FF:11304-117B8: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005996 | |||
|accession_numbers=CAGE;DRX008278;DRR009150;DRZ000575;DRZ001960;DRZ011925;DRZ013310 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002384,UBERON:0000033,UBERON:0000479,UBERON:0001007,UBERON:0004121,UBERON:0004119,UBERON:0010314,UBERON:0011216,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000075,UBERON:0010317,UBERON:0001555,UBERON:0001758,UBERON:0000153,UBERON:0007811,UBERON:0002204,UBERON:0001434,UBERON:0000165,UBERON:0003672,UBERON:0011137,UBERON:0010323,UBERON:0003129 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002384,UBERON:0000033,UBERON:0000479,UBERON:0001007,UBERON:0004121,UBERON:0004119,UBERON:0010314,UBERON:0011216,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000075,UBERON:0010317,UBERON:0001555,UBERON:0001758,UBERON:0000153,UBERON:0007811,UBERON:0002204,UBERON:0001434,UBERON:0000165,UBERON:0003672,UBERON:0011137,UBERON:0010323,UBERON:0003129 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002556 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002556 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr9:132427883..132427951,+!p2@PRRX2!1.90!77.54!PRRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.84!87.96!PRRX2;;chr1:170632285..170632309,+!p1@PRRX1!1.79!68.35!PRRX1;;chr1:170633348..170633399,+!p2@PRRX1!1.78!79.99!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.59!100.53!OSR1;;chr10:28034739..28034756,-!p1@MKX!1.56!35.55!MKX;;chr1:170633262..170633285,+!p3@PRRX1!1.46!31.87!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.43!128.42!CREB3L1;;chr7:19157248..19157268,-!p1@TWIST1!1.43!70.49!TWIST1;;chr6:1389789..1389821,+!p1@FOXF2!1.41!33.71!FOXF2;;chr14:61116183..61116208,-!p1@SIX1!1.40!89.19!SIX1;;chr5:72744594..72744609,-!p1@FOXD1!1.37!99.00!FOXD1;;chr6:45296048..45296082,+!p1@RUNX2!1.35!24.21!RUNX2;;chr4:4861385..4861398,+!p1@MSX1!1.29!54.55!MSX1;;chr2:200322654..200322707,-!p2@SATB2!1.26!25.13!SATB2;;chr16:86544113..86544145,+!p1@FOXF1!1.26!21.45!FOXF1;;chr15:57511609..57511651,+!p2@TCF12!1.24!27.28!TCF12;;chr11:46299539..46299620,+!p2@CREB3L1!1.22!26.36!CREB3L1;;chr5:321810..321877,+!p1@AHRR!1.21!47.81!AHRR;;chr1:170632959..170632987,+!p4@PRRX1!1.20!16.24!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!1.20!15.02!PRRX1;;chr2:239756671..239756732,+!p1@TWIST2!1.18!45.36!TWIST2;;chr1:75602043..75602093,+!p1@LHX8!1.15!13.18!LHX8;;chr20:55204351..55204377,+!p1@TFAP2C!1.14!16.24!TFAP2C;;chr1:75600067..75600094,+!p2@LHX8!1.14!12.87!LHX8;;chr16:86600426..86600441,+!p1@FOXC2!1.12!30.04!FOXC2;;chr11:65686802..65686818,+!p6@DRAP1!1.10!20.23!DRAP1;;chr12:80085061..80085119,-!p6@PAWR!1.05!16.24!PAWR;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.05!11.03!GLIS1;;chr1:170632477..170632506,+!p6@PRRX1!1.02!9.50!PRRX1;;chr8:60031934..60031986,-!p6@TOX!1.02!9.50!TOX;;chr11:65686732..65686756,+!p2@DRAP1!1.00!38.62!DRAP1;;chr7:19157043..19157088,-!p2@TWIST1!0.99!22.37!TWIST1;;chr10:131762504..131762555,-!p1@EBF3!0.98!8.58!EBF3;;chr11:65687362..65687436,+!p3@DRAP1!0.97!38.62!DRAP1;;chr11:65687222..65687240,+!p7@DRAP1!0.97!10.73!DRAP1;;chr2:239756739..239756755,+!p2@TWIST2!0.96!14.10!TWIST2;;chr14:24837368..24837401,+!p1@NFATC4!0.95!19.00!NFATC4;;chr14:37131058..37131139,+!p1@PAX9!0.95!7.97!PAX9;;chr2:172950227..172950249,+!p2@DLX1!0.95!7.97!DLX1;;chr19:47523058..47523114,+!p1@NPAS1!0.94!7.66!NPAS1;;chr13:45151259..45151326,-!p2@TSC22D1!0.92!45.67!TSC22D1;;chr1:170632647..170632659,+!p17@PRRX1!0.92!7.36!PRRX1;;chr2:172949484..172949522,+!p1@DLX1!0.92!7.36!DLX1;;chr10:28035133..28035148,-!p3@MKX!0.91!7.05!MKX;;chr13:45150455..45150472,-!p8@TSC22D1!0.89!6.74!TSC22D1;;chr16:54320617..54320643,-!p3@IRX3!0.88!8.58!IRX3;;chr11:65687158..65687216,+!p4@DRAP1!0.87!38.62!DRAP1;;chr17:59477233..59477263,+!p1@TBX2!0.87!20.84!TBX2;;chr1:170632250..170632277,+!p7@PRRX1!0.87!6.44!PRRX1;;chrY:21906594..21906622,-!p1@KDM5D!0.87!6.44!KDM5D;;chr7:44143925..44143970,+!p1@AEBP1!0.86!148.65!AEBP1;;chr11:65687243..65687276,+!p8@DRAP1!0.86!8.58!DRAP1;;chr5:72744445..72744466,-!p2@FOXD1!0.85!10.42!FOXD1;;chr5:139492456..139492489,+!p7@PURA!0.85!6.13!PURA;;chr12:53614115..53614154,-!p1@RARG!0.84!33.41!RARG;;chr5:72743793..72743855,-!p4@FOXD1!0.84!7.05!FOXD1;;chr9:96717629..96717644,-!p1@BARX1!0.83!5.82!BARX1;;chr1:170632310..170632321,+!p15@PRRX1!0.83!5.82!PRRX1;;chr15:42749722..42749739,-!p2@ZFP106!0.81!10.11!ZFP106;;chr8:60031682..60031710,-!p2@TOX!0.81!9.19!TOX;;chr6:1389824..1389840,+!p3@FOXF2!0.81!5.52!FOXF2;;chr2:172967242..172967265,-!p2@DLX2!0.81!5.52!DLX2;;chr2:172967276..172967296,-!p3@DLX2!0.81!5.52!DLX2;;chrY:2803415..2803468,+!p1@ZFY!0.81!5.52!ZFY;;chr16:54320158..54320200,-!p5@IRX3!0.80!7.97!IRX3;;chr14:61116168..61116180,-!p2@SIX1!0.80!6.13!SIX1;;chr11:12696071..12696086,+!p3@TEAD1!0.79!7.05!TEAD1;;chr16:31076332..31076388,-!p3@ZNF668!0.79!5.21!ZNF668;;chr5:72744562..72744573,-!p3@FOXD1!0.78!6.44!FOXD1;;chr6:19837592..19837621,+!p1@ID4!0.77!32.49!ID4;;chr7:96654026..96654061,-!p2@DLX5!0.77!4.90!DLX5;;chr7:96654133..96654150,-!p1@DLX5!0.77!4.90!DLX5;;chr1:170632137..170632172,+!p10@PRRX1!0.77!4.90!PRRX1;;chr2:119604456..119604501,-!p2@EN1!0.77!4.90!EN1;;chr2:119605214..119605230,-!p1@EN1!0.77!4.90!EN1;;chr16:54320646..54320672,-!p2@IRX3!0.75!7.36!IRX3;;chr2:45236540..45236577,-!p1@SIX2!0.75!4.60!SIX2;;chr12:66218598..66218645,+!p2@HMGA2!0.73!22.07!HMGA2;;chr19:47922750..47922795,-!p1@MEIS3!0.72!7.36!MEIS3;;chr16:54319010..54319041,-!p8@IRX3!0.72!4.29!IRX3;;chr7:1577899..1577943,+!p3@MAFK!0.72!4.29!MAFK;;chr12:53625846..53625861,-!p6@RARG!0.72!4.29!RARG;;chr2:172967323..172967336,-!p4@DLX2!0.72!4.29!DLX2;;chr10:63853436..63853442,+!p4@ARID5B!0.71!24.83!ARID5B;;chr10:63809013..63809041,+!p3@ARID5B!0.70!25.44!ARID5B;;chr11:65686776..65686787,+!p9@DRAP1!0.70!4.90!DRAP1;;chr10:28032421..28032494,-!p2@MKX!0.70!3.98!MKX;;chr1:170633245..170633256,+!p14@PRRX1!0.70!