme-copper terminal oxidase activity;0.0140779394816099!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0140779394816099!GO:0004129;cytochrome-c oxidase activity;0.0140779394816099!GO:0015631;tubulin binding;0.0141727112100444!GO:0051098;regulation of binding;0.0143251549971882!GO:0006520;amino acid metabolic process;0.0145534402728994!GO:0008047;enzyme activator activity;0.0146458174926763!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0148736913079838!GO:0005862;muscle thin filament tropomyosin;0.0154301139808975!GO:0006891;intra-Golgi vesicle-mediated transport;0.0157782992866064!GO:0006289;nucleotide-excision repair;0.0161268070723278!GO:0030659;cytoplasmic vesicle membrane;0.0161833506658302!GO:0005637;nuclear inner membrane;0.0163915637345126!GO:0006268;DNA unwinding during replication;0.0164095795432608!GO:0016570;histone modification;0.0164901821793088!GO:0005869;dynactin complex;0.0166428533324813!GO:0044452;nucleolar part;0.0166874708013982!GO:0000792;heterochromatin;0.0169027272871012!GO:0007040;lysosome organization and biogenesis;0.0174466841421246!GO:0006284;base-excision repair;0.0177325930241933!GO:0046870;cadmium ion binding;0.0177611611440381!GO:0042168;heme metabolic process;0.0179211420580085!GO:0006612;protein targeting to membrane;0.0184399996510726!GO:0008632;apoptotic program;0.0184452746239472!GO:0030127;COPII vesicle coat;0.0187021782385713!GO:0012507;ER to Golgi transport vesicle membrane;0.0187021782385713!GO:0046519;sphingoid metabolic process;0.0191291371942176!GO:0006220;pyrimidine nucleotide metabolic process;0.0193282253767065!GO:0008637;apoptotic mitochondrial changes;0.0202859564053719!GO:0003711;transcription elongation regulator activity;0.0202859564053719!GO:0006650;glycerophospholipid metabolic process;0.0205632439090417!GO:0045334;clathrin-coated endocytic vesicle;0.0209296092466782!GO:0048518;positive regulation of biological process;0.0210020905256185!GO:0043414;biopolymer methylation;0.0210020905256185!GO:0003746;translation elongation factor activity;0.0215472525302762!GO:0030041;actin filament polymerization;0.0215758760255357!GO:0006082;organic acid metabolic process;0.0217633990181488!GO:0046483;heterocycle metabolic process;0.0217732186287458!GO:0051287;NAD binding;0.0217996293936837!GO:0007088;regulation of mitosis;0.0221006525697094!GO:0006506;GPI anchor biosynthetic process;0.0221021579771709!GO:0046426;negative regulation of JAK-STAT cascade;0.0222283395607821!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0223708244366081!GO:0008186;RNA-dependent ATPase activity;0.0228949834974299!GO:0006338;chromatin remodeling;0.0236721546357162!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0236721546357162!GO:0010257;NADH dehydrogenase complex assembly;0.0236721546357162!GO:0033108;mitochondrial respiratory chain complex assembly;0.0236721546357162!GO:0019752;carboxylic acid metabolic process;0.0240846817916049!GO:0019206;nucleoside kinase activity;0.0243164697112874!GO:0007033;vacuole organization and biogenesis;0.0246758397760771!GO:0045926;negative regulation of growth;0.0252097652148164!GO:0000910;cytokinesis;0.0252417927375627!