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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005554
|accession_numbers=CAGE;DRX007809;DRR008681;DRZ000106;DRZ001491;DRZ011456;DRZ012841
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255
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|created_by=
|created_by=
|creation_date=
|creation_date=
|datafreeze_phase=1
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.19!154.65!IRF8;;chr11:47400078..47400106,-!p1@SPI1!2.11!129.11!SPI1;;chr6:135502501..135502546,+!p1@MYB!1.96!107.43!MYB;;chr6:135502408..135502459,+!p2@MYB!1.89!88.16!MYB;;chr2:68592406..68592424,+!p1@PLEK!1.82!64.56!PLEK;;chr7:50344289..50344323,+!p1@IKZF1!1.78!59.90!IKZF1;;chr12:54694758..54694805,-!p1@NFE2!1.63!49.62!NFE2;;chr7:27205136..27205164,-!p1@HOXA9!1.62!40.95!HOXA9;;chr7:115670804..115670825,-!p1@TFEC!1.62!40.47!TFEC;;chr12:54778471..54778528,-!p1@ZNF385A!1.58!37.26!ZNF385A;;chr19:33793430..33793447,-!p1@CEBPA!1.55!140.68!CEBPA;;chr2:172949484..172949522,+!p1@DLX1!1.54!34.04!DLX1;;chr2:100759037..100759058,-!p2@AFF3!1.51!31.64!AFF3;;chr1:92951607..92951661,-!p1@GFI1!1.49!29.87!GFI1;;chr10:124907645..124907660,+!p1@HMX2!1.45!27.46!HMX2;;chr1:25291475..25291511,-!p2@RUNX3!1.41!24.89!RUNX3;;chr19:13213662..13213686,-!p1@LYL1!1.37!32.60!LYL1;;chr9:77112244..77112262,+!p1@RORB!1.33!22.64!RORB;;chr2:100759010..100759035,-!p1@AFF3!1.32!19.75!AFF3;;chr7:27205106..27205134,-!p2@HOXA9!1.31!19.43!HOXA9;;chr2:200322654..200322707,-!p2@SATB2!1.28!26.02!SATB2;;chr2:60780607..60780624,-!p2@BCL11A!1.27!53.80!BCL11A;;chr18:55102598..55102623,+!p1@ONECUT2!1.25!16.70!ONECUT2;;chr12:54694807..54694832,-!p3@NFE2!1.24!16.38!NFE2;;chr2:145277640..145277771,-!p1@ZEB2!1.22!202.98!ZEB2;;chr19:13213954..13214021,-!p4@LYL1!1.22!15.42!LYL1;;chr13:41593425..41593480,-!p1@ELF1!1.21!94.43!ELF1;;chr7:27192185..27192209,-!p1@HOXA3!1.21!15.26!HOXA3;;chr19:12203100..12203132,+!p1@ZNF788!1.20!30.19!ZNF788;;chr10:124895472..124895508,+!p1@HMX3!1.20!14.93!HMX3;;chr6:10412600..10412637,-!p1@TFAP2A!1.19!24.25!TFAP2A;;chr2:68592394..68592405,+!p2@PLEK!1.19!14.61!PLEK;;chr19:2867325..2867348,+!p1@ZNF556!1.17!13.65!ZNF556;;chr18:77155922..77155939,+!p1@NFATC1!1.16!36.77!NFATC1;;chr7:50344251..50344288,+!p3@IKZF1!1.16!13.33!IKZF1;;chr11:47400062..47400077,-!p2@SPI1!1.15!13.17!SPI1;;chr6:135502472..135502489,+!p3@MYB!1.15!13.01!MYB;;chr7:50343634..50343717,+!p2@IKZF1!1.14!12.69!IKZF1;;chr19:13213704..13213726,-!p3@LYL1!1.13!16.70!LYL1;;chr9:117150254..117150271,-!p1@AKNA!1.12!33.40!AKNA;;chr11:32457075..32457095,-!p1@WT1!1.12!12.04!WT1;;chr14:75988771..75988826,+!p1@BATF!1.09!15.26!BATF;;chr1:156470515..156470542,-!p2@MEF2D!1.08!58.61!MEF2D;;chr18:55102628..55102646,+!p2@ONECUT2!1.08!11.08!ONECUT2;;chr6:34204973..34204990,+!p4@HMGA1!1.05!137.95!HMGA1;;chr4:87928142..87928165,+!p5@AFF1!1.05!35.81!AFF1;;chr4:87857474..87857489,+!p7@AFF1!1.05!17.83!AFF1;;chr1:92949331..92949377,-!p2@GFI1!1.05!10.12!GFI1;;chr11:47399996..47400014,-!p4@SPI1!1.04!9.96!SPI1;;chr11:32457103..32457123,-!p3@WT1!1.03!9.64!WT1;;chr1:25256756..25256774,-!p1@RUNX3!1.02!17.99!RUNX3;;chr7:113726357..113726443,+!p1@FOXP2!1.02!16.38!FOXP2;;chr15:76629123..76629151,+!p1@ISL2!1.02!10.44!ISL2;;chr15:37392094..37392116,-!p6@MEIS2!1.00!11.24!MEIS2;;chr11:47399947..47399961,-!p3@SPI1!1.00!8.99!SPI1;;chr1:156470494..156470505,-!p3@MEF2D!0.99!12.85!MEF2D;;chr2:102091566..102091581,-!p1@RFX8!0.99!8.83!RFX8;;chr5:321810..321877,+!p1@AHRR!0.96!26.50!AHRR;;chr10:124895548..124895570,+!p2@HMX3!0.95!7.87!HMX3;;chr2:60778035..60778060,-!p4@BCL11A!0.93!9.15!BCL11A;;chr13:41593392..41593403,-!p7@ELF1!0.93!7.55!ELF1;;chr12:54694653..54694672,-!p2@NFE2!0.92!7.39!NFE2;;chr11:128563948..128564003,+!p1@FLI1!0.91!89.93!FLI1;;chr1:23857698..23857733,-!p1@E2F2!0.90!13.17!E2F2;;chr4:87857491..87857519,+!p10@AFF1!0.90!9.80!AFF1;;chr19:2867298..2867317,+!p2@ZNF556!0.90!6.91!ZNF556;;chr7:27213893..27213954,-!p1@HOXA10!0.90!6.91!