3.98!PRRX1;;chr3:37217736..37217753,-!p2@LRRFIP2!0.69!18.39!LRRFIP2;;chr11:65667884..65667895,-!p2@FOSL1!0.69!16.86!FOSL1;;chr16:54320101..54320125,-!p4@IRX3!0.69!5.82!IRX3;;chr12:80084279..80084293,-!p8@PAWR!0.68!6.74!PAWR;;chr10:63809106..63809127,+!p1@ARID5B!0.67!57.93!ARID5B;;chr2:172967621..172967637,-!p1@DLX2!0.67!11.03!DLX2;;chr5:139487608..139487663,+!p3@PURA!0.67!8.58!PURA;;chr14:37132241..37132304,+!p3@PAX9!0.67!3.68!PAX9;;chr16:54320322..54320343,-!p7@IRX3!0.67!3.68!IRX3;;chr11:65686952..65686975,+!p5@DRAP1!0.66!22.37!DRAP1;;chr1:200379104..200379128,-!p2@ZNF281!0.64!9.19!ZNF281;;chr5:174151553..174151610,+!p1@MSX2!0.64!6.13!MSX2;;chr6:1389989..1390019,+!p2@FOXF2!0.64!3.37!FOXF2;;chr8:93074803..93074845,-!p1@RUNX1T1!0.64!3.37!RUNX1T1;;chr1:170632439..170632465,+!p11@PRRX1!0.64!3.37!PRRX1;;chr16:86600870..86600921,+!p2@FOXC2!0.64!3.37!FOXC2;;chr2:45236579..45236596,-!p2@SIX2!0.64!3.37!SIX2;;chr6:45390025..45390076,+!p2@RUNX2!0.63!8.89!RUNX2;;chr8:72756667..72756736,-!p2@MSC!0.63!5.52!MSC;;chr12:66218255..66218304,+!p3@HMGA2!0.62!9.81!HMGA2;;chr2:200323414..200323455,-!p1@SATB2!0.62!7.66!SATB2;;chr5:134369905..134369972,-!p1@PITX1!0.62!5.21!PITX1;;chr7:44143997..44144008,+!p3@AEBP1!0.62!4.29!AEBP1;;chr7:17369649..17369664,+!p4@AHR!0.62!3.98!AHR;;chr14:73360799..73360817,-!p1@DPF3!0.61!12.26!DPF3;;chr5:158526459..158526481,-!p2@EBF1!0.61!4.29!EBF1;;chr12:80085120..80085156,-!p14@PAWR!0.61!3.06!PAWR;;chr1:170632115..170632136,+!p9@PRRX1!0.61!3.06!PRRX1;;chr2:102091566..102091581,-!p1@RFX8!0.61!3.06!RFX8;;chr16:54964740..54964789,+!p1@IRX5!0.60!4.60!IRX5;;chr2:46602901..46602926,+!p7@EPAS1!0.60!4.29!EPAS1;;chr14:75894714..75894733,+!p1@JDP2!0.59!99.61!JDP2;;chr11:65687882..65687902,+!p10@DRAP1!0.59!4.29!DRAP1;;chr3:37216069..37216075,-!p4@LRRFIP2!0.59!3.98!LRRFIP2;;chr6:34204921..34204939,+!p3@HMGA1!0.58!105.43!HMGA1;;chr2:145275162..145275202,-!p2@ZEB2!0.58!19.92!ZEB2;;chr5:158526917..158526932,-!p1@EBF1!0.58!7.97!EBF1;;chr19:13134457..13134462,+!p5@NFIX!0.58!5.52!NFIX;;chr6:28321909..28321965,-!p3@ZNF323!0.58!2.76!ZNF323;;chrY:21906761..21906810,-!p2@KDM5D!0.58!2.76!KDM5D;;chr1:40105299..40105326,-!p1@HEYL!0.58!2.76!HEYL;;chr7:44143978..44143989,+!p2@AEBP1!0.57!5.52!AEBP1;;chr6:1312325..1312340,+!p1@FOXQ1!0.57!4.90!FOXQ1;;chr5:176738887..176738934,-!p1@MXD3!0.56!21.76!MXD3;;chr13:74708475..74708499,-!p5@KLF12!0.56!7.05!KLF12;;chr8:49833978..49833996,-!p1@SNAI2!0.55!66.81!SNAI2;;chr8:49833948..49833973,-!p2@SNAI2!0.55!19.92!SNAI2;;chr12:53625966..53626012,-!p2@RARG!0.55!7.97!RARG;;chr19:13136241..13136258,+!p7@NFIX!0.55!3.68!NFIX;;chr2:191878874..191878938,-!p1@STAT1!0.54!170.10!STAT1;;chr3:178789522..178789564,-!p2@ZMAT3!0.54!22.99!ZMAT3;;chr12:66218212..66218244,+!p5@HMGA2!0.54!3.98!HMGA2;;chr8:72756267..72756296,-!p4@MSC!0.54!3.98!MSC;;chr8:25902876..25902936,-!p1@EBF2!0.54!2.45!EBF2;;chr2:46612891..46612907,+!p10@EPAS1!0.54!2.45!EPAS1;;chr1:170632723..170632739,+!p8@PRRX1!0.54!2.45!PRRX1;;chr20:30433396..30433414,-!p1@FOXS1!0.54!2.45!FOXS1;;chr10:28034772..28034783,-!p4@MKX!0.54!2.45!MKX;;chr10:28035112..28035130,-!p5@MKX!0.54!2.45!MKX;;chr11:46333934..46333963,+!p5@CREB3L1!0.54!2.45!CREB3L1;;chr11:46333979..46333991,+!p7@CREB3L1!0.54!2.45!CREB3L1;;chr17:59477197..59477212,+!p2@TBX2!0.52!4.60!TBX2;;chr12:80085255..80085284,-!p9@PAWR!0.52!3.68!PAWR;;chr10:63809077..63809089,+!p5@ARID5B!0.51!5.82!ARID5B;;chr17:20492136..20492165,+!p1@MEIS3P2!0.51!3.98!MEIS3P2;;chr17:46127997..46128015,+!p5@NFE2L1!0.51!3.37!NFE2L1;;chr2:191878812..191878823,-!p2@STAT1!0.51!3.06!STAT1;;chr3:150126759..150126784,+!p2@TSC22D2!0.50!12.57!TSC22D2;;chr3:141121847..141121868,+!p5@ZBTB38!0.50!3.68!ZBTB38;;chr16:86601052..86601066,+!p4@FOXC2!0.50!2.15!FOXC2;;chr5:174151612..174151633,+!p2@MSX2!0.50!2.15!MSX2;;chr6:1389871..1389876,+!p4@FOXF2!0.50!2.15!FOXF2;;chr6:45296028..45296034,+!p24@RUNX2!0.50!2.15!RUNX2;;chr8:93074848..93074871,-!p3@RUNX1T1!0.50!2.15!RUNX1T1;;chr11:46299443..46299459,+!p4@CREB3L1!0.50!2.15!CREB3L1;;chr1:170632683..170632696,+!p12@PRRX1!0.50!2.15!PRRX1;;chr1:170633294..170633303,+!p23@PRRX1!0.50!2.15!PRRX1;;chr9:96717678..96717689,-!p2@BARX1!0.50!2.15!BARX1;;chr12:48298785..48298828,-!p1@VDR!0.49!14.40!VDR;;chr3:52001426..52001447,-!p3@PCBP4!0.49!7.36!PCBP4;;chr8:60031762..60031803,-!p3@TOX!0.49!3.37!TOX;;chr17:59477275..59477286,+!p3@TBX2!0.49!3.06!TBX2;;chr2:46524537..46524553,+!p1@EPAS1!0.48!271.55!EPAS1;;chr12:80084303..80084332,-!p1@PAWR!0.48!15.63!PAWR;;chr3:141087393..141087426,+!p3@ZBTB38!0.48!10.42!ZBTB38;;chr16:54320675..54320715,-!p1@IRX3!0.48!5.21!IRX3;;chr8:60031809..60031835,-!p4@TOX!0.48!2.76!TOX;;chr10:31607702..31607755,+!p3@ZEB1!0.48!2.45!ZEB1;;chr12:80084737..80084763,-!p3@PAWR!0.47!9.50!PAWR;;chr12:53614155..53614187,-!p3@RARG!0.47!4.60!RARG;;chr11:12696002..12696022,+!p2@TEAD1!0.46!5.82!TEAD1;;chr3:52001448..52001478,-!p2@PCBP4!0.45!34.94!PCBP4;;chr13:45151403..45151433,-!p5@TSC22D1!0.45!4.90!TSC22D1;;chr12:48298765..48298783,-!p2@VDR!0.45!4.60!VDR;;chr12:53848549..53848582,+!p9@PCBP2!0.45!3.06!PCBP2;;chr13:74708246..74708264,-!p8@KLF12!0.45!2.15!KLF12;;chr8:72756637..72756664,-!p3@MSC!0.45!2.15!MSC;;chr10:28032548..28032559,-!p7@MKX!0.45!1.84!MKX;;chr10:28035155..28035166,-!p8@MKX!0.45!1.84!MKX;;chr15:57511589..57511608,+!p4@TCF12!0.45!1.