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.025247450008527!GO:0008629;induction of apoptosis by intracellular signals;0.025247450008527!GO:0016860;intramolecular oxidoreductase activity;0.0254666724237578!GO:0016311;dephosphorylation;0.0258785637416441!GO:0051087;chaperone binding;0.0259084240534969!GO:0016301;kinase activity;0.0260152157445235!GO:0051539;4 iron, 4 sulfur cluster binding;0.0260948133830223!GO:0031529;ruffle organization and biogenesis;0.0261342564403331!GO:0006611;protein export from nucleus;0.0265692245985317!GO:0015992;proton transport;0.0269134705639368!GO:0050790;regulation of catalytic activity;0.0270180834808217!GO:0006818;hydrogen transport;0.0274573496087531!GO:0008287;protein serine/threonine phosphatase complex;0.0275243960111448!GO:0000123;histone acetyltransferase complex;0.027570217634956!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0277502737020993!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0279516816741987!GO:0006739;NADP metabolic process;0.0279516816741987!GO:0030128;clathrin coat of endocytic vesicle;0.0284655203713416!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0284655203713416!GO:0030122;AP-2 adaptor complex;0.0284655203713416!GO:0006352;transcription initiation;0.0286791215109533!GO:0005774;vacuolar membrane;0.0286791215109533!GO:0033559;unsaturated fatty acid metabolic process;0.0286791215109533!GO:0006636;unsaturated fatty acid biosynthetic process;0.0286791215109533!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0289012109723268!GO:0006505;GPI anchor metabolic process;0.0293006654618098!GO:0004860;protein kinase inhibitor activity;0.0305275605916163!GO:0008538;proteasome activator activity;0.0306780775795844!GO:0042326;negative regulation of phosphorylation;0.0312619686256545!GO:0008213;protein amino acid alkylation;0.0315399756125312!GO:0006479;protein amino acid methylation;0.0315399756125312!GO:0008652;amino acid biosynthetic process;0.0315519654859779!GO:0006672;ceramide metabolic process;0.0317352855687425!GO:0006401;RNA catabolic process;0.0318903085168572!GO:0031124;mRNA 3'-end processing;0.0322169002354809!GO:0000049;tRNA binding;0.0323525912224335!GO:0004003;ATP-dependent DNA helicase activity;0.0323683753871528!GO:0044433;cytoplasmic vesicle part;0.0330293677563329!GO:0004177;aminopeptidase activity;0.0332495635871462!GO:0005096;GTPase activator activity;0.0345811430563235!GO:0009303;rRNA transcription;0.0346136934366858!GO:0030031;cell projection biogenesis;0.0349489310937693!GO:0009966;regulation of signal transduction;0.0356887158251044!GO:0030433;ER-associated protein catabolic process;0.0356934102593686!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0356934102593686!