HOXA10;;chr1:3569072..3569093,+!p1@TP73!0.90!6.91!TP73;;chr8:128748308..128748324,+!p2@MYC!0.88!190.46!MYC;;chr19:45579725..45579743,-!p1@ZNF296!0.88!30.83!ZNF296;;chr17:41623692..41623715,-!p1@ETV4!0.87!29.07!ETV4;;chr11:47400032..47400043,-!p5@SPI1!0.87!6.42!SPI1;;chr2:60780753..60780800,-!p1@BCL11A!0.86!32.44!BCL11A;;chr11:130184470..130184533,-!p2@ZBTB44!0.86!17.99!ZBTB44;;chr2:172967621..172967637,-!p1@DLX2!0.85!17.18!DLX2;;chr12:11802547..11802560,+!p5@ETV6!0.85!8.67!ETV6;;chr6:135513595..135513617,+!p4@MYB!0.85!6.10!MYB;;chr6:28304275..28304282,-!p7@ZNF323!0.85!6.10!ZNF323;;chr22:29196547..29196563,-!p2@XBP1!0.84!232.05!XBP1;;chr10:124907876..124907888,+!p5@HMX2!0.84!5.94!HMX2;;chr6:21593973..21593988,+!p1@SOX4!0.82!215.83!SOX4;;chr4:87928166..87928186,+!p12@AFF1!0.82!8.99!AFF1;;chr2:172950227..172950249,+!p2@DLX1!0.82!5.62!DLX1;;chr1:92952473..92952489,-!p3@GFI1!0.82!5.62!GFI1;;chr6:20402102..20402152,+!p1@E2F3!0.81!24.25!E2F3;;chr5:322733..322758,+!p2@AHRR!0.81!5.46!AHRR;;chr2:200320768..200320800,-!p4@SATB2!0.81!5.46!SATB2;;chr20:42295713..42295738,+!p2@MYBL2!0.80!34.04!MYBL2;;chr19:23433144..23433204,-!p1@ZNF724P!0.80!25.85!ZNF724P;;chr17:79881332..79881348,-!p3@MAFG!0.80!8.03!MAFG;;chr3:128212033..128212051,-!p1@GATA2!0.80!5.30!GATA2;;chr20:42295745..42295765,+!p1@MYBL2!0.79!92.18!MYBL2;;chr4:4291837..4291859,-!p2@LYAR!0.79!17.99!LYAR;;chr19:21950332..21950356,-!p2@ZNF100!0.79!11.56!ZNF100;;chr2:60781201..60781258,-!p3@BCL11A!0.79!5.14!BCL11A;;chr9:117160738..117160782,-!p2@AKNA!0.78!22.48!AKNA;;chr7:50348268..50348366,+!p4@IKZF1!0.78!4.98!IKZF1;;chr11:47400045..47400060,-!p6@SPI1!0.78!4.98!SPI1;;chr8:128748470..128748487,+!p1@MYC!0.77!588.39!MYC;;chr16:88752889..88752921,-!p1@SNAI3!0.77!5.78!SNAI3;;chr8:145669791..145669834,-!p1@TONSL!0.76!14.77!TONSL;;chr6:10412392..10412409,-!p4@TFAP2A!0.76!5.46!TFAP2A;;chr10:124895227..124895241,+!p5@HMX3!0.76!4.82!HMX3;;chr4:4291861..4291913,-!p1@LYAR!0.75!119.80!LYAR;;chr19:21264991..21265026,+!p1@ZNF714!0.75!33.56!ZNF714;;chr17:41277372..41277418,-!p1@BRCA1!0.75!18.31!BRCA1;;chr1:221052776..221052799,+!p1@HLX!0.75!8.83!HLX;;chr7:128577972..128578047,+!p1@IRF5!0.75!7.55!IRF5;;chr8:128747661..128747703,+!p6@MYC!0.75!6.42!MYC;;chr4:81118647..81118666,+!p1@PRDM8!0.75!6.26!PRDM8;;chr1:221052994..221053008,+!p6@HLX!0.75!5.62!HLX;;chr13:41593405..41593416,-!p9@ELF1!0.75!4.66!ELF1;;chr19:10305581..10305646,-!p1@DNMT1!0.74!173.44!DNMT1;;chr17:42295777..42295816,-!p7@UBTF!0.74!5.62!UBTF;;chr10:124907828..124907837,+!p6@HMX2!0.74!4.50!HMX2;;chr19:12163769..12163798,-!p1@ZNF878!0.73!5.78!ZNF878;;chr3:71631151..71631194,-!p15@FOXP1!0.73!4.98!FOXP1;;chr16:88752861..88752884,-!p2@SNAI3!0.73!4.34!SNAI3;;chr1:156460436..156460462,-!p7@MEF2D!0.73!4.34!MEF2D;;chrY:2803415..2803468,+!p1@ZFY!0.73!4.34!ZFY;;chr6:21597765..21597779,+!p2@SOX4!0.72!38.70!SOX4;;chr5:138609782..138609826,+!p5@MATR3!0.72!30.99!MATR3;;chr19:21950362..21950388,-!p1@ZNF100!0.71!41.75!ZNF100;;chr10:131762504..131762555,-!p1@EBF3!0.71!4.18!EBF3;;chr21:36260980..36261011,-!p1@RUNX1!0.70!132.81!RUNX1;;chr7:27196267..27196311,-!p1@HOXA7!0.70!4.01!HOXA7;;chr15:37390850..37390909,-!p3@MEIS2!0.69!8.35!MEIS2;;chr4:87927888..87927912,+!p18@AFF1!0.69!3.85!AFF1;;chr4:87928105..87928126,+!p13@AFF1!0.68!5.94!AFF1;;chr14:45722360..45722415,-!p1@MIS18BP1!0.67!66.80!MIS18BP1;;chr15:76629097..76629120,+!p2@ISL2!0.67!4.18!ISL2;;chr14:89628064..89628109,-!p4@FOXN3!0.66!8.03!FOXN3;;chr1:221052840..221052875,+!p4@HLX!0.66!4.34!HLX;;chr10:124907798..124907817,+!p3@HMX2!0.66!3.53!HMX2;;chr2:100759060..100759073,-!p8@AFF3!0.66!3.53!AFF3;;chr1:156470323..156470332,-!p4@MEF2D!0.65!5.62!MEF2D;;chr3:63953435..63953499,+!p1@ATXN7!0.64!3.37!ATXN7;;chr7:148581360..148581425,-!p1@EZH2!0.63!18.79!EZH2;;chr19:1652555..1652568,-!p2@TCF3!0.63!15.58!TCF3;;chr1:35656508..35656584,-!p2@SFPQ!0.63!11.88!SFPQ;;chr5:176738887..176738934,-!p1@MXD3!0.62!25.21!MXD3;;chr17:42295897..42295953,-!p10@UBTF!0.