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IS2;;chr22:30163056..30163067,-!p3@ZMAT5!0.25!1.23!ZMAT5;;chr19:56152361..56152434,+!p1@ZNF580!0.24!41.07!ZNF580;;chr2:208030647..208030689,-!p1@KLF7!0.24!12.57!KLF7;;chr10:44144292..44144338,-!p1@ZNF32!0.24!9.50!ZNF32;;chr8:124286775..124286860,-!p2@ZHX1!0.24!6.13!ZHX1;;chr5:137804484..137804498,+!p2@EGR1!0.24!5.52!EGR1;;chr16:79634624..79634642,-!p1@MAF!0.24!5.52!MAF;;chr12:108154925..108154945,-!p2@PRDM4!0.24!3.06!PRDM4;;chr12:53848505..53848532,+!p4@PCBP2!0.24!2.76!PCBP2;;chr15:61521417..61521460,-!p2@RORA!0.24!2.76!RORA;;chr17:7382834..7382855,-!p6@ZBTB4!0.24!1.84!ZBTB4;;chr4:81104895..81104920,+!p2@PRDM8!0.24!1.53!PRDM8;;chr21:36231861..36231877,-!p12@RUNX1!0.24!1.23!RUNX1;;chr8:72756213..72756243,-!p5@MSC!0.24!1.23!MSC;;chr11:46299186..46299195,+!p3@CREB3L1!0.24!0.92!CREB3L1;;chr18:46475696..46475713,-!p1@SMAD7!0.24!0.92!SMAD7;;chr8:48650715..48650735,-!p1@CEBPD!0.23!197.99!CEBPD;;chr3:150126065..150126097,+!p1@TSC22D2!0.23!12.87!TSC22D2;;chr16:29819403..29819442,+!p5@MAZ!0.23!11.95!MAZ;;chr16:71496112..71496160,-!p1@ZNF23!0.23!6.44!ZNF23;;chr17:5095126..5095169,-!p1@ZNF594!0.23!5.82!ZNF594;;chr9:137218341..137218361,+!p2@RXRA!0.23!5.52!RXRA;;chr1:67395982..67396015,+!p4@MIER1!0.23!3.37!MIER1;;chr6:144289132..144289134,-!p3@PLAGL1!0.23!2.76!PLAGL1;;chr11:8102749..8102769,+!p2@TUB!0.23!2.15!TUB;;chr12:52430894..52430952,+!p3@NR4A1!0.23!2.15!NR4A1;;chr1:221053049..221053075,+!p3@HLX!0.23!1.84!HLX;;chr18:32924431..32924440,-!p2@ZNF24!0.23!1.84!ZNF24;;chr7:137686763..137686784,-!p5@CREB3L2!0.23!1.84!CREB3L2;;chr10:3819310..3819325,-!p5@KLF6!0.23!1.23!KLF6;;chr9:2017159..2017186,+!p12@SMARCA2!0.23!1.23!SMARCA2;;chr9:4300004..4300015,-!p6@GLIS3!0.23!0.92!GLIS3;;chr7:44143738..44143760,+!p4@AEBP1!0.23!0.92!AEBP1;;chr1:47903709..47903764,+!p1@BC169308!0.23!0.92!FOXD2;;chr12:80083689..80083706,-!p16@PAWR!0.23!0.92!PAWR;;chr19:20844356..20844365,-!p3@ZNF626!0.23!0.92!ZNF626;;chr22:30162924..30163005,-!p1@ZMAT5!0.22!18.08!ZMAT5;;chr10:3827371..3827386,-!p2@KLF6!0.22!11.95!KLF6;;chr22:41697497..41697515,+!p2@ZC3H7B!0.22!3.37!ZC3H7B;;chr22:42229210..42229229,+!p3@SREBF2!0.22!2.76!SREBF2;;chr3:23986748..23986761,+!p3@NR1D2!0.22!2.45!NR1D2;;chr3:40566371..40566400,+!p2@ZNF621!0.22!2.45!ZNF621;;chr9:130952713..130952727,-!p3@CIZ1!0.22!1.53!CIZ1;;chr12:66218378..66218401,+!p6@HMGA2!0.22!1.53!HMGA2;;chr20:50721803..50721857,-!p2@ZFP64!0.22!1.53!ZFP64;;chr1:244219775..244219893,+!p2@ZNF238!0.22!1.23!ZNF238;;chr4:87967906..87967931,+!p15@AFF1!0.22!1.23!AFF1;;chr11:6947647..6947698,+!p2@ZNF215!0.22!1.23!ZNF215;;chr12:11802909..11802920,+!p7@ETV6!0.22!1.23!ETV6;;chr13:74708269..74708291,-!p7@KLF12!0.22!1.23!KLF12;;chr11:19263160..19263176,-!p1@E2F8!0.22!0.92!E2F8;;chr11:47237922..47237964,+!p4@DDB2!0.22!0.92!DDB2;;chr1:23857325..23857416,-!p2@E2F2!0.22!0.92!E2F2;;chr19:12175573..12175584,+!p3@ZNF844!0.22!0.92!ZNF844;;chrX:47509928..47509990,-!p1@ELK1!0.21!44.75!ELK1;;chr2:70314849..70314860,+!p3@PCBP1!0.21!21.45!PCBP1;;chr5:132299210..132299228,-!p3@AFF4!0.21!16.55!AFF4;;chr12:124873357..124873401,-!p1@NCOR2!0.21!16.24!NCOR2;;chr2:217277169..217277266,+!p1@SMARCAL1!0.21!14.71!SMARCAL1;;chr12:498695..498748,-!p2@KDM5A!0.21!8.89!KDM5A;;chr19:56152437..56152467,+!p3@ZNF580!0.21!6.74!ZNF580;;chr13:41635285..41635356,-!p3@ELF1!0.21!5.21!ELF1;;chr2:208394817..208394834,+!p3@CREB1!0.21!5.21!CREB1;;chr2:217277480..217277505,+!p2@SMARCAL1!0.21!4.29!SMARCAL1;;chr22:46546406..46546440,+!p1@PPARA!0.21!2.76!PPARA;;chr19:58951496..58951539,-!p1@ZNF132!0.21!2.76!ZNF132;;chr15:66994561..66994597,+!p2@SMAD6!0.21!2.76!SMAD6;;chr1:158979851..158979865,+!p5@IFI16!0.21!2.45!IFI16;;chr3:114343826..114343869,-!p4@ZBTB20!0.21!2.15!ZBTB20;;chr7:148823387..148823440,-!p1@ZNF425!0.21!1.84!ZNF425;;chr8:28243813..28243839,-!p4@ZNF395!0.21!1.84!ZNF395;;chr12:56575310..56575344,-!p3@SMARCC2!0.21!1.53!SMARCC2;;chr1:43148244..43148275,+!p5@YBX1!0.21!1.53!YBX1;;chr21:36260295..36260310,-!p3@RUNX1!0.21!1.53!RUNX1;;chr21:36260343..36260402,-!p6@RUNX1!0.21!1.53!RUNX1;;chr10:77161650..77161661,-!p4@ZNF503!0.21!1.23!ZNF503;;chr12:12764995..12765017,+!p3@CREBL2!0.21!1.23!CREBL2;;chr14:62213827..62213853,+!p6@HIF1A!0.21!1.23!HIF1A;;chr3:23986876..23986885,+!p4@NR1D2!0.21!1.23!NR1D2;;chr22:39916289..39916302,+!p3@ATF4!0.21!0.92!ATF4;;chr8:28243785..28243799,-!p6@ZNF395!0.21!0.92!ZNF395;;chr16:69600181..69600202,+!p5@NFAT5!0.21!0.92!NFAT5;;chr15:31684663..31684717,+!p10@KLF13!0.21!0.61!KLF13;;chr15:67430351..67430366,+!p10@SMAD3!0.21!0.61!SMAD3;;chr15:67430381..67430396,+!p21@SMAD3!0.21!0.61!SMAD3;;chr15:80843484..80843499,+!p5@ARNT2!0.21!0.61!ARNT2;;chr16:54964690..54964703,+!p4@IRX5!0.21!0.61!IRX5;;chr16:54964899..54964914,+!p2@IRX5!0.21!0.61!IRX5;;chr16:79633883..79633892,-!p6@MAF!0.21!0.61!MAF;;chr16:86612320..86612394,+!p1@FOXL1!0.21!0.61!FOXL1;;chr17:7387486..7387497,-!p11@ZBTB4!0.21!0.61!ZBTB4;;chr17:79881433..79881452,-!p6@MAFG!0.21!0.61!MAFG;;chr18:32870122..32870133,-!p2@ZSCAN30!0.21!0.61!ZSCAN30;;chr18:42260840..42260860,+!p2@SETBP1!0.21!0.61!SETBP1;;ch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| |expression_enrichment_score=chr9:132427883..132427951,+!p2@PRRX2!1.90!77.54!PRRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.84!87.96!PRRX2;;chr1:170632285..170632309,+!p1@PRRX1!1.79!68.35!PRRX1;;chr1:170633348..170633399,+!p2@PRRX1!1.78!79.99!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.59!100.53!OSR1;;chr10:28034739..28034756,-!p1@MKX!1.56!35.55!MKX;;chr1:170633262..170633285,+!p3@PRRX1!1.46!31.87!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.43!128.42!CREB3L1;;chr7:19157248..19157268,-!p1@TWIST1!1.43!70.49!TWIST1;;chr6:1389789..1389821,+!p1@FOXF2!1.41!33.71!FOXF2;;chr14:61116183..61116208,-!p1@SIX1!1.40!89.19!SIX1;;chr5:72744594..72744609,-!p1@FOXD1!1.37!99.00!FOXD1;;chr6:45296048..45296082,+!p1@RUNX2!1.35!24.21!RUNX2;;chr4:4861385..4861398,+!p1@MSX1!1.29!54.55!MSX1;;chr2:200322654..200322707,-!p2@SATB2!1.26!25.13!SATB2;;chr16:86544113..86544145,+!p1@FOXF1!1.26!21.45!FOXF1;;chr15:57511609..57511651,+!p2@TCF12!1.24!27.28!TCF12;;chr11:46299539..46299620,+!p2@CREB3L1!1.22!26.36!CREB3L1;;chr5:321810..321877,+!p1@AHRR!1.21!47.81!AHRR;;chr1:170632959..170632987,+!p4@PRRX1!1.20!16.24!