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0358383369589714!GO:0046822;regulation of nucleocytoplasmic transport;0.0360181877835649!GO:0030032;lamellipodium biogenesis;0.0361934385122864!GO:0050178;phenylpyruvate tautomerase activity;0.0361934385122864!GO:0006350;transcription;0.0363562661141869!GO:0030145;manganese ion binding;0.0365051581099424!GO:0005100;Rho GTPase activator activity;0.03690462538003!GO:0022890;inorganic cation transmembrane transporter activity;0.03690462538003!GO:0032259;methylation;0.0369899230784548!GO:0050662;coenzyme binding;0.0371901027046675!GO:0030508;thiol-disulfide exchange intermediate activity;0.0374054428321562!GO:0043189;H4/H2A histone acetyltransferase complex;0.0374320479620752!GO:0006790;sulfur metabolic process;0.0374320479620752!GO:0007021;tubulin folding;0.0378459962333724!GO:0051128;regulation of cellular component organization and biogenesis;0.0382014210231532!GO:0031323;regulation of cellular metabolic process;0.0383092367596557!GO:0030384;phosphoinositide metabolic process;0.0391551504503369!GO:0005996;monosaccharide metabolic process;0.0391551504503369!GO:0006007;glucose catabolic process;0.0391551504503369!GO:0051540;metal cluster binding;0.0393406918050235!GO:0051536;iron-sulfur cluster binding;0.0393406918050235!GO:0000086;G2/M transition of mitotic cell cycle;0.0393406918050235!GO:0019318;hexose metabolic process;0.0400957883999702!GO:0003690;double-stranded DNA binding;0.0402122138513125!GO:0031901;early endosome membrane;0.040376017062765!GO:0003756;protein disulfide isomerase activity;0.040376017062765!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.040376017062765!GO:0032906;transforming growth factor-beta2 production;0.040376017062765!GO:0032909;regulation of transforming growth factor-beta2 production;0.040376017062765!GO:0035267;NuA4 histone acetyltransferase complex;0.0405093946403624!GO:0008022;protein C-terminus binding;0.041721779803392!GO:0051338;regulation of transferase activity;0.0420160049929328!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0426310375432976!GO:0043433;negative regulation of transcription factor activity;0.0434960301290674!GO:0000096;sulfur amino acid metabolic process;0.0435720706725874!GO:0051320;S phase;0.0436639517264264!GO:0008320;protein transmembrane transporter activity;0.0443817764522495!GO:0030518;steroid hormone receptor signaling pathway;0.0444060383902132!GO:0022884;macromolecule transmembrane transporter activity;0.0444979294737101!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0444979294737101!GO:0051059;NF-kappaB binding;0.0445819173518493!GO:0007017;microtubule-based process;0.0448387190835742!GO:0009081;branched chain family amino acid metabolic process;0.0458492121277271!GO:0030911;TPR domain binding;0.0458492121277271!GO:0048500;signal recognition particle;0.0459508201874748!GO:0043492;ATPase activity, coupled to movement of substances;0.0459508201874748!GO:0018193;peptidyl-amino acid modification;0.0460442946466824!GO:0006458;'de novo' protein folding;0.0464386437830243!GO:0051084;'de novo' posttranslational protein folding;0.0464386437830243!GO:0006733;oxidoreduction coenzyme metabolic process;0.0474751416105249!GO:0004004;ATP-dependent RNA helicase activity;0.0474751416105249!GO:0016584;nucleosome positioning;0.0474751416105249!GO:0004364;glutathione transferase activity;0.0474967525493814!GO:0006643;membrane lipid metabolic process;0.0484445835828265!