62!4.50!UBTF;;chr17:42295682..42295731,-!p17@UBTF!0.62!3.21!UBTF;;chr7:27196217..27196246,-!p2@HOXA7!0.62!3.21!HOXA7;;chr7:27224842..27224872,-!p1@HOXA11!0.62!3.21!HOXA11;;chr2:200322229..200322251,-!p3@SATB2!0.62!3.21!SATB2;;chr10:131762589..131762601,-!p3@EBF3!0.62!3.21!EBF3;;chr19:42636586..42636607,-!p1@POU2F2!0.61!9.80!POU2F2;;chr6:20402070..20402082,+!p5@E2F3!0.61!3.69!E2F3;;chr10:45496320..45496336,+!p3@ZNF22!0.61!3.05!ZNF22;;chr2:43453734..43453751,-!p1@ZFP36L2!0.60!390.23!ZFP36L2;;chr19:11071685..11071798,+!p1@SMARCA4!0.60!101.97!SMARCA4;;chr19:36705998..36706021,+!p2@ZNF146!0.60!52.03!ZNF146;;chr19:24269981..24270007,+!p2@ZNF254!0.60!22.96!ZNF254;;chr7:64363638..64363667,+!p1@ZNF273!0.60!17.83!ZNF273;;chr19:926055..926068,+!p2@ARID3A!0.60!7.39!ARID3A;;chr14:55493763..55493824,-!p1@WDHD1!0.59!26.66!WDHD1;;chr6:7107999..7108031,+!p2@RREB1!0.59!18.31!RREB1;;chr22:50247528..50247568,+!p2@ZBED4!0.59!8.03!ZBED4;;chr19:925727..925784,+!p3@ARID3A!0.59!7.07!ARID3A;;chr12:2986275..2986363,-!p1@FOXM1!0.58!34.53!FOXM1;;chr15:37392616..37392638,-!p2@MEIS2!0.58!10.28!MEIS2;;chr18:3449527..3449582,+!p6@TGIF1!0.57!5.78!TGIF1;;chr2:208031943..208031978,-!p5@KLF7!0.57!3.85!KLF7;;chr4:26321361..26321377,+!p6@RBPJ!0.57!3.69!RBPJ;;chr2:102091144..102091183,-!p2@RFX8!0.57!2.73!RFX8;;chr4:87857538..87857549,+!p19@AFF1!0.57!2.73!AFF1;;chr6:135516877..135516900,+!p5@MYB!0.57!2.73!MYB;;chr9:77112225..77112238,+!p2@RORB!0.57!2.73!RORB;;chr21:36421535..36421610,-!p2@RUNX1!0.56!11.24!RUNX1;;chr1:35656397..35656455,-!p3@SFPQ!0.56!7.07!SFPQ;;chr7:64126535..64126559,+!p2@ZNF107!0.56!6.42!ZNF107;;chr4:87968203..87968221,+!p11@AFF1!0.56!4.82!AFF1;;chr7:64838754..64838778,+!p1@ZNF92!0.55!30.19!ZNF92;;chr20:32274179..32274213,-!p1@E2F1!0.55!21.20!E2F1;;chr4:87857433..87857472,+!p9@AFF1!0.55!5.14!AFF1;;chr6:45390002..45390023,+!p6@RUNX2!0.55!4.98!RUNX2;;chr11:130184644..130184662,-!p5@ZBTB44!0.55!4.66!ZBTB44;;chr19:45579762..45579772,-!p2@ZNF296!0.55!2.89!ZNF296;;chr6:135516909..135516925,+!p6@MYB!0.55!2.57!MYB;;chr2:63277948..63277974,+!p1@OTX1!0.55!2.57!OTX1;;chr16:4322832..4322907,-!p1@TFAP4!0.54!23.61!TFAP4;;chr4:1873011..1873063,+!p2@WHSC1!0.54!10.12!WHSC1;;chr5:76383070..76383117,-!p3@ZBED3!0.54!5.78!ZBED3;;chr13:46543725..46543747,-!p2@ZC3H13!0.54!5.30!ZC3H13;;chr21:36260295..36260310,-!p3@RUNX1!0.54!4.50!RUNX1;;chr2:219524193..219524205,-!p3@ZNF142!0.54!3.05!ZNF142;;chr6:34204642..34204664,+!p2@HMGA1!0.53!417.53!HMGA1;;chr10:45496346..45496409,+!p1@ZNF22!0.53!43.04!ZNF22;;chr19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|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.19!154.65!IRF8;;chr11:47400078..47400106,-!p1@SPI1!2.11!129.11!SPI1;;chr6:135502501..135502546,+!p1@MYB!1.96!107.43!MYB;;chr6:135502408..135502459,+!p2@MYB!1.89!88.16!MYB;;chr2:68592406..68592424,+!p1@PLEK!1.82!64.56!PLEK;;chr7:50344289..50344323,+!p1@IKZF1!1.78!59.90!IKZF1;;chr12:54694758..54694805,-!p1@NFE2!1.63!49.62!NFE2;;chr7:27205136..27205164,-!p1@HOXA9!1.62!40.95!HOXA9;;chr7:115670804..115670825,-!p1@TFEC!1.62!40.47!TFEC;;chr12:54778471..54778528,-!p1@ZNF385A!1.58!37.26!ZNF385A;;chr19:33793430..33793447,-!p1@CEBPA!1.55!140.68!CEBPA;;chr2:172949484..172949522,+!p1@DLX1!1.54!34.04!DLX1;;chr2:100759037..100759058,-!p2@AFF3!1.51!31.64!AFF3;;chr1:92951607..92951661,-!p1@GFI1!1.49!29.87!GFI1;;chr10:124907645..124907660,+!p1@HMX2!1.45!27.46!HMX2;;chr1:25291475..25291511,-!p2@RUNX3!1.41!24.89!RUNX3;;chr19:13213662..13213686,-!p1@LYL1!1.37!32.60!LYL1;;chr9:77112244..77112262,+!p1@RORB!1.33!22.64!RORB;;chr2:100759010..100759035,-!p1@AFF3!1.32!19.75!AFF3;;chr7:27205106..27205134,-!p2@HOXA9!1.31!19.43!HOXA9;;chr2:200322654..200322707,-!p2@SATB2!1.28!26.02!SATB2;;chr2:60780607..60780624,-!p2@BCL11A!1.27!53.80!BCL11A;;chr18:55102598..55102623,+!p1@ONECUT2!1.25!16.70!ONECUT2;;chr12:54694807..54694832,-!p3@NFE2!1.24!16.38!NFE2;;chr2:145277640..145277771,-!p1@ZEB2!1.22!202.98!ZEB2;;chr19:13213954..13214021,-!p4@