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!1.20!15.02!PRRX1;;chr2:239756671..239756732,+!p1@TWIST2!1.18!45.36!TWIST2;;chr1:75602043..75602093,+!p1@LHX8!1.15!13.18!LHX8;;chr20:55204351..55204377,+!p1@TFAP2C!1.14!16.24!TFAP2C;;chr1:75600067..75600094,+!p2@LHX8!1.14!12.87!LHX8;;chr16:86600426..86600441,+!p1@FOXC2!1.12!30.04!FOXC2;;chr11:65686802..65686818,+!p6@DRAP1!1.10!20.23!DRAP1;;chr12:80085061..80085119,-!p6@PAWR!1.05!16.24!PAWR;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.05!11.03!GLIS1;;chr1:170632477..170632506,+!p6@PRRX1!1.02!9.50!PRRX1;;chr8:60031934..60031986,-!p6@TOX!1.02!9.50!TOX;;chr11:65686732..65686756,+!p2@DRAP1!1.00!38.62!DRAP1;;chr7:19157043..19157088,-!p2@TWIST1!0.99!22.37!TWIST1;;chr10:131762504..131762555,-!p1@EBF3!0.98!8.58!EBF3;;chr11:65687362..65687436,+!p3@DRAP1!0.97!38.62!DRAP1;;chr11:65687222..65687240,+!p7@DRAP1!0.97!10.73!DRAP1;;chr2:239756739..239756755,+!p2@TWIST2!0.96!14.10!TWIST2;;chr14:24837368..24837401,+!p1@NFATC4!0.95!19.00!NFATC4;;chr14:37131058..37131139,+!p1@PAX9!0.95!7.97!PAX9;;chr2:172950227..172950249,+!p2@DLX1!0.95!7.97!DLX1;;chr19:47523058..47523114,+!p1@NPAS1!0.94!7.66!NPAS1;;chr13:45151259..45151326,-!p2@TSC22D1!0.92!45.67!TSC22D1;;chr1:170632647..170632659,+!p17@PRRX1!0.92!7.36!PRRX1;;chr2:172949484..172949522,+!p1@DLX1!0.92!7.36!DLX1;;chr10:28035133..28035148,-!p3@MKX!0.91!7.05!MKX;;chr13:45150455..45150472,-!p8@TSC22D1!0.89!6.74!TSC22D1;;chr16:54320617..54320643,-!p3@IRX3!0.88!8.58!IRX3;;chr11:65687158..65687216,+!p4@DRAP1!0.87!38.62!DRAP1;;chr17:59477233..59477263,+!p1@TBX2!0.87!20.84!TBX2;;chr1:170632250..170632277,+!p7@PRRX1!0.87!6.44!PRRX1;;chrY:21906594..21906622,-!p1@KDM5D!0.87!6.44!KDM5D;;chr7:44143925..44143970,+!p1@AEBP1!0.86!148.65!AEBP1;;chr11:65687243..65687276,+!p8@DRAP1!0.86!8.58!DRAP1;;chr5:72744445..72744466,-!p2@FOXD1!0.85!10.42!FOXD1;;chr5:139492456..139492489,+!p7@PURA!0.85!6.13!PURA;;chr12:53614115..53614154,-!p1@RARG!0.84!33.41!RARG;;chr5:72743793..72743855,-!p4@FOXD1!0.84!7.05!FOXD1;;chr9:96717629..96717644,-!p1@BARX1!0.83!5.82!BARX1;;chr1:170632310..170632321,+!p15@PRRX1!0.83!5.82!PRRX1;;chr15:42749722..42749739,-!p2@ZFP106!0.81!10.11!ZFP106;;chr8:60031682..60031710,-!p2@TOX!0.81!9.19!TOX;;chr6:1389824..1389840,+!p3@FOXF2!0.81!5.52!FOXF2;;chr2:172967242..172967265,-!p2@DLX2!0.81!5.52!DLX2;;chr2:172967276..172967296,-!p3@DLX2!0.81!5.52!DLX2;;chrY:2803415..2803468,+!p1@ZFY!0.81!5.52!ZFY;;chr16:54320158..54320200,-!p5@IRX3!0.80!7.97!IRX3;;chr14:61116168..61116180,-!p2@SIX1!0.80!6.13!SIX1;;chr11:12696071..12696086,+!p3@TEAD1!0.79!7.05!TEAD1;;chr16:31076332..31076388,-!p3@ZNF668!0.79!5.21!ZNF668;;chr5:72744562..72744573,-!p3@FOXD1!0.78!6.44!FOXD1;;chr6:19837592..19837621,+!p1@ID4!0.77!32.49!ID4;;chr7:96654026..96654061,-!p2@DLX5!0.77!4.90!DLX5;;chr7:96654133..96654150,-!p1@DLX5!0.77!4.90!DLX5;;chr1:170632137..170632172,+!p10@PRRX1!0.77!4.90!PRRX1;;chr2:119604456..119604501,-!p2@EN1!0.77!4.90!EN1;;chr2:119605214..119605230,-!p1@EN1!0.77!4.90!EN1;;chr16:54320646..54320672,-!p2@IRX3!0.75!7.36!IRX3;;chr2:45236540..45236577,-!p1@SIX2!0.75!4.60!SIX2;;chr12:66218598..66218645,+!p2@HMGA2!0.73!22.07!HMGA2;;chr19:47922750..47922795,-!p1@MEIS3!0.72!7.36!MEIS3;;chr16:54319010..54319041,-!p8@IRX3!0.72!4.29!IRX3;;chr7:1577899..1577943,+!p3@MAFK!0.72!4.29!MAFK;;chr12:53625846..53625861,-!p6@RARG!0.72!4.29!RARG;;chr2:172967323..172967336,-!p4@DLX2!0.72!4.29!DLX2;;chr10:63853436..63853442,+!p4@ARID5B!0.71!24.83!ARID5B;;chr10:63809013..63809041,+!p3@ARID5B!0.70!25.44!ARID5B;;chr11:65686776..65686787,+!p9@DRAP1!0.70!4.90!DRAP1;;chr10:28032421..28032494,-!p2@MKX!0.70!3.98!MKX;;chr1:170633245..170633256,+!p14@PRRX1!0.70!3.98!PRRX1;;chr3:37217736..37217753,-!p2@LRRFIP2!0.69!18.39!LRRFIP2;;chr11:65667884..65667895,-!p2@FOSL1!0.69!16.86!FOSL1;;chr16:54320101..54320125,-!p4@IRX3!0.69!5.82!IRX3;;chr12:80084279..80084293,-!p8@PAWR!0.68!6.74!PAWR;;chr10:63809106..63809127,+!p1@ARID5B!0.67!57.93!ARID5B;;chr2:172967621..172967637,-!p1@DLX2!0.67!11.03!DLX2;;chr5:139487608..139487663,+!p3@PURA!0.67!8.58!PURA;;chr14:37132241..37132304,+!p3@PAX9!0.67!3.68!PAX9;;chr16:54320322..54320343,-!p7@IRX3!0.67!3.68!IRX3;;chr11:65686952..65686975,+!p5@DRAP1!0.66!22.37!DRAP1;;chr1:200379104..200379128,-!p2@ZNF281!0.64!9.19!ZNF281;;chr5:174151553..174151610,+!p1@MSX2!0.64!6.13!MSX2;;chr6:1389989..1390019,+!p2@FOXF2!0.64!3.37!FOXF2;;chr8:93074803..93074845,-!p1@RUNX1T1!0.64!3.37!RUNX1T1;;chr1:170632439..170632465,+!p11@PRRX1!0.64!3.37!PRRX1;;chr16:86600870..86600921,+!p2@FOXC2!0.64!3.37!FOXC2;;chr2:45236579..45236596,-!p2@SIX2!0.64!3.37!SIX2;;chr6:45390025..45390076,+!p2@RUNX2!0.63!8.89!RUNX2;;chr8:72756667..72756736,-!p2@MSC!0.63!5.52!MSC;;chr12:66218255..66218304,+!p3@HMGA2!0.62!9.81!HMGA2;;chr2:200323414..200323455,-!p1@SATB2!0.62!7.66!SATB2;;chr5:134369905..134369972,-!p1@PITX1!0.62!5.21!PITX1;;chr7:44143997..44144008,+!p3@AEBP1!0.62!4.29!AEBP1;;chr7:17369649..17369664,+!p4@AHR!0.62!3.98!AHR;;chr14:73360799..73360817,-!p1@DPF3!0.61!12.26!DPF3;;chr5:158526459..158526481,-!p2@EBF1!0.61!4.29!EBF1;;chr12:80085120..80085156,-!p14@PAWR!0.61!3.06!PAWR;;chr1:170632115..170632136,+!p9@PRRX1!0.61!3.06!PRRX1;;chr2:102091566..102091581,-!p1@RFX8!0.61!3.06!RFX8;;chr16:54964740..54964789,+!p1@IRX5!0.60!4.60!IRX5;;chr2:46602901..46602926,+!p7@EPAS1!0.60!4.29!EPAS1;;chr14:75894714..75894733,+!p1@JDP2!0.59!99.61!JDP2;;chr11:65687882..65687902,+!p10@DRAP1!0.59!4.29!DRAP1;;chr3:37216069..37216075,-!p4@LRRFIP2!0.59!3.98!LRRFIP2;;chr6:34204921..34204939,+!p3@HMGA1!0.58!105.43!HMGA1;;chr2:145275162..145275202,-!p2@ZEB2!0.58!19.92!ZEB2;;chr5:158526917..158526932,-!p1@EBF1!0.58!7.97!EBF1;;chr19:13134457..13134462,+!p5@NFIX!0.58!5.52!NFIX;;chr6:28321909..28321965,-!p3@ZNF323!0.58!2.76!ZNF323;;chrY:21906761..21906810,-!p2@KDM5D!0.58!2.76!KDM5D;;chr1:40105299..40105326,-!p1@HEYL!0.58!2.76!HEYL;;chr7:44143978..44143989,+!p2@AEBP1!0.57!5.52!AEBP1;;chr6:1312325..1312340,+!p1@FOXQ1!0.57!4.90!FOXQ1;;chr5:176738887..176738934,-!p1@MXD3!0.56!21.76!MXD3;;chr13:74708475..74708499,-!p5@KLF12!0.56!7.05!KLF12;;chr8:49833978..49833996,-!p1@SNAI2!0.55!66.81!SNAI2;;chr8:49833948..49833973,-!p2@SNAI2!0.55!19.92!SNAI2;;chr12:53625966..53626012,-!p2@RARG!0.55!7.97!RARG;;chr19:13136241..13136258,+!p7@NFIX!0.55!3.68!NFIX;;chr2:191878874..191878938,-!p1@STAT1!0.54!170.10!STAT1;;chr3:178789522..178789564,-!p2@ZMAT3!0.54!22.99!ZMAT3;;chr12:66218212..66218244,+!p5@HMGA2!0.54!3.98!HMGA2;;chr8:72756267..72756296,-!p4@MSC!0.54!3.98!MSC;;chr8:25902876..25902936,-!p1@EBF2!0.54!2.45!EBF2;;chr2:46612891..46612907,+!p10@EPAS1!0.54!2.45!EPAS1;;chr1:170632723..170632739,+!p8@PRRX1!0.54!2.45!PRRX1;;chr20:30433396..30433414,-!p1@FOXS1!0.54!2.45!FOXS1;;chr10:28034772..28034783,-!p4@MKX!0.54!2.45!MKX;;chr10:28035112..28035130,-!p5@MKX!0.54!2.45!MKX;;chr11:46333934..46333963,+!p5@CREB3L1!0.54!2.45!CREB3L1;;chr11:46333979..46333991,+!p7@CREB3L1!0.54!2.45!CREB3L1;;chr17:59477197..59477212,+!p2@TBX2!0.52!4.60!TBX2;;chr12:80085255..80085284,-!p9@PAWR!0.52!3.68!PAWR;;chr10:63809077..63809089,+!p5@ARID5B!0.51!5.82!ARID5B;;chr17:20492136..20492165,+!p1@MEIS3P2!0.51!3.98!MEIS3P2;;chr17:46127997..46128015,+!p5@NFE2L1!0.51!3.37!NFE2L1;;chr2:191878812..191878823,-!p2@STAT1!0.51!3.06!STAT1;;chr3:150126759..150126784,+!p2@TSC22D2!0.50!12.57!TSC22D2;;chr3:141121847..141121868,+!p5@ZBTB38!0.50!3.68!ZBTB38;;chr16:86601052..86601066,+!p4@FOXC2!0.50!2.15!FOXC2;;chr5:174151612..174151633,+!p2@MSX2!0.50!2.15!MSX2;;chr6:1389871..1389876,+!p4@FOXF2!0.50!2.15!FOXF2;;chr6:45296028..45296034,+!p24@RUNX2!0.50!2.15!RUNX2;;chr8:93074848..93074871,-!p3@RUNX1T1!0.50!2.15!RUNX1T1;;chr11:46299443..46299459,+!p4@CREB3L1!0.50!2.15!CREB3L1;;chr1:170632683..170632696,+!p12@PRRX1!0.50!2.15!PRRX1;;chr1:170633294..170633303,+!p23@PRRX1!0.50!2.15!PRRX1;;chr9:96717678..96717689,-!p2@BARX1!0.50!2.15!BARX1;;chr12:48298785..48298828,-!p1@VDR!0.49!14.40!VDR;;chr3:52001426..52001447,-!p3@PCBP4!0.49!7.36!PCBP4;;chr8:60031762..60031803,-!p3@TOX!0.49!3.37!TOX;;chr17:59477275..59477286,+!p3@TBX2!0.49!3.06!TBX2;;chr2:46524537..46524553,+!p1@EPAS1!0.48!271.55!EPAS1;;chr12:80084303..80084332,-!p1@PAWR!0.48!15.63!PAWR;;chr3:141087393..141087426,+!p3@ZBTB38!0.48!10.42!ZBTB38;;chr16:54320675..54320715,-!p1@IRX3!0.48!5.21!IRX3;;chr8:60031809..60031835,-!p4@TOX!0.48!2.76!TOX;;chr10:31607702..31607755,+!p3@ZEB1!0.48!2.45!ZEB1;;chr12:80084737..80084763,-!p3@PAWR!0.47!9.50!PAWR;;chr12:53614155..53614187,-!p3@RARG!0.47!4.60!RARG;;chr11:12696002..12696022,+!p2@TEAD1!0.46!5.82!TEAD1;;chr3:52001448..52001478,-!p2@PCBP4!0.45!34.94!PCBP4;;chr13:45151403..45151433,-!p5@TSC22D1!0.45!4.90!TSC22D1;;chr12:48298765..48298783,-!p2@VDR!0.45!4.60!VDR;;chr12:53848549..53848582,+!p9@PCBP2!0.45!3.06!PCBP2;;chr13:74708246..74708264,-!p8@KLF12!0.45!2.15!KLF12;;chr8:72756637..72756664,-!p3@MSC!0.45!2.15!MSC;;chr10:28032548..28032559,-!p7@MKX!0.45!1.84!MKX;;chr10:28035155..28035166,-!p8@MKX!0.45!1.84!MKX;;chr15:57511589..57511608,+!p4@TCF12!0.45!1.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IS2;;chr22:30163056..30163067,-!p3@ZMAT5!0.25!1.23!ZMAT5;;chr19:56152361..56152434,+!p1@ZNF580!0.24!41.07!ZNF580;;chr2:208030647..208030689,-!p1@KLF7!0.24!12.57!KLF7;;chr10:44144292..44144338,-!p1@ZNF32!0.24!9.50!ZNF32;;chr8:124286775..124286860,-!p2@ZHX1!0.24!6.13!ZHX1;;chr5:137804484..137804498,+!p2@EGR1!0.24!5.52!EGR1;;chr16:79634624..79634642,-!p1@MAF!0.24!5.52!MAF;;chr12:108154925..108154945,-!p2@PRDM4!0.24!3.06!PRDM4;;chr12:53848505..53848532,+!p4@PCBP2!0.24!2.76!PCBP2;;chr15:61521417..61521460,-!p2@RORA!0.24!2.76!RORA;;chr17:7382834..7382855,-!p6@ZBTB4!0.24!1.84!ZBTB4;;chr4:81104895..81104920,+!p2@PRDM8!0.24!1.53!PRDM8;;chr21:36231861..36231877,-!p12@RUNX1!0.24!1.23!RUNX1;;chr8:72756213..72756243,-!p5@MSC!0.24!1.23!MSC;;chr11:46299186..46299195,+!p3@CREB3L1!0.24!0.92!CREB3L1;;chr18:46475696..46475713,-!p1@SMAD7!0.24!0.92!SMAD7;;chr8:48650715..48650735,-!p1@CEBPD!0.23!197.99!CEBPD;;chr3:150126065..150126097,+!p1@TSC22D2!0.23!12.87!TSC22D2;;chr16:29819403..29819442,+!p5@MAZ!0.23!11.95!MAZ;;chr16:71496112..71496160,-!p1@ZNF23!0.23!6.44!ZNF23;;chr17:5095126..5095169,-!p1@ZNF594!0.23!5.82!ZNF594;;chr9:137218341..137218361,+!p2@RXRA!0.23!5.52!RXRA;;chr1:67395982..67396015,+!p4@MIER1!0.23!3.37!MIER1;;chr6:144289132..144289134,-!p3@PLAGL1!0.23!2.76!PLAGL1;;chr11:8102749..8102769,+!p2@TUB!0.23!2.15!TUB;;chr12:52430894..52430952,+!p3@NR4A1!0.23!2.15!NR4A1;;chr1:221053049..221053075,+!p3@HLX!0.23!1.84!HLX;;chr18:32924431..32924440,-!p2@ZNF24!0.23!1.84!ZNF24;;chr7:137686763..137686784,-!p5@CREB3L2!0.23!1.84!CREB3L2;;chr10:3819310..3819325,-!p5@KLF6!0.23!1.23!KLF6;;chr9:2017159..2017186,+!p12@SMARCA2!0.23!1.23!SMARCA2;;chr9:4300004..4300015,-!p6@GLIS3!0.23!0.92!GLIS3;;chr7:44143738..44143760,+!p4@AEBP1!0.23!0.92!AEBP1;;chr1:47903709..47903764,+!p1@BC169308!0.23!0.92!FOXD2;;chr12:80083689..80083706,-!p16@PAWR!0.23!0.92!PAWR;;chr19:20844356..20844365,-!p3@ZNF626!0.23!0.92!ZNF626;;chr22:30162924..30163005,-!p1@ZMAT5!0.22!18.08!ZMAT5;;chr10:3827371..3827386,-!p2@KLF6!0.22!11.95!KLF6;;chr22:41697497..41697515,+!p2@ZC3H7B!0.22!3.37!ZC3H7B;;chr22:42229210..42229229,+!p3@SREBF2!0.22!2.76!SREBF2;;chr3:23986748..23986761,+!p3@NR1D2!0.22!2.45!NR1D2;;chr3:40566371..40566400,+!p2@ZNF621!0.22!2.45!ZNF621;;chr9:130952713..130952727,-!p3@CIZ1!0.22!1.53!CIZ1;;chr12:66218378..66218401,+!p6@HMGA2!0.22!1.53!HMGA2;;chr20:50721803..50721857,-!p2@ZFP64!0.22!1.53!ZFP64;;chr1:244219775..244219893,+!p2@ZNF238!0.22!1.23!ZNF238;;chr4:87967906..87967931,+!p15@AFF1!0.22!1.23!AFF1;;chr11:6947647..6947698,+!p2@ZNF215!0.22!1.23!ZNF215;;chr12:11802909..11802920,+!p7@ETV6!0.22!1.23!ETV6;;chr13:74708269..74708291,-!p7@KLF12!0.22!1.23!KLF12;;chr11:19263160..19263176,-!p1@E2F8!0.22!0.92!E2F8;;chr11:47237922..47237964,+!p4@DDB2!0.22!0.92!DDB2;;chr1:23857325..23857416,-!p2@E2F2!0.22!0.92!E2F2;;chr19:12175573..12175584,+!p3@ZNF844!0.22!0.92!ZNF844;;chrX:47509928..47509990,-!p1@ELK1!0.21!44.75!ELK1;;chr2:70314849..70314860,+!p3@PCBP1!0.21!21.45!PCBP1;;chr5:132299210..132299228,-!p3@AFF4!0.21!16.55!AFF4;;chr12:124873357..124873401,-!p1@NCOR2!0.21!16.24!NCOR2;;chr2:217277169..217277266,+!p1@SMARCAL1