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0490813490325898!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0491298770788658!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0493353085945395!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0497681009979619 | |||
|sample_id=11580 | |sample_id=11580 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=cerebellum | |sample_tissue=cerebellum | ||
|top_motifs=ZIC1..3:1.86297544115;EBF1:1.80159451945;GTF2A1,2:1.6725788926;TFAP2{A,C}:1.64571854176;XCPE1{core}:1.51902160459;GZF1:1.3728093475;RXR{A,B,G}:1.26638888065;PBX1:1.23914219453;ZNF423:1.13429881838;TFAP4:1.0854478286;TFAP2B:1.08092906378;SP1:1.0452340403;GFI1:1.03898768192;ESR1:0.957396061101;ESRRA:0.915262927967;SOX{8,9,10}:0.910221939894;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.881708671774;ZNF148:0.881384119756;MZF1:0.855997514171;PAX1,9:0.84716680372;TEAD1:0.844689322218;RXRA_VDR{dimer}:0.83820766095;LEF1_TCF7_TCF7L1,2:0.835964780369;TLX1..3_NFIC{dimer}:0.803200449351;MTF1:0.797909941234;SPZ1:0.76168256711;POU2F1..3:0.712435231569;TFCP2:0.71198338702;RREB1:0.711510074663;NR6A1:0.691507779612;ZBTB6:0.684084269195;TAL1_TCF{3,4,12}:0.641022091794;HIC1:0.640057834274;LHX3,4:0.639130050119;GTF2I:0.614634891175;NR5A1,2:0.61451682199;PATZ1:0.592689471682;HES1:0.588301588258;NFY{A,B,C}:0.57970383367;E2F1..5:0.566237656946;TFDP1:0.561383023293;HMX1:0.547439879994;PAX5:0.547213050511;HOX{A5,B5}:0.541099992012;TP53:0.508526286497;MTE{core}:0.497702992561;MAZ:0.478320708491;KLF4:0.463895837972;SMAD1..7,9:0.45108939148;HNF4A_NR2F1,2:0.435427054837;GLI1..3:0.415625019226;NR3C1:0.406968704495;PPARG:0.385092800994;SRF:0.373323500315;POU5F1:0.365711183907;NKX2-3_NKX2-5:0.353641186414;SOX17:0.351385042419;ZNF143:0.348471820079;ONECUT1,2:0.337119935512;IKZF1:0.307117421398;bHLH_family:0.301336163962;UFEwm:0.298129691477;GFI1B:0.285133930374;TOPORS:0.281184520644;BREu{core}:0.278946275296;NHLH1,2:0.258862715182;NFE2L1:0.243338039739;EN1,2:0.224059796556;TBX4,5:0.220199027598;YY1:0.220056266371;TBP:0.21873974165;REST:0.209921965221;NR1H4:0.209574804663;MED-1{core}:0.190085271271;AR:0.188715493672;GCM1,2:0.185829108205;ZNF238:0.178568430977;ZFP161:0.152478887468;NKX2-2,8:0.144140252938;EGR1..3:0.137759645757;NFE2L2:0.117288969708;SOX2:0.10270291127;NFIX:0.0802531701907;NANOG:0.0609756125862;XBP1:0.0599185888989;BACH2:0.0359036285295;FOS_FOS{B,L1}_JUN{B,D}:0.0292315156519;OCT4_SOX2{dimer}:0.029046788739;SOX5:0.0240218548129;FOXL1:0.0142700113411;ZNF384:0.0134618512