LYL1!1.22!15.42!LYL1;;chr13:41593425..41593480,-!p1@ELF1!1.21!94.43!ELF1;;chr7:27192185..27192209,-!p1@HOXA3!1.21!15.26!HOXA3;;chr19:12203100..12203132,+!p1@ZNF788!1.20!30.19!ZNF788;;chr10:124895472..124895508,+!p1@HMX3!1.20!14.93!HMX3;;chr6:10412600..10412637,-!p1@TFAP2A!1.19!24.25!TFAP2A;;chr2:68592394..68592405,+!p2@PLEK!1.19!14.61!PLEK;;chr19:2867325..2867348,+!p1@ZNF556!1.17!13.65!ZNF556;;chr18:77155922..77155939,+!p1@NFATC1!1.16!36.77!NFATC1;;chr7:50344251..50344288,+!p3@IKZF1!1.16!13.33!IKZF1;;chr11:47400062..47400077,-!p2@SPI1!1.15!13.17!SPI1;;chr6:135502472..135502489,+!p3@MYB!1.15!13.01!MYB;;chr7:50343634..50343717,+!p2@IKZF1!1.14!12.69!IKZF1;;chr19:13213704..13213726,-!p3@LYL1!1.13!16.70!LYL1;;chr9:117150254..117150271,-!p1@AKNA!1.12!33.40!AKNA;;chr11:32457075..32457095,-!p1@WT1!1.12!12.04!WT1;;chr14:75988771..75988826,+!p1@BATF!1.09!15.26!BATF;;chr1:156470515..156470542,-!p2@MEF2D!1.08!58.61!MEF2D;;chr18:55102628..55102646,+!p2@ONECUT2!1.08!11.08!ONECUT2;;chr6:34204973..34204990,+!p4@HMGA1!1.05!137.95!HMGA1;;chr4:87928142..87928165,+!p5@AFF1!1.05!35.81!AFF1;;chr4:87857474..87857489,+!p7@AFF1!1.05!17.83!AFF1;;chr1:92949331..92949377,-!p2@GFI1!1.05!10.12!GFI1;;chr11:47399996..47400014,-!p4@SPI1!1.04!9.96!SPI1;;chr11:32457103..32457123,-!p3@WT1!1.03!9.64!WT1;;chr1:25256756..25256774,-!p1@RUNX3!1.02!17.99!RUNX3;;chr7:113726357..113726443,+!p1@FOXP2!1.02!16.38!FOXP2;;chr15:76629123..76629151,+!p1@ISL2!1.02!10.44!ISL2;;chr15:37392094..37392116,-!p6@MEIS2!1.00!11.24!MEIS2;;chr11:47399947..47399961,-!p3@SPI1!1.00!8.99!SPI1;;chr1:156470494..156470505,-!p3@MEF2D!0.99!12.85!MEF2D;;chr2:102091566..102091581,-!p1@RFX8!0.99!8.83!RFX8;;chr5:321810..321877,+!p1@AHRR!0.96!26.50!AHRR;;chr10:124895548..124895570,+!p2@HMX3!0.95!7.87!HMX3;;chr2:60778035..60778060,-!p4@BCL11A!0.93!9.15!BCL11A;;chr13:41593392..41593403,-!p7@ELF1!0.93!7.55!ELF1;;chr12:54694653..54694672,-!p2@NFE2!0.92!7.39!NFE2;;chr11:128563948..128564003,+!p1@FLI1!0.91!89.93!FLI1;;chr1:23857698..23857733,-!p1@E2F2!0.90!13.17!E2F2;;chr4:87857491..87857519,+!p10@AFF1!0.90!9.80!AFF1;;chr19:2867298..2867317,+!p2@ZNF556!0.90!6.91!ZNF556;;chr7:27213893..27213954,-!p1@HOXA10!0.90!6.91!HOXA10;;chr1:3569072..3569093,+!p1@TP73!0.90!6.91!TP73;;chr8:128748308..128748324,+!p2@MYC!0.88!190.46!MYC;;chr19:45579725..45579743,-!p1@ZNF296!0.88!30.83!ZNF296;;chr17:41623692..41623715,-!p1@ETV4!0.87!29.07!ETV4;;chr11:47400032..47400043,-!p5@SPI1!0.87!6.42!SPI1;;chr2:60780753..60780800,-!p1@BCL11A!0.86!32.44!BCL11A;;chr11:130184470..130184533,-!p2@ZBTB44!0.86!17.99!ZBTB44;;chr2:172967621..172967637,-!p1@DLX2!0.85!17.18!DLX2;;chr12:11802547..11802560,+!p5@ETV6!0.85!8.67!ETV6;;chr6:135513595..135513617,+!p4@MYB!0.85!6.10!MYB;;chr6:28304275..28304282,-!p7@ZNF323!0.85!6.10!ZNF323;;chr22:29196547..29196563,-!p2@XBP1!0.84!232.05!XBP1;;chr10:124907876..124907888,+!p5@HMX2!0.84!5.94!HMX2;;chr6:21593973..21593988,+!p1@SOX4!0.82!215.83!SOX4;;chr4:87928166..87928186,+!p12@AFF1!0.82!8.99!AFF1;;chr2:172950227..172950249,+!p2@DLX1!0.82!5.62!DLX1;;chr1:92952473..92952489,-!p3@GFI1!0.82!5.62!GFI1;;chr6:20402102..20402152,+!p1@E2F3!0.81!24.25!E2F3;;chr5:322733..322758,+!p2@AHRR!0.81!5.46!AHRR;;chr2:200320768..200320800,-!p4@SATB2!0.81!5.46!SATB2;;chr20:42295713..42295738,+!p2@MYBL2!0.80!34.04!MYBL2;;chr19:23433144..23433204,-!p1@ZNF724P!0.80!25.85!ZNF724P;;chr17:79881332..79881348,-!p3@MAFG!0.80!8.03!MAFG;;chr3:128212033..128212051,-!p1@GATA2!0.80!5.30!GATA2;;chr20:42295745..42295765,+!p1@MYBL2!0.79!92.18!MYBL2;;chr4:4291837..4291859,-!p2@LYAR!0.79!17.99!LYAR;;chr19:21950332..21950356,-!p2@ZNF100!0.79!11.56!ZNF100;;chr2:6078120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|ffid_belonging_in_development=CL:0000049,CL:0000134
|fonse_cell_line=FF:0101035
|fonse_cell_line=FF:0101035
|fonse_cell_line_closure=FF:0101035
|fonse_cell_line_closure=FF:0101035