!0.21!14.71!SMARCAL1;;chr12:498695..498748,-!p2@KDM5A!0.21!8.89!KDM5A;;chr19:56152437..56152467,+!p3@ZNF580!0.21!6.74!ZNF580;;chr13:41635285..41635356,-!p3@ELF1!0.21!5.21!ELF1;;chr2:208394817..208394834,+!p3@CREB1!0.21!5.21!CREB1;;chr2:217277480..217277505,+!p2@SMARCAL1!0.21!4.29!SMARCAL1;;chr22:46546406..46546440,+!p1@PPARA!0.21!2.76!PPARA;;chr19:58951496..58951539,-!p1@ZNF132!0.21!2.76!ZNF132;;chr15:66994561..66994597,+!p2@SMAD6!0.21!2.76!SMAD6;;chr1:158979851..158979865,+!p5@IFI16!0.21!2.45!IFI16;;chr3:114343826..114343869,-!p4@ZBTB20!0.21!2.15!ZBTB20;;chr7:148823387..148823440,-!p1@ZNF425!0.21!1.84!ZNF425;;chr8:28243813..28243839,-!p4@ZNF395!0.21!1.84!ZNF395;;chr12:56575310..56575344,-!p3@SMARCC2!0.21!1.53!SMARCC2;;chr1:43148244..43148275,+!p5@YBX1!0.21!1.53!YBX1;;chr21:36260295..36260310,-!p3@RUNX1!0.21!1.53!RUNX1;;chr21:36260343..36260402,-!p6@RUNX1!0.21!1.53!RUNX1;;chr10:77161650..77161661,-!p4@ZNF503!0.21!1.23!ZNF503;;chr12:12764995..12765017,+!p3@CREBL2!0.21!1.23!CREBL2;;chr14:62213827..62213853,+!p6@HIF1A!0.21!1.23!HIF1A;;chr3:23986876..23986885,+!p4@NR1D2!0.21!1.23!NR1D2;;chr22:39916289..39916302,+!p3@ATF4!0.21!0.92!ATF4;;chr8:28243785..28243799,-!p6@ZNF395!0.21!0.92!ZNF395;;chr16:69600181..69600202,+!p5@NFAT5!0.21!0.92!NFAT5;;chr15:31684663..31684717,+!p10@KLF13!0.21!0.61!KLF13;;chr15:67430351..67430366,+!p10@SMAD3!0.21!0.61!SMAD3;;chr15:67430381..67430396,+!p21@SMAD3!0.21!0.61!SMAD3;;chr15:80843484..80843499,+!p5@ARNT2!0.21!0.61!ARNT2;;chr16:54964690..54964703,+!p4@IRX5!0.21!0.61!IRX5;;chr16:54964899..54964914,+!p2@IRX5!0.21!0.61!IRX5;;chr16:79633883..79633892,-!p6@MAF!0.21!0.61!MAF;;chr16:86612320..86612394,+!p1@FOXL1!0.21!0.61!FOXL1;;chr17:7387486..7387497,-!p11@ZBTB4!0.21!0.61!ZBTB4;;chr17:79881433..79881452,-!p6@MAFG!0.21!0.61!MAFG;;chr18:32870122..32870133,-!p2@ZSCAN30!0.21!0.61!ZSCAN30;;chr18:42260840..42260860,+!p2@SETBP1!0.21!0.61!SETBP1;;ch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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002556;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000075;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000165;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0010323;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0011137 | |||
|ffid_belonging_in_development=CL:0000134 | |ffid_belonging_in_development=CL:0000134 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 38: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Periodontal%2520Ligament%252c%2520donor5%2520%2528PL30%2529.CNhs11953.11304-117B8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Periodontal%2520Ligament%252c%2520donor5%2520%2528PL30%2529.CNhs11953.11304-117B8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Periodontal%2520Ligament%252c%2520donor5%2520%2528PL30%2529.CNhs11953.11304-117B8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Periodontal%2520Ligament%252c%2520donor5%2520%2528PL30%2529.CNhs11953.11304-117B8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Periodontal%2520Ligament%252c%2520donor5%2520%2528PL30%2529.CNhs11953.11304-117B8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11304-117B8 | |id=FF:11304-117B8 | ||
|is_a=EFO:0002091;;FF:0000067 | |is_a=EFO:0002091;;FF:0000067 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11953 | |||
|library_id_phase_based=2:CNhs11953 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11304 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11304 | |||
|name=Fibroblast - Periodontal Ligament, donor5 (PL30) | |name=Fibroblast - Periodontal Ligament, donor5 (PL30) | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 46: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11953,LSID836,release011,COMPLETED | |profile_hcage=CNhs11953,LSID836,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=N/A | |rna_catalog_number=N/A | ||
Line 61: | Line 79: | ||
|rna_weight_ug=9.67846 | |rna_weight_ug=9.67846 | ||
|sample_age=40 | |sample_age=40 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 82: | Line 101: | ||
|top_motifs=FOXL1:2.31666039327;ESR1:2.13693925221;ALX4:2.10206462816;UFEwm:1.93359256392;NKX2-2,8:1.93021240992;TFAP4:1.62308329845;HES1:1.55826227554;PPARG:1.51825903729;GLI1..3:1.48083817522;RXR{A,B,G}:1.47496996927;EVI1:1.41500592452;HMGA1,2:1.38487871744;NR3C1:1.3831348185;AIRE:1.3317826909;TAL1_TCF{3,4,12}:1.29568935438;NANOG{mouse}:1.11563296602;GCM1,2:1.10344371011;PAX1,9:1.09386932023;SRF:1.05648175;NKX3-1:1.00869769882;TP53:1.00323357002;TEAD1:0.937376625488;MYBL2:0.933000382793;HMX1:0.91826570532;ZIC1..3:0.8793399201;GZF1:0.876364289002;ZNF238:0.875652896271;XBP1:0.866811631487;EBF1:0.797553669696;NFIX:0.780196045114;NFE2L1:0.777815931353;KLF4:0.754181935739;NKX3-2:0.734573934299;ZBTB6:0.727074048725;MAFB:0.711098706338;TFCP2:0.70252410623;HAND1,2:0.659351600644;TLX1..3_NFIC{dimer}:0.635671158983;IKZF1:0.621442342609;MTE{core}:0.559012284499;SOX17:0.541014493391;LHX3,4:0.536932567683;MAZ:0.526262817703;POU3F1..4:0.473604530652;ARID5B:0.465972143559;YY1:0.43800268843;MYB:0.432573360989;GFI1B:0.422360205976;TBX4,5:0.386120777938;GTF2I:0.382702658915;HOX{A5,B5}:0.378878667342;GTF2A1,2:0.358560695678;NFATC1..3:0.356412032467;XCPE1{core}:0.34187996815;GFI1:0.321912469912;RXRA_VDR{dimer}:0.299887399887;ATF6:0.291578927301;TFAP2{A,C}:0.287035810348;GATA4:0.275690893168;CDC5L:0.267274919689;TFAP2B:0.246954449675;BACH2:0.196281752992;TOPORS:0.19008976774;EN1,2:0.188737886026;NFE2L2:0.188103677251;HLF:0.181297496488;MTF1:0.151258627265;ZNF423:0.140673618737;MZF1:0.11049271944;SPZ1:0.108762839464;T:0.0730833553718;TFDP1:0.0584771429592;MEF2{A,B,C,D}:0.0464911250358;PDX1:0.0362861837808;PRDM1:0.0331968862345;TBP:0.030466524102;HIC1:0.0285845228778;STAT2,4,6:0.0155778624335;PAX4:0.0118107440472;LEF1_TCF7_TCF7L1,2:-0.00664692371301;bHLH_family:-0.0105305533947;HOX{A4,D4}:-0.012871448446;STAT5{A,B}:-0.0238233535206;PATZ1:-0.0396101746904;IRF1,2:-0.0415