308;MEF2{A,B,C,D}:0.0127200201248;HNF1A:-0.0599702175604;MYB:-0.0663445889295;ALX4:-0.0708551254911;NRF1:-0.094079207839;NANOG{mouse}:-0.110271271211;PAX3,7:-0.113528381781;PRRX1,2:-0.127502976244;RUNX1..3:-0.163819541151;POU3F1..4:-0.166324284932;NKX6-1,2:-0.179570767657;FOSL2:-0.183047735539;FOXM1:-0.18881078083;ATF6:-0.212849046815;LMO2:-0.229372577761;MYBL2:-0.231169534256;CDC5L:-0.23656296474;NFE2:-0.245024604683;JUN:-0.245270033623;PAX8:-0.263652003142;EP300:-0.264476780918;HOX{A6,A7,B6,B7}:-0.290898024273;NFKB1_REL_RELA:-0.302509886125;RFX1:-0.305201839484;ELK1,4_GABP{A,B1}:-0.314421305981;PRDM1:-0.342795361373;SNAI1..3:-0.3469310073;STAT2,4,6:-0.354232470249;HOXA9_MEIS1:-0.358605703217;VSX1,2:-0.360283042729;NKX3-1:-0.3656425779;HAND1,2:-0.376226973158;ARID5B:-0.385886734772;CRX:-0.402060202169;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.412849976701;POU1F1:-0.41458449957;CUX2:-0.444543566985;GATA4:-0.458949402361;ETS1,2:-0.460176855686;HIF1A:-0.46326592571;MYOD1:-0.463806734454;DMAP1_NCOR{1,2}_SMARC:-0.463832061626;HOX{A4,D4}:-0.467839171719;GATA6:-0.475190133064;HSF1,2:-0.477179835956;NFATC1..3:-0.490168496541;DBP:-0.500747516651;T:-0.502369966002;MYFfamily:-0.521794691698;HLF:-0.541903727318;AHR_ARNT_ARNT2:-0.543801210519;SPIB:-0.563312846397;PAX2:-0.575018673686;RORA:-0.611536917453;FOXD3:-0.619464989063;STAT1,3:-0.632814573466;NKX3-2:-0.632838926458;ADNP_IRX_SIX_ZHX:-0.695557692637;SPI1:-0.702925316971;CEBPA,B_DDIT3:-0.753403475851;TGIF1:-0.769172129782;FOXP1:-0.770059100961;PAX6:-0.793731015077;POU6F1:-0.817779459289;FOXQ1:-0.832829535752;NFIL3:-0.833320804341;EVI1:-0.841688427073;PDX1:-0.888479273;PITX1..3:-0.889252442739;FOX{D1,D2}:-0.893149172005;IRF1,2:-0.909150012116;AIRE:-0.916729322539;ELF1,2,4:-0.947762655614;ZEB1:-0.948879115382;NKX2-1,4:-0.952913460216;RBPJ:-0.959969880788;MAFB:-0.961906197757;STAT5{A,B}:-1.0014350925;RFX2..5_RFXANK_RFXAP:-1.02006411438;TEF:-1.02457665267;IKZF2:-1.03131159381;CREB1:-1.03552208915;FOXP3:-1.05246328723;FOX{F1,F2,J1}:-1.05958219604;ATF4:-1.0625273881;HMGA1,2:-1.06640811535;ATF5_CREB3:-1.09398240404;PAX4:-1.10005707389;FOXO1,3,4:-1.1239848159;IRF7:-1.12603081269;FOXA2:-1.18304072957;FOX{I1,J2}:-1.23324912694;ATF2:-1.24991695542;BPTF:-1.29156939044;TLX2:-1.36356733774;HBP1_HMGB_SSRP1_UBTF:-1.40466323994;ALX1:-1.40725499644;CDX1,2,4:-1.44437994002;SREBF1,2:-1.45140234372;FOXN1:-1.6403364944;ZBTB16:-2.09043258883 | |top_motifs=ZIC1..3:1.86297544115;EBF1:1.80159451945;GTF2A1,2:1.6725788926;TFAP2{A,C}:1.64571854176;XCPE1{core}:1.51902160459;GZF1:1.3728093475;RXR{A,B,G}:1.26638888065;PBX1:1.23914219453;ZNF423:1.13429881838;TFAP4:1.0854478286;TFAP2B:1.08092906378;SP1:1.0452340403;GFI1:1.03898768192;ESR1:0.957396061101;ESRRA:0.915262927967;SOX{8,9,10}:0.910221939894;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.881708671774;ZNF148:0.881384119756;MZF1:0.855997514171;PAX1,9:0.84716680372;TEAD1:0.844689322218;RXRA_VDR{dimer}:0.83820766095;LEF1_TCF