FFCP PHASE1:Hg19::chr1:208084585..208084627,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=947 | |EntrezGene=947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1662 | |HGNC=1662 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUX4 | |UniProt=B4DUX4 | ||
|association_with_transcript=-47bp_to_ENST00000367037_5end | |association_with_transcript=-47bp_to_ENST00000367037_5end | ||
|cluster_id=chr1:208084585..208084627,- | |||
|coexpression_cluster_id=C1470 | |coexpression_cluster_id=C1470 | ||
|description=CAGE_peak_3_at_CD34_5end | |description=CAGE_peak_3_at_CD34_5end | ||
|id=chr1:208084585..208084627,- | |id=chr1:208084585..208084627,- | ||
|ontology_enrichment_celltype=CL:0000115;4.44e-09;36!CL:0002139;9.44e-09;24!CL:0002138;3.44e-08;6 | |ontology_enrichment_celltype=CL:0000115!7.62e-10!35;CL:0002139!2.45e-09!24;CL:0002078!5.10e-08!44 | ||
| | |ontology_enrichment_celltype_v019=CL:0000115;4.44e-09;36!CL:0002139;9.44e-09;24!CL:0002138;3.44e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.51e-11,36;CL:0002078,2.49e-09,45;CL:0002139,8.43e-09,24;CL:0005020,4.99e-08,6;CL:0002138,4.99e-08,6;CL:0005022,4.99e-08,6 | |||
|ontology_enrichment_development_v019=CL:0005022;3.44e-08;6!UBERON:0004872;3.53e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0007023;4.48e-12;114!UBERON:0001893;2.55e-08;34!UBERON:0003528;6.04e-08;34!UBERON:0002020;6.04e-08;34!UBERON:0002791;1.37e-07;32!UBERON:0001869;1.42e-07;32!UBERON:0002780;1.88e-07;41!UBERON:0001890;1.88e-07;41 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-52!115;UBERON:0001049!1.05e-20!57;UBERON:0005068!1.05e-20!57;UBERON:0006241!1.05e-20!57;UBERON:0007135!1.05e-20!57;UBERON:0003075!1.69e-17!86;UBERON:0007284!1.69e-17!86;UBERON:0002616!2.45e-17!59;UBERON:0004111!7.38e-17!241;UBERON:0003080!1.70e-16!42;UBERON:0002346!5.74e-16!90;UBERON:0002780!8.94e-16!41;UBERON:0001890!8.94e-16!41;UBERON:0006240!8.94e-16!41;UBERON:0001893!9.62e-16!34;UBERON:0002020!9.69e-16!34;UBERON:0003528!9.69e-16!34;UBERON:0000477!2.07e-15!286;UBERON:0000025!2.39e-15!194;UBERON:0002791!3.14e-15!33;UBERON:0001017!6.77e-15!82;UBERON:0001869!1.30e-14!32;UBERON:0005743!2.03e-14!86;UBERON:0000955!3.67e-14!69;UBERON:0006238!3.67e-14!69;UBERON:0000073!2.02e-12!94;UBERON:0001016!2.02e-12!94;UBERON:0000956!3.72e-11!25;UBERON:0000203!3.72e-11!25;UBERON:0003056!2.44e-10!61;UBERON:0002619!4.51e-09!22;UBERON:0000064!7.92e-09!219;UBERON:0000153!1.53e-08!129;UBERON:0007811!1.53e-08!129;UBERON:0000483!3.41e-08!309;UBERON:0001950!3.68e-08!20;UBERON:0000119!3.70e-08!312;UBERON:0000033!1.51e-07!123;UBERON:0000055!2.19e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.48e-12;114!UBERON:0001893;2.55e-08;34!UBERON:0003528;6.04e-08;34!UBERON:0002020;6.04e-08;34!UBERON:0002791;1.37e-07;32!UBERON:0001869;1.42e-07;32!UBERON:0002780;1.88e-07;41!UBERON:0001890;1.88e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.78e-44,114;UBERON:0004111,1.97e-11,240;UBERON:0000073,1.88e-10,53;UBERON:0002616,1.88e-10,53;UBERON:0001049,2.21e-10,56;UBERON:0005068,2.21e-10,56;UBERON:0006241,2.21e-10,56;UBERON:0007135,2.21e-10,56;UBERON:0000025,2.63e-09,192;UBERON:0002780,3.07e-09,41;UBERON:0001890,3.07e-09,41;UBERON:0003080,3.07e-09,41;UBERON:0006240,3.07e-09,41;UBERON:0001893,5.00e-09,34;UBERON:0003528,5.03e-09,34;UBERON:0002020,5.03e-09,34;UBERON:0003075,5.10e-09,82;UBERON:0007284,5.10e-09,82;UBERON:0002346,3.44e-08,86;UBERON:0001869,7.04e-08,32;UBERON:0002791,7.32e-08,32;UBERON:0010314,1.32e-07,132;UBERON:0000955,5.18e-07,68;UBERON:0006238,5.18e-07,68 | |||