Line 37: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M4eo%2529%2520cell%2520line%253aEoL-1.CNhs13056.10832-111D4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M4eo%2529%2520cell%2520line%253aEoL-1.CNhs13056.10832-111D4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M4eo%2529%2520cell%2520line%253aEoL-1.CNhs13056.10832-111D4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M4eo%2529%2520cell%2520line%253aEoL-1.CNhs13056.10832-111D4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M4eo%2529%2520cell%2520line%253aEoL-1.CNhs13056.10832-111D4.hg38.nobarcode.ctss.bed.gz
|id=FF:10832-111D4
|id=FF:10832-111D4
|is_a=EFO:0002091;;FF:0000210;;FF:0101883
|is_a=EFO:0002091;;FF:0000210;;FF:0101883
|is_obsolete=
|is_obsolete=
|library_id=CNhs13056
|library_id_phase_based=2:CNhs13056
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10832
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10832
|name=acute myeloid leukemia (FAB M4eo) cell line:EoL-1
|name=acute myeloid leukemia (FAB M4eo) cell line:EoL-1
|namespace=FANTOM5
|namespace=FANTOM5
Line 45: Line 60:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs13056,LSID1000,release012,COMPLETED
|profile_hcage=CNhs13056,LSID1000,release012,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
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Line 60: Line 78:
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|sample_age=33
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|sample_cell_line=EoL-1 cell
|sample_cell_line=EoL-1 cell
Line 81: Line 100:
|top_motifs=MYB:2.48174527539;E2F1..5:1.87152685531;FOXD3:1.83303293813;YY1:1.71678035052;DMAP1_NCOR{1,2}_SMARC:1.56668120523;NKX2-2,8:1.42291291071;AIRE:1.37907773727;PITX1..3:1.31138572899;ZBTB16:1.28356989866;CDX1,2,4:1.18466461265;SPIB:1.12842943388;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.07551393864;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.06291122802;POU2F1..3:1.05823711614;SPI1:0.963842906596;RUNX1..3:0.946393178056;TOPORS:0.915354584669;IKZF2:0.89851781782;ELF1,2,4:0.8919502595;FOXP3:0.861037870554;ELK1,4_GABP{A,B1}:0.854423609232;NR5A1,2:0.826862764226;NFY{A,B,C}:0.798899482126;NRF1:0.777009354451;CUX2:0.764554485177;ZNF143:0.754681327546;HBP1_HMGB_SSRP1_UBTF:0.729015261743;BREu{core}:0.723886433116;AHR_ARNT_ARNT2:0.721671964374;FOXA2:0.702413378974;HAND1,2:0.69954671994;TEF:0.694697899247;PAX4:0.637258540002;OCT4_SOX2{dimer}:0.622293737553;FOXQ1:0.599779149351;NANOG{mouse}:0.53446936417;STAT1,3:0.517301785966;GFI1:0.512079361334;TLX2:0.502549461005;GATA4:0.502512244833;GATA6:0.499648648635;POU5F1:0.480619610568;FOX{I1,J2}:0.453673683452;ALX1:0.435363482514;NFIL3:0.4208074856;ETS1,2:0.410609519966;ZNF384:0.406046647235;HES1:0.403451797811;VSX1,2:0.389883337476;FOXP1:0.386371500605;NFE2L1:0.359678669544;MYOD1:0.357375675591;CRX:0.356315229024;PBX1:0.353215941438;KLF4:0.348351452863;NKX3-1:0.342871036696;RFX2..5_RFXANK_RFXAP:0.339123794814;POU1F1:0.318271791745;ARID5B:0.290047623723;RXRA_VDR{dimer}:0.275011084561;STAT5{A,B}:0.274367000516;CEBPA,B_DDIT3:0.273498741669;PAX8:0.264110748702;HSF1,2:0.250315533618;POU3F1..4:0.242004809448;SOX{8,9,10}:0.226790994224;EVI1:0.22613164519;ZNF238:0.206622536512;T:0.132215483732;DBP:0.130681929297;PAX6:0.0929291842584;PRDM1:0.0641779338654;AR:0.0522989218897;ATF5_CREB3:0.0459269603592;HOX{A4,D4}:0.0449425878319;NR6A1:0.0317031577339;NKX3-2:0.00299610700839;PDX1:-0.0255484197592;PAX5:-0.039728200674;bHLH_family:-0.0491865083226;BPTF:-0.0617898256551;GCM1,2:-0.0686610841302;EN1,2:-0.073141936302;HNF4A_NR2F1,2:-0.0751190332859;PAX3,7:-0.0961119293068;NANOG:-0.101933587833;HOX{A6,A7,B6,B7}:-0.108533701706;TFDP1:-0.120028478834;UFEwm:-0.133328112459;PRRX1,2:-0.144364016935;IRF1,2:-0.164945308258;ATF4:-0.16951155936;NFKB1_REL_RELA:-0.170481841039;FOXM1:-0.183974974589;NKX6-1,2:-0.192547411828;NFE2:-0.198608894428;SOX17:-0.225213963963;HNF1A:-0.23118167216;SRF:-0.23502770959;FOX{F1,F2,J1}:-0.269913413578;HOX{A5,B5}:-0.270488170738;NR1H4:-0.283937128214;ZEB1:-0.297717921479