7_TCF7L1,2:0.835964780369;TLX1..3_NFIC{dimer}:0.803200449351;MTF1:0.797909941234;SPZ1:0.76168256711;POU2F1..3:0.712435231569;TFCP2:0.71198338702;RREB1:0.711510074663;NR6A1:0.691507779612;ZBTB6:0.684084269195;TAL1_TCF{3,4,12}:0.641022091794;HIC1:0.640057834274;LHX3,4:0.639130050119;GTF2I:0.614634891175;NR5A1,2:0.61451682199;PATZ1:0.592689471682;HES1:0.588301588258;NFY{A,B,C}:0.57970383367;E2F1..5:0.566237656946;TFDP1:0.561383023293;HMX1:0.547439879994;PAX5:0.547213050511;HOX{A5,B5}:0.541099992012;TP53:0.508526286497;MTE{core}:0.497702992561;MAZ:0.478320708491;KLF4:0.463895837972;SMAD1..7,9:0.45108939148;HNF4A_NR2F1,2:0.435427054837;GLI1..3:0.415625019226;NR3C1:0.406968704495;PPARG:0.385092800994;SRF:0.373323500315;POU5F1:0.365711183907;NKX2-3_NKX2-5:0.353641186414;SOX17:0.351385042419;ZNF143:0.348471820079;ONECUT1,2:0.337119935512;IKZF1:0.307117421398;bHLH_family:0.301336163962;UFEwm:0.298129691477;GFI1B:0.285133930374;TOPORS:0.281184520644;BREu{core}:0.278946275296;NHLH1,2:0.258862715182;NFE2L1:0.243338039739;EN1,2:0.224059796556;TBX4,5:0.220199027598;YY1:0.220056266371;TBP:0.21873974165;REST:0.209921965221;NR1H4:0.209574804663;MED-1{core}:0.190085271271;AR:0.188715493672;GCM1,2:0.185829108205;ZNF238:0.178568430977;ZFP161:0.152478887468;NKX2-2,8:0.144140252938;EGR1..3:0.137759645757;NFE2L2:0.117288969708;SOX2:0.10270291127;NFIX:0.0802531701907;NANOG:0.0609756125862;XBP1:0.0599185888989;BACH2:0.0359036285295;FOS_FOS{B,L1}_JUN{B,D}:0.0292315156519;OCT4_SOX2{dimer}:0.029046788739;SOX5:0.0240218548129;FOXL1:0.0142700113411;ZNF384:0.0134618512308;MEF2{A,B,C,D}:0.0127200201248;HNF1A:-0.0599702175604;MYB:-0.0663445889295;ALX4:-0.0708551254911;NRF1:-0.094079207839;NANOG{mouse}:-0.110271271211;PAX3,7:-0.113528381781;PRRX1,2:-0.127502976244;RUNX1..3:-0.163819541151;POU3F1..4:-0.166324284932;NKX6-1,2:-0.179570767657;FOSL2:-0.183047735539;FOXM1:-0.18881078083;ATF6:-0.212849046815;LMO2:-0.229372577761;MYBL2:-0.231169534256;CDC5L:-0.23656296474;NFE2:-0.245024604683;JUN:-0.245270033623;PAX8:-0.263652003142;EP300:-0.264476780918;HOX{A6,A7,B6,B7}:-0.290898024273;NFKB1_REL_RELA:-0.302509886125;RFX1:-0.305201839484;ELK1,4_GABP{A,B1}:-0.314421305981;PRDM1:-0.342795361373;SNAI1..3:-0.3469310073;STAT2,4,6:-0.354232470249;HOXA9_MEIS1:-0.358605703217;VSX1,2:-0.360283042729;NKX3-1:-0.3656425779;HAND1,2:-0.376226973158;ARID5B:-0.385886734772;CRX:-0.402060202169;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.412849976701;POU1F1:-0.41458449957;CUX2:-0.444543566985;GATA4:-0.458949402361;ETS1,2:-0.460176855686;HIF1A:-0.46326592571;MYOD1:-0.463806734454;DMAP1_NCOR{1,2}_SMARC:-0.463832061626;HOX{A4,D4}:-0.467839171719;GATA6:-0.475190133064;HSF1,2:-0.477179835956;NFATC1..3:-0.490168496541;DBP:-0.500747516651;T:-0.502369966002;MYFfamily:-0.521794691698;HLF:-0.541903727318;AHR_ARNT_ARNT2:-0.543801210519;SPIB:-0.563312846397;PAX2:-0.575018673686;RORA:-0.611536917453;FOXD3:-0.619464989063;STAT1,3:-0.632814573466;NKX3-2:-0.632838926458;ADNP_IRX_SIX_ZHX:-0.695557692637;SPI1:-0.702925316971;CEBPA,B_DDIT3:-0.753403475851;TGIF1:-0.769172129782;FOXP1:-0.770059100961;PAX6:-0.793731015077;POU6F1:-0.817779459289;FOXQ1:-0.832829535752;NFIL3:-0.833320804341;EVI1:-0.841688427073;PDX1:-0.888479273;PITX1..3:-0.889252442739;FOX{D1,D2}:-0.893149172005;IRF1,2:-0.909150012116;AIRE:-0.916729322539;ELF1,2,4:-0.947762655614;ZEB1:-0.948879115382;NKX2-1,4:-0.952913460216;RBPJ:-0.959969880788;MAFB:-0.961906197757;STAT5{A,B}:-1.0014350925;RFX2..5_RFXANK_RFXAP:-1.02006411438;TEF:-1.02457665267;IKZF2:-1.03131159381;CREB1:-1.03552208915;FOXP3:-1.05246328723;FOX{F1,F2,J1}:-1.05958219604;ATF4:-1.0625273881;HMGA1,2:-1.06640811535;ATF5_CREB3:-1.09398240404;PAX4:-1.10005707389;FOXO1,3,4:-1.1239848159;IRF7:-1.12603081269;FOXA2:-1.18304072957;FOX{I1,J2}:-1.23324912694;ATF2:-1.24991695542;BPTF:-1.29156939044;TLX2:-1.36356733774;HBP1_HMGB_SSRP1_UBTF:-1.40466323994;ALX1:-1.40725499644;CDX1,2,4:-1.44437994002;SREBF1,2:-1.45140234372;FOXN1:-1.6403364944;ZBTB16:-2.09043258883 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11580-120F5;search_select_hide=table117:FF:11580-120F5 | |||
}} | }} | ||
Latest revision as of 18:10, 4 June 2020
| Name: | Astrocyte - cerebellum, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12081 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12081
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12081
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.034 |
| 10 | 10 | 0.0172 |
| 100 | 100 | 0.808 |
| 101 | 101 | 0.141 |
| 102 | 102 | 0.411 |
| 103 | 103 | 0.492 |
| 104 | 104 | 0.494 |
| 105 | 105 | 0.314 |
| 106 | 106 | 0.871 |
| 107 | 107 | 0.0729 |
| 108 | 108 | 0.778 |
| 109 | 109 | 0.864 |
| 11 | 11 | 0.942 |
| 110 | 110 | 0.614 |
| 111 | 111 | 0.0679 |
| 112 | 112 | 0.0735 |
| 113 | 113 | 0.419 |
| 114 | 114 | 0.0571 |
| 115 | 115 | 0.261 |
| 116 | 116 | 0.382 |
| 117 | 117 | 0.313 |
| 118 | 118 | 0.608 |
| 119 | 119 | 0.112 |
| 12 | 12 | 0.896 |
| 120 | 120 | 0.338 |
| 121 | 121 | 0.944 |
| 122 | 122 | 0.77 |
| 123 | 123 | 2.19386e-4 |
| 124 | 124 | 0.739 |
| 125 | 125 | 0.15 |
| 126 | 126 | 0.566 |
| 127 | 127 | 0.566 |
| 128 | 128 | 0.872 |
| 129 | 129 | 0.826 |
| 13 | 13 | 0.583 |
| 130 | 130 | 0.0856 |
| 131 | 131 | 0.268 |
| 132 | 132 | 0.327 |
| 133 | 133 | 0.998 |
| 134 | 134 | 0.685 |
| 135 | 135 | 0.74 |
| 136 | 136 | 0.179 |
| 137 | 137 | 0.0235 |
| 138 | 138 | 0.178 |
| 139 | 139 | 0.0447 |
| 14 | 14 | 0.775 |
| 140 | 140 | 0.416 |
| 141 | 141 | 0.364 |
| 142 | 142 | 0.589 |
| 143 | 143 | 0.679 |
| 144 | 144 | 1 |
| 145 | 145 | 0.742 |
| 146 | 146 | 0.317 |
| 147 | 147 | 0.635 |
| 148 | 148 | 0.0364 |
| 149 | 149 | 0.645 |
| 15 | 15 | 0.111 |
| 150 | 150 | 0.178 |
| 151 | 151 | 0.58 |
| 152 | 152 | 0.217 |
| 153 | 153 | 0.0253 |
| 154 | 154 | 0.23 |
| 155 | 155 | 0.205 |
| 156 | 156 | 0.865 |
| 157 | 157 | 0.642 |
| 158 | 158 | 0.129 |
| 159 | 159 | 0.777 |
| 16 | 16 | 0.814 |
| 160 | 160 | 0.176 |
| 161 | 161 | 0.907 |