482027839;ELK1,4_GABP{A,B1}:-0.0459470516855;FOS_FOS{B,L1}_JUN{B,D}:-0.0529028896951;FOXO1,3,4:-0.0544451790568;FOXA2:-0.0673704121115;ONECUT1,2:-0.0836423777712;HSF1,2:-0.083823202576;AR:-0.0845557944386;ZFP161:-0.0950424412674;DMAP1_NCOR{1,2}_SMARC:-0.0963123815407;EGR1..3:-0.13259566056;NHLH1,2:-0.137657690515;MYFfamily:-0.138947476525;PAX8:-0.140216378678;PRRX1,2:-0.142054542187;NKX2-3_NKX2-5:-0.159314440556;PAX5:-0.163545490084;PITX1..3:-0.168895495012;NR6A1:-0.168959248297;PAX3,7:-0.192045903397;RUNX1..3:-0.233957020589;RREB1:-0.246554867833;SOX5:-0.254780151141;SMAD1..7,9:-0.259689692903;NR5A1,2:-0.26061529196;ZNF148:-0.266198238558;NFE2:-0.26710768968;ZNF143:-0.272615119982;FOSL2:-0.277343491516;E2F1..5:-0.278975875917;HNF1A:-0.285505765452;SP1:-0.2866645203;FOX{I1,J2}:-0.291585033355;CEBPA,B_DDIT3:-0.302967221687;REST:-0.311702771071;CREB1:-0.325798970112;FOXP1:-0.329396310628;POU5F1:-0.354786638231;HOX{A6,A7,B6,B7}:-0.370140224649;DBP:-0.379346428102;RFX1:-0.38096170464;ZNF384:-0.390684036604;NFKB1_REL_RELA:-0.402568558978;MED-1{core}:-0.406698866708;HNF4A_NR2F1,2:-0.409982239527;SREBF1,2:-0.414210157018;BPTF:-0.416550006428;FOXM1:-0.420186613896;AHR_ARNT_ARNT2:-0.435757280271;HOXA9_MEIS1:-0.445475751729;FOXD3:-0.450700204333;ATF5_CREB3:-0.489037550654;ADNP_IRX_SIX_ZHX:-0.4978645338;ZBTB16:-0.520186586734;POU6F1:-0.52167379776;NKX2-1,4:-0.525712340867;RFX2..5_RFXANK_RFXAP:-0.55522255483;ETS1,2:-0.569549172312;SPIB:-0.571165933425;POU1F1:-0.579871663637;IKZF2:-0.584190239058;SPI1:-0.587384432277;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.593862001138;POU2F1..3:-0.603415984313;JUN:-0.603956890257;HIF1A:-0.606043335459;LMO2:-0.618109202506;ELF1,2,4:-0.63032381131;ATF4:-0.635623254031;MYOD1:-0.650637853379;OCT4_SOX2{dimer}:-0.666057368346;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.667915755108;FOXP3:-0.668982840464;SNAI1..3:-0.690445944782;NKX6-1,2:-0.698169870976;RBPJ:-0.702138089994;NRF1:-0.702366443796;NFY{A,B,C}:-0.70791821815;SOX{8,9,10}:-0.710394190428;IRF7:-0.728252202111;PBX1:-0.732532655133;TEF:-0.747346231191;ESRRA:-0.748973511569;SOX2:-0.753520750052;NR1H4:-0.765801448178;NFIL3:-0.783345442254;PAX2:-0.789773810576;EP300:-0.812123808622;FOX{D1,D2}:-0.881910296829;TGIF1:-0.886306892469;PAX6:-0.903906950593;CDX1,2,4:-0.913540614797;BREu{core}:-0.926279875339;ZEB1:-0.93443889827;GATA6:-0.936191851276;RORA:-0.940922776526;HBP1_HMGB_SSRP1_UBTF:-0.943875570991;FOX{F1,F2,J1}:-1.01227720153;FOXN1:-1.11233964234;CRX:-1.12110911023;FOXQ1:-1.17122318514;CUX2:-1.19146705038;ATF2:-1.24529151755;VSX1,2:-1.25059538137;NANOG:-1.25967797002;STAT1,3:-1.28631069904;TLX2:-1.3586808736;ALX1:-1.62557092085 | |top_motifs=FOXL1:2.31666039327;ESR1:2.13693925221;ALX4:2.10206462816;UFEwm:1.93359256392;NKX2-2,8:1.93021240992;TFAP4:1.62308329845;HES1:1.55826227554;PPARG:1.51825903729;GLI1..3:1.48083817522;RXR{A,B,G}:1.47496996927;EVI1:1.41500592452;HMGA1,2:1.38487871744;NR3C1:1.3831348185;AIRE:1.3317826909;TAL1_TCF{3,4,12}:1.29568935438;NANOG{mouse}:1.11563296602;GCM1,2:1.10344371011;PAX1,9:1.09386932023;SRF:1.05648175;NKX3-1:1.00869769882;TP53:1.00323357002;TEAD1:0.937376625488;MYBL2:0.933000382793;HMX1:0.91826570532;ZIC1..3:0.8793399201;GZF1:0.876364289002;ZNF238:0.875652896271;XBP1:0.866811631487;EBF1:0.797553669696;NFIX:0.780196045114;NFE2L1:0.777815931353;KLF4:0.754181935739;NKX3-2:0.734573934299;ZBTB6:0.727074048725;MAFB:0.711098706338;TFCP2:0.70252410623;HAND1,2:0.659351600644;TLX1..3_NFIC{dimer}:0.635671158983;IKZF1:0.621442342609;MTE{core}:0.559012284499;SOX17:0.541014493391;LHX3,4:0.536932567683;MAZ:0.526262817703;POU3F1..4:0.473604530652;ARID5B:0.465972143559;YY1:0.43800268843;MYB:0.432573360989;GFI1B:0.422360205976;TBX4,5:0.386120777938;GTF2I:0.382702658915;HOX{A5,B5}:0.378878667342;GTF2A1,2:0.358560695678;NFATC1..3:0.356412032467;XCPE1{core}:0.34187996815;GFI1:0.321912469912;RXRA_VDR{dimer}:0.299887399887;ATF6:0.291578927301;TFAP2{A,C}:0.287035810348;GATA4:0.275690893168;CDC5L:0.267274919689;TFAP2B:0.246954449675;BACH2:0.196281752992;TOPORS:0.19008976774;EN1,2:0.188737886026;NFE2L2:0.188103677251;HLF:0.181297496488;MTF1:0.151258627265;ZNF423:0.140673618737;MZF1:0.11049271944;SPZ1:0.108762839464;T:0.0730833553718;TFDP1:0.0584771429592;MEF2{A,B,C,D}:0.0464911250358;PDX1:0.0362861837808;PRDM1:0.0331968862345;TBP:0.030466524102;HIC1:0.0285845228778;STAT2,4,6:0.0155778624335;PAX4:0.0118107440472;LEF1_TCF7_TCF7L1,2:-0.00664692371301;bHLH_family:-0.0105305533947;HOX{A4,D4}:-0.012871448446;STAT5{A,B}:-0.0238233535206;PATZ1:-0.0396101746904;IRF1,2:-0.0415482027839;ELK1,4_GABP{A,B1}:-0.0459470516855;FOS_FOS{B,L1}_JUN{B,D}:-0.0529028896951;FOXO1,3,4:-0.0544451790568;FOXA2:-0.0673704121115;ONECUT1,2:-0.0836423777712;HSF1,2:-0.083823202576;AR:-0.0845557944386;ZFP161:-0.0950424412674;DMAP1_NCOR{1,2}_SMARC:-0.0963123815407;EGR1..3:-0.13259566056;NHLH1,2:-0.137657690515;MYFfamily:-0.138947476525;PAX8:-0.140216378678;PRRX1,2:-0.142054542187;NKX2-3_NKX2-5:-0.159314440556;PAX5:-0.163545490084;PITX1..3:-0.168895495012;NR6A1:-0.168959248297;PAX3,7:-0.192045903397;RUNX1..3:-0.233957020589;RREB1:-0.246554867833;SOX5:-0.254780151141;SMAD1..7,9:-0.259689692903;NR5A1,2:-0.26061529196;ZNF148:-0.266198238558;NFE2:-0.26710768968;ZNF143:-0.272615119982;FOSL2:-0.277343491516;E2F1..5:-0.278975875917;HNF1A:-0.285505765452;SP1:-0.2866645203;FOX{I1,J2}:-0.291585033355;CEBPA,B_DDIT3:-0.302967221687;REST:-0.311702771071;CREB1:-0.325798970112;FOXP1:-0.329396310628;POU5F1:-0.354786638231;HOX{A6,A7,B6,B7}:-0.370140224649;DBP:-0.379346428102;RFX1:-0.38096170464;ZNF384:-0.390684036604;NFKB1_REL_RELA:-0.402568558978;MED-1{core}:-0.406698866708;HNF4A_NR2F1,2:-0.409982239527;SREBF1,2:-0.414210157018;BPTF:-0.416550006428;FOXM1:-0.420186613896;AHR_ARNT_ARNT2:-0.435757280271;HOXA9_MEIS1:-0.445475751729;FOXD3:-0.450700204333;ATF5_CREB3:-0.489037550654;ADNP_IRX_SIX_ZHX:-0.4978645338;ZBTB16:-0.520186586734;POU6F1:-0.52167379776;NKX2-1,4:-0.525712340867;RFX2..5_RFXANK_RFXAP:-0.55522255483;ETS1,2:-0.569549172312;SPIB:-0.571165933425;POU1F1:-0.579871663637;IKZF2:-0.584190239058;SPI1:-0.587384432277;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.593862001138;POU2F1..3:-0.603415984313;JUN:-0.603956890257;HIF1A:-0.606043335459;LMO2:-0.618109202506;ELF1,2,4:-0.63032381131;ATF4:-0.635623254031;MYOD1:-0.650637853379;OCT4_SOX2{dimer}:-0.666057368346;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.667915755108;FOXP3:-0.668982840464;SNAI1..3:-0.690445944782;NKX6-1,2:-0.698169870976;RBPJ:-0.702138089994;NRF1:-0.702366443796;NFY{A,B,C}:-0.70791821815;SOX{8,9,10}:-0.710394190428;IRF7:-0.728252202111;PBX1:-0.732532655133;TEF:-0.747346231191;ESRRA:-0.748973511569;SOX2:-0.753520750052;NR1H4:-0.765801448178;NFIL3:-0.783345442254;PAX2:-0.789773810576;EP300:-0.812123808622;FOX{D1,D2}:-0.881910296829;TGIF1:-0.886306892469;PAX6:-0.903906950593;CDX1,2,4:-0.913540614797;BREu{core}:-0.926279875339;ZEB1:-0.93443889827;GATA6:-0.936191851276;RORA:-0.940922776526;HBP1_HMGB_SSRP1_UBTF:-0.943875570991;FOX{F1,F2,J1}:-1.01227720153;FOXN1:-1.11233964234;CRX:-1.12110911023;FOXQ1:-1.17122318514;CUX2:-1.19146705038;ATF2:-1.24529151755;VSX1,2:-1.25059538137;NANOG:-1.25967797002;STAT1,3:-1.28631069904;TLX2:-1.3586808736;ALX1:-1.62557092085 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11304-117B8;search_select_hide=table117:FF:11304-117B8 | |||
}} | }} |
Latest revision as of 16:31, 3 June 2020
Name: | Fibroblast - Periodontal Ligament, donor5 (PL30) |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11953 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11953
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11953
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.434 |
10 | 10 | 0.179 |
100 | 100 | 0.793 |
101 | 101 | 0.397 |
102 | 102 | 0.199 |
103 | 103 | 0.451 |
104 | 104 | 0.462 |
105 | 105 | 0.328 |
106 | 106 | 0.0157 |
107 | 107 | 0.0302 |
108 | 108 | 0.288 |
109 | 109 | 0.187 |
11 | 11 | 0.231 |
110 | 110 | 0.433 |
111 | 111 | 0.816 |
112 | 112 | 0.141 |
113 | 113 | 0.0168 |
114 | 114 | 0.301 |
115 | 115 | 0.0214 |
116 | 116 | 0.0205 |
117 | 117 | 0.613 |
118 | 118 | 0.721 |
119 | 119 | 0.624 |
12 | 12 | 0.161 |
120 | 120 | 0.192 |
121 | 121 | 0.619 |
122 | 122 | 0.049 |
123 | 123 | 0.135 |
124 | 124 | 0.674 |
125 | 125 | 0.135 |
126 | 126 | 0.935 |
127 | 127 | 0.827 |
128 | 128 | 0.0372 |
129 | 129 | 0.87 |
13 | 13 | 0.923 |
130 | 130 | 0.86 |
131 | 131 | 0.813 |
132 | 132 | 0.537 |
133 | 133 | 0.549 |
134 | 134 | 0.169 |
135 | 135 | 0.648 |
136 | 136 | 0.265 |
137 | 137 | 0.319 |
138 | 138 | 0.624 |
139 | 139 | 0.909 |
14 | 14 | 0.531 |
140 | 140 | 0.425 |
141 | 141 | 0.269 |
142 | 142 | 0.842 |
143 | 143 | 0.642 |
144 | 144 | 0.74 |
145 | 145 | 0.399 |
146 | 146 | 0.906 |
147 | 147 | 0.125 |
148 | 148 | 0.983 |
149 | 149 | 0.047 |
15 | 15 | 0.714 |
150 | 150 | 0.153 |
151 | 151 | 0.634 |
152 | 152 | 0.00347 |
153 | 153 | 0.987 |
154 | 154 | 0.331 |
155 | 155 | 0.0188 |
156 | 156 | 0.884 |
157 | 157 | 0.153 |
158 | 158 | 0.00363 |
159 | 159 | 0.317 |
16 | 16 | 0.019 |
160 | 160 | 0.261 |
161 | 161 | 0.729 |
162 | 162 | 0.645 |
163 | 163 | 0.978 |
164 | 164 | 0.217 |
165 | 165 | 0.314 |
166 | 166 | 0.0345 |
167 | 167 | 0.744 |
168 | 168 | 0.966 |
169 | 169 | 0.0409 |
17 | 17 | 0.232 |
18 | 18 | 0.128 |
19 | 19 | 0.00416 |
2 | 2 | 0.316 |
20 | 20 | 0.545 |
21 | 21 | 0.0719 |
22 | 22 | 0.21 |
23 | 23 | 0.576 |
24 | 24 | 0.987 |
25 | 25 | 0.793 |
26 | 26 | 0.13 |
27 | 27 | 0.686 |
28 | 28 | 0.283 |
29 | 29 | 0.491 |
3 | 3 | 0.296 |
30 | 30 | 0.633 |
31 | 31 | 0.602 |
32 | 32 | 1.19574e-16 |
33 | 33 | 0.239 |
34 | 34 | 0.801 |
35 | 35 | 0.994 |
36 | 36 | 0.0645 |
37 | 37 | 0.0332 |
38 | 38 | 0.677 |
39 | 39 | 0.373 |
4 | 4 | 0.713 |
40 | 40 | 0.893 |
41 | 41 | 0.862 |
42 | 42 | 0.914 |
43 | 43 | 0.293 |
44 | 44 | 0.112 |
45 | 45 | 0.994 |
46 | 46 | 0.123 |
47 | 47 | 0.524 |
48 | 48 | 0.568 |
49 | 49 | 0.638 |
5 | 5 | 0.714 |
50 | 50 | 0.633 |
51 | 51 | 0.735 |
52 | 52 | 0.357 |
53 | 53 | 0.556 |
54 | 54 | 0.512 |
55 | 55 | 0.0695 |
56 | 56 | 0.984 |
57 | 57 | 0.553 |
58 | 58 | 0.737 |
59 | 59 | 0.00464 |
6 | 6 | 0.36 |
60 | 60 | 0.366 |
61 | 61 | 0.842 |
62 | 62 | 0.475 |
63 | 63 | 0.166 |
64 | 64 | 0.856 |
65 | 65 | 0.263 |
66 | 66 | 0.838 |
67 | 67 | 0.627 |
68 | 68 | 0.983 |
69 | 69 | 0.222 |
7 | 7 | 0.488 |
70 | 70 | 0.14 |
71 | 71 | 0.0959 |
72 | 72 | 0.372 |
73 | 73 | 0.00354 |
74 | 74 | 0.284 |
75 | 75 | 0.414 |
76 | 76 | 0.564 |
77 | 77 | 0.0109 |
78 | 78 | 0.645 |
79 | 79 | 0.0016 |
8 | 8 | 0.0322 |
80 | 80 | 0.162 |
81 | 81 | 0.959 |
82 | 82 | 0.208 |
83 | 83 | 0.293 |
84 | 84 | 0.76 |
85 | 85 | 0.0291 |
86 | 86 | 0.295 |
87 | 87 | 0.0212 |
88 | 88 | 0.261 |
89 | 89 | 0.0175 |
9 | 9 | 0.699 |
90 | 90 | 0.631 |
91 | 91 | 0.88 |
92 | 92 | 0.33 |
93 | 93 | 0.539 |
94 | 94 | 0.676 |
95 | 95 | 0.187 |
96 | 96 | 0.748 |
97 | 97 | 0.901 |
98 | 98 | 0.445 |
99 | 99 | 0.00644 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11953
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000067 human fibroblast of periodontium sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002556 (fibroblast of periodontium)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002384 (connective tissue)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0004121 (ectoderm-derived structure)
0004119 (endoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000075 (subdivision of skeletal system)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001758 (periodontium)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0000165 (mouth)
0003672 (dentition)
0011137 (axial skeletal system)
0010323 (cranial skeletal system)
0003129 (skull)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000001 (sample)
0000067 (human fibroblast of periodontium sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)