;HLF:-0.307889605291;RORA:-0.315634964086;IRF7:-0.318794929695;PAX2:-0.333953457905;CREB1:-0.347088603159;FOS_FOS{B,L1}_JUN{B,D}:-0.351681281199;TGIF1:-0.399436199214;POU6F1:-0.425679163421;ONECUT1,2:-0.42818200028;MEF2{A,B,C,D}:-0.432685498577;FOSL2:-0.439455990896;REST:-0.441374176881;NKX2-3_NKX2-5:-0.447488075841;STAT2,4,6:-0.462061809848;NHLH1,2:-0.465587533388;RXR{A,B,G}:-0.497022339681;PPARG:-0.497280621421;SNAI1..3:-0.505283646959;GZF1:-0.506631038437;MYBL2:-0.51085936523;ZNF423:-0.518305281769;LEF1_TCF7_TCF7L1,2:-0.519319780234;NFIX:-0.539337473587;ESR1:-0.576778599895;HOXA9_MEIS1:-0.579378188364;EP300:-0.588267081436;NFE2L2:-0.588542123157;BACH2:-0.600006696333;LMO2:-0.638474297966;GFI1B:-0.654622679639;MTF1:-0.691487090818;SREBF1,2:-0.694973564443;SOX5:-0.695960101034;FOXN1:-0.697169775671;ADNP_IRX_SIX_ZHX:-0.728004640236;SOX2:-0.730037499944;RFX1:-0.734159574364;TAL1_TCF{3,4,12}:-0.739339578375;FOXO1,3,4:-0.759033840858;ESRRA:-0.776268382714;NKX2-1,4:-0.794759772531;FOXL1:-0.795029369601;CDC5L:-0.802873408578;ZFP161:-0.817847427192;TP53:-0.828539120784;HMGA1,2:-0.837403688405;RREB1:-0.847451232812;MYFfamily:-0.859728001096;GTF2A1,2:-0.86623955074;LHX3,4:-0.880097269939;FOX{D1,D2}:-0.887408174891;TBP:-0.898470226652;ZNF148:-0.923466496303;MZF1:-0.953819947367;NFATC1..3:-0.986314106617;GTF2I:-0.989169323043;XBP1:-0.998005564035;HMX1:-1.02414377674;TFAP4:-1.02929874397;NR3C1:-1.04599726851;TFAP2{A,C}:-1.07778488054;IKZF1:-1.08089253295;PAX1,9:-1.09511448338;ALX4:-1.09889998339;ATF2:-1.10168268946;MED-1{core}:-1.12279920056;ZIC1..3:-1.16312975749;GLI1..3:-1.17760270036;ZBTB6:-1.19187429959;MTE{core}:-1.21266462121;RBPJ:-1.22027501229;TEAD1:-1.22781370963;SMAD1..7,9:-1.22868387562;HIC1:-1.27056844411;TLX1..3_NFIC{dimer}:-1.27790265618;EBF1:-1.30664913745;JUN:-1.3247457759;MAFB:-1.45828177243;SPZ1:-1.46807451575;HIF1A:-1.52753882272;XCPE1{core}:-1.53338889469;TFCP2:-1.58449758762;MAZ:-1.63497943399;PATZ1:-1.64845164435;TFAP2B:-1.7266739811;TBX4,5:-1.80596765155;ATF6:-1.82988586897;EGR1..3:-1.95074430959;SP1:-2.05423887676
|top_motifs=MYB:2.48174527539;E2F1..5:1.87152685531;FOXD3:1.83303293813;YY1:1.71678035052;DMAP1_NCOR{1,2}_SMARC:1.56668120523;NKX2-2,8:1.42291291071;AIRE:1.37907773727;PITX1..3:1.31138572899;ZBTB16:1.28356989866;CDX1,2,4:1.18466461265;SPIB:1.12842943388;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.07551393864;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.06291122802;POU2F1..3:1.05823711614;SPI1:0.963842906596;RUNX1..3:0.946393178056;TOPORS:0.915354584669;IKZF2:0.89851781782;ELF1,2,4:0.8919502595;FOXP3:0.861037870554;ELK1,4_GABP{A,B1}:0.854423609232;NR5A1,2:0.826862764226;NFY{A,B,C}:0.798899482126;NRF1:0.777009354451;CUX2:0.764554485177;ZNF143:0.754681327546;HBP1_HMGB_SSRP1_UBTF:0.729015261743;BREu{core}:0.723886433116;AHR_ARNT_ARNT2:0.721671964374;FOXA2:0.702413378974;HAND1,2:0.69954671994;TEF:0.694697899247;PAX4:0.637258540002;OCT4_SOX2{dimer}:0.622293737553;FOXQ1:0.599779149351;NANOG{mouse}:0.53446936417;STAT1,3:0.517301785966;GFI1:0.512079361334;TLX2:0.502549461005;GATA4:0.502512244833;GATA6:0.499648648635;POU5F1:0.480619610568;FOX{I1,J2}:0.453673683452;ALX1:0.435363482514;NFIL3:0.4208074856;ETS1,2:0.410609519966;ZNF384:0.406046647235;HES1:0.403451797811;VSX1,2:0.389883337476;FOXP1:0.386371500605;NFE2L1:0.359678669544;MYOD1:0.357375675591;CRX:0.356315229024;PBX1:0.353215941438;KLF4:0.348351452863;NKX3-1:0.342871036696;RFX2..5_RFXANK_RFXAP:0.339123794814;POU1F1:0.318271791745;ARID5B:0.290047623723;RXRA_VDR{dimer}:0.275011084561;STAT5{A,B}:0.274367000516;CEBPA,B_DDIT3:0.273498741669;PAX8:0.264110748702;HSF1,2:0.250315533618;POU3F1..4:0.242004809448;SOX{8,9,10}:0.226790994224;EVI1:0.22613164519;ZNF238:0.206622536512;T:0.132215483732;DBP:0.130681929297;PAX6:0.0929291842584;PRDM1:0.0641779338654;AR:0.0522989218897;ATF5_CREB3:0.0459269603592;HOX{A4,D4}:0.0449425878319;NR6A1:0.0317031577339;NKX3-2:0.00299610700839;PDX1:-0.0255