| 162 | 162 | 0.403 |
| 163 | 163 | 0.632 |
| 164 | 164 | 0.213 |
| 165 | 165 | 0.0821 |
| 166 | 166 | 0.977 |
| 167 | 167 | 0.104 |
| 168 | 168 | 0.56 |
| 169 | 169 | 0.39 |
| 17 | 17 | 0.743 |
| 18 | 18 | 0.51 |
| 19 | 19 | 0.424 |
| 2 | 2 | 0.383 |
| 20 | 20 | 0.63 |
| 21 | 21 | 0.679 |
| 22 | 22 | 0.409 |
| 23 | 23 | 0.806 |
| 24 | 24 | 0.684 |
| 25 | 25 | 0.369 |
| 26 | 26 | 0.55 |
| 27 | 27 | 0.626 |
| 28 | 28 | 0.175 |
| 29 | 29 | 0.512 |
| 3 | 3 | 0.265 |
| 30 | 30 | 0.0463 |
| 31 | 31 | 0.829 |
| 32 | 32 | 1.50872e-4 |
| 33 | 33 | 0.965 |
| 34 | 34 | 0.299 |
| 35 | 35 | 0.147 |
| 36 | 36 | 0.0456 |
| 37 | 37 | 0.509 |
| 38 | 38 | 0.868 |
| 39 | 39 | 0.652 |
| 4 | 4 | 0.671 |
| 40 | 40 | 0.279 |
| 41 | 41 | 0.224 |
| 42 | 42 | 0.269 |
| 43 | 43 | 0.212 |
| 44 | 44 | 0.982 |
| 45 | 45 | 0.447 |
| 46 | 46 | 0.625 |
| 47 | 47 | 0.634 |
| 48 | 48 | 0.893 |
| 49 | 49 | 0.111 |
| 5 | 5 | 0.143 |
| 50 | 50 | 0.385 |
| 51 | 51 | 0.944 |
| 52 | 52 | 0.926 |
| 53 | 53 | 0.211 |
| 54 | 54 | 0.978 |
| 55 | 55 | 0.698 |
| 56 | 56 | 0.805 |
| 57 | 57 | 0.429 |
| 58 | 58 | 0.0587 |
| 59 | 59 | 0.121 |
| 6 | 6 | 0.417 |
| 60 | 60 | 0.452 |
| 61 | 61 | 0.234 |
| 62 | 62 | 0.0683 |
| 63 | 63 | 0.756 |
| 64 | 64 | 0.681 |
| 65 | 65 | 0.433 |
| 66 | 66 | 0.33 |
| 67 | 67 | 0.781 |
| 68 | 68 | 0.032 |
| 69 | 69 | 0.198 |
| 7 | 7 | 0.51 |
| 70 | 70 | 0.128 |
| 71 | 71 | 0.211 |
| 72 | 72 | 0.13 |
| 73 | 73 | 0.299 |
| 74 | 74 | 0.43 |
| 75 | 75 | 0.0234 |
| 76 | 76 | 0.0337 |
| 77 | 77 | 0.335 |
| 78 | 78 | 0.187 |
| 79 | 79 | 0.251 |
| 8 | 8 | 0.904 |
| 80 | 80 | 0.727 |
| 81 | 81 | 0.255 |
| 82 | 82 | 0.212 |
| 83 | 83 | 0.654 |
| 84 | 84 | 0.275 |
| 85 | 85 | 0.471 |
| 86 | 86 | 0.332 |
| 87 | 87 | 0.533 |
| 88 | 88 | 0.569 |
| 89 | 89 | 0.744 |
| 9 | 9 | 0.378 |
| 90 | 90 | 6.19139e-4 |
| 91 | 91 | 0.857 |
| 92 | 92 | 0.12 |
| 93 | 93 | 0.0727 |
| 94 | 94 | 0.383 |
| 95 | 95 | 0.962 |
| 96 | 96 | 0.164 |
| 97 | 97 | 0.828 |
| 98 | 98 | 0.697 |
| 99 | 99 | 0.0131 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12081
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000195 human astrocyte of the cerebellum sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000128 (oligodendrocyte)
0000126 (macroglial cell)
0000125 (glial cell)
0000255 (eukaryotic cell)
0000127 (astrocyte)
0002603 (astrocyte of the cerebellum)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0002037 (cerebellum)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002680 (regional part of metencephalon)
0002616 (regional part of brain)
0004733 (segmental subdivision of hindbrain)
0004732 (segmental subdivision of nervous system)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001895 (metencephalon)
0002028 (hindbrain)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000195 (human astrocyte of the cerebellum sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000339 (glioblast (sensu Vertebrata))
CL:0000221 (ectodermal cell)