484197592;PAX5:-0.039728200674;bHLH_family:-0.0491865083226;BPTF:-0.0617898256551;GCM1,2:-0.0686610841302;EN1,2:-0.073141936302;HNF4A_NR2F1,2:-0.0751190332859;PAX3,7:-0.0961119293068;NANOG:-0.101933587833;HOX{A6,A7,B6,B7}:-0.108533701706;TFDP1:-0.120028478834;UFEwm:-0.133328112459;PRRX1,2:-0.144364016935;IRF1,2:-0.164945308258;ATF4:-0.16951155936;NFKB1_REL_RELA:-0.170481841039;FOXM1:-0.183974974589;NKX6-1,2:-0.192547411828;NFE2:-0.198608894428;SOX17:-0.225213963963;HNF1A:-0.23118167216;SRF:-0.23502770959;FOX{F1,F2,J1}:-0.269913413578;HOX{A5,B5}:-0.270488170738;NR1H4:-0.283937128214;ZEB1:-0.297717921479;HLF:-0.307889605291;RORA:-0.315634964086;IRF7:-0.318794929695;PAX2:-0.333953457905;CREB1:-0.347088603159;FOS_FOS{B,L1}_JUN{B,D}:-0.351681281199;TGIF1:-0.399436199214;POU6F1:-0.425679163421;ONECUT1,2:-0.42818200028;MEF2{A,B,C,D}:-0.432685498577;FOSL2:-0.439455990896;REST:-0.441374176881;NKX2-3_NKX2-5:-0.447488075841;STAT2,4,6:-0.462061809848;NHLH1,2:-0.465587533388;RXR{A,B,G}:-0.497022339681;PPARG:-0.497280621421;SNAI1..3:-0.505283646959;GZF1:-0.506631038437;MYBL2:-0.51085936523;ZNF423:-0.518305281769;LEF1_TCF7_TCF7L1,2:-0.519319780234;NFIX:-0.539337473587;ESR1:-0.576778599895;HOXA9_MEIS1:-0.579378188364;EP300:-0.588267081436;NFE2L2:-0.588542123157;BACH2:-0.600006696333;LMO2:-0.638474297966;GFI1B:-0.654622679639;MTF1:-0.691487090818;SREBF1,2:-0.694973564443;SOX5:-0.695960101034;FOXN1:-0.697169775671;ADNP_IRX_SIX_ZHX:-0.728004640236;SOX2:-0.730037499944;RFX1:-0.734159574364;TAL1_TCF{3,4,12}:-0.739339578375;FOXO1,3,4:-0.759033840858;ESRRA:-0.776268382714;NKX2-1,4:-0.794759772531;FOXL1:-0.795029369601;CDC5L:-0.802873408578;ZFP161:-0.817847427192;TP53:-0.828539120784;HMGA1,2:-0.837403688405;RREB1:-0.847451232812;MYFfamily:-0.859728001096;GTF2A1,2:-0.86623955074;LHX3,4:-0.880097269939;FOX{D1,D2}:-0.887408174891;TBP:-0.898470226652;ZNF148:-0.923466496303;MZF1:-0.953819947367;NFATC1..3:-0.986314106617;GTF2I:-0.989169323043;XBP1:-0.998005564035;HMX1:-1.02414377674;TFAP4:-1.02929874397;NR3C1:-1.04599726851;TFAP2{A,C}:-1.07778488054;IKZF1:-1.08089253295;PAX1,9:-1.09511448338;ALX4:-1.09889998339;ATF2:-1.10168268946;MED-1{core}:-1.12279920056;ZIC1..3:-1.16312975749;GLI1..3:-1.17760270036;ZBTB6:-1.19187429959;MTE{core}:-1.21266462121;RBPJ:-1.22027501229;TEAD1:-1.22781370963;SMAD1..7,9:-1.22868387562;HIC1:-1.27056844411;TLX1..3_NFIC{dimer}:-1.27790265618;EBF1:-1.30664913745;JUN:-1.3247457759;MAFB:-1.45828177243;SPZ1:-1.46807451575;HIF1A:-1.52753882272;XCPE1{core}:-1.53338889469;TFCP2:-1.58449758762;MAZ:-1.63497943399;PATZ1:-1.64845164435;TFAP2B:-1.7266739811;TBX4,5:-1.80596765155;ATF6:-1.82988586897;EGR1..3:-1.95074430959;SP1:-2.05423887676
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10832-111D4;search_select_hide=table117:FF:10832-111D4
}}
}}

Latest revision as of 15:08, 3 June 2020

Name:acute myeloid leukemia (FAB M4eo) cell line:EoL-1
Species:Human (Homo sapiens)
Library ID:CNhs13056
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age33
cell typeeosinophil progenitor cell
cell lineEoL-1 cell
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005554
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13056 CAGE DRX007809 DRR008681
Accession ID Hg19

Library idBAMCTSS
CNhs13056 DRZ000106 DRZ001491
Accession ID Hg38

Library idBAMCTSS
CNhs13056 DRZ011456 DRZ012841
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.156
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.609
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0.0647
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0162
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.00575
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.167
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0378
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.187
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0.0323
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.215
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0152
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.741
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.403
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.00354
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0211
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0201
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.6
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.215
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.267
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13056

Jaspar motifP-value
MA0002.21.92405e-4
MA0003.10.963
MA0004.10.104
MA0006.10.201
MA0007.10.541
MA0009.10.296
MA0014.10.753
MA0017.10.0249
MA0018.20.032
MA0019.10.0352
MA0024.11.33005e-5
MA0025.10.343
MA0027.10.255
MA0028.10.00134
MA0029.10.71
MA0030.10.0176
MA0031.10.311
MA0035.20.209
MA0038.10.0946
MA0039.20.229
MA0040.10.292
MA0041.10.156
MA0042.10.723
MA0043.10.496
MA0046.10.127
MA0047.20.611
MA0048.10.212
MA0050.10.736
MA0051.10.183
MA0052.10.0798
MA0055.10.105
MA0057.10.755
MA0058.10.0664
MA0059.18.44664e-4
MA0060.10.0405
MA0061.10.432
MA0062.21.47953e-6
MA0065.20.0337
MA0066.10.536
MA0067.10.921
MA0068.10.0656
MA0069.10.202
MA0070.10.764
MA0071.10.0495
MA0072.10.164
MA0073.10.962
MA0074.10.544
MA0076.16.86913e-4
MA0077.10.691
MA0078.10.67
MA0079.20.0647
MA0080.26.24686e-10
MA0081.10.00134
MA0083.10.282
MA0084.10.96
MA0087.10.458
MA0088.10.00703
MA0090.16.23408e-4
MA0091.10.373
MA0092.10.284
MA0093.10.1
MA0099.20.00785
MA0100.14.74749e-4
MA0101.10.845
MA0102.20.351
MA0103.10.543
MA0104.25.86756e-4
MA0105.10.00149
MA0106.10.128
MA0107.10.201
MA0108.25.19232e-11
MA0111.10.145
MA0112.20.0414
MA0113.10.869
MA0114.10.0555
MA0115.10.028
MA0116.15.10772e-6
MA0117.10.82
MA0119.10.435
MA0122.10.9
MA0124.10.855
MA0125.10.678
MA0131.10.248
MA0135.10.0508
MA0136.11.28301e-15
MA0137.20.994
MA0138.20.955
MA0139.10.393
MA0140.10.258
MA0141.10.035
MA0142.10.076
MA0143.10.129
MA0144.10.88
MA0145.10.513
MA0146.10.192
MA0147.11.29571e-4
MA0148.10.745
MA0149.10.14
MA0150.10.732
MA0152.10.374
MA0153.10.0771
MA0154.10.00702
MA0155.10.712
MA0156.12.21716e-8
MA0157.10.827
MA0159.10.253
MA0160.10.145
MA0162.10.683
MA0163.18.53314e-16
MA0164.10.876
MA0258.10.0772
MA0259.10.0625



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13056

Novel motifP-value
10.0177
100.0114
1000.197
1010.241
1020.776
1030.125
1040.691
1050.496
1060.809
1070.509
1080.792
1090.0448
110.0479
1100.115
1110.0813
1120.458
1130.804
1140.0973
1150.918
1160.305
1170.0389
1180.0386
1190.196
120.857
1200.237
1210.874
1220.761
1230.0104
1240.242
1250.467
1260.182
1270.106
1280.827
1290.352
130.0211
1300.991
1310.479
1320.804
1330.613
1340.99
1350.856
1360.648
1370.217
1380.923
1390.237
140.966
1400.434
1410.0612
1420.417
1430.547
1440.603
1450.722
1460.893
1470.281
1480.0839
1490.832
150.0882
1500.632
1510.793
1520.124
1530.968
1540.811
1550.0806
1560.866
1570.144
1580.994
1590.411
160.811
1600.14
1610.068
1620.916
1630.17
1640.215
1650.0735
1660.518
1670.101
1680.976
1690.227
170.648
180.506
190.575
20.521
200.373
210.0755
220.704
230.253
240.179
250.161
260.0568
270.609
280.843
290.0104
30.0286
300.0926
310.888
320.53
330.319
340.747
350.124
360.00894
370.296
380.337
390.586
40.224
400.203
410.738
420.13
430.405
440.0523
450.358
460.0514
470.0191
480.0424
490.158
50.511
500.849
510.663
520.301
530.509
540.726
550.795
560.95
570.0637
580.21
590.446
60.391
600.847
610.263
620.0788
630.355
640.145
650.877
660.159
670.646
680.818
690.213
70.155
700.381
710.0158
720.894
730.679
740.503
750.0265
760.261
770.864
780.0429
790.48
80.0723
800.469
810.166
820.464
830.464
840.673
850.524
860.633
870.451
880.941
890.954
90.669
900.024
910.393
920.36
930.934
940.237
950.0528
960.621
970.342
980.279
990.438



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13056


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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