|phase1_expression=0.54503513781167,0,4.79244973926302,1.0007329835313,0,9.59572376510406,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0,0,2.86235987131057,8.48621435451882,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,9.9824149373848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,2.24203425192614,4.47752944117631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,1.02290049474824,0,0,0,0,0,0,0,0.087834785693126,4.51877810467109,0,0,0,0,0,0,0,0,2.58391129576717,0,0.347140501607594,0,0.419499436209906,0.825354125820202,1.8809546988313,2.32575083252396,2.13459757612026,12.3846626722928,11.2792208790561,3.04108842287405,9.51842024437861,0,2.43042584364528,3.57198913136319,1.79623498100936,1.80178368773316,0,0,0,0,0,0,0,1.13967460498122,0.132409180813219,1.43418310374407,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.969876340912871,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90524363699719,2.80483547606892,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0,10.3943842387973,6.48179717607255,2.09279567458058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,2.04682899626681,0,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9226737699255,1.19065593693561,4.96606607034921,16.9649977959318,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,2.26016233240486,0,1.32687795048244,1.31535265576129,0,0,0,0,0,0,0,0,0,2.74439925886963,1.97576935775941,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.9179774293992,18.3845155327072,15.6638451215673,1.94773164164733,0,0,0,0,9.98821489029459,0,0,0,0,0,0,0,0,0,0,1.6227340708559,17.6528143038845,7.04935025439248,0,9.23001529412932,0.606802608747567,0,0,0,0,0,0,0.703347082052564,0,0,0,11.556383318562,2.21027132424918,0,0,0,0,0,0,0,5.22810049875748,0,0,0.969332746095218,1.39152147242777,0,0,0,3.62499787717397,0,0,0,0,0,0,1.77148277162768,0.482385754501632,0,0.663475559587348,1.47773809476774,1.75508317723178,0,0,10.619135673524,0,0,0,0,3.19001159731919,0,4.26427820814908,0,3.29658538429552,9.1416425045086,0,0,0,0,4.4502242114506,0,34.1156569052619,0,0,0.995261931078505,5.30745387020035,4.27721101453538,0,0,0,2.15683625538167,8.02577647298789,1.87411556580271,0,0,0,1.57833761139756,1.20990716048664,0.30607276163049,4.7389934721366,0,0.103688191397247,0,0,0,0,0,0,0,0,0,6.98906672968121,0,0,0,0,6.4982641047241,0,5.42353777873278,0,0,1.39283751102933,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,2.19048606227189,3.83239764200917,0,0,16.1983792737907,11.4580212005842,12.2038414178058,3.79390100948083,9.44297305900456,9.15002975511677,8.53230100581423,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,0,0,1.94398581305679,0,3.54625682846392,4.35373081520484,0,0,0,6.4322579373603,11.2555634962123,0,0,0,0,0,2.70905318472819,0,0,0.293104467356165,0,1.80996138906171,1.45455861916959,0,0,4.69864615297857,11.9475271875746,1.65695622138878,1.48849806543585,0,0,0,4.35214242695579,4.7631079864313,3.36980134439808,2.62298104567844,0,0.886068179966986,0.732157589411779,1.3771002377715,0.573409195690071,1.33114861844223,2.04918129706565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,1.45478927362048,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,1.15612605173627,1.41696576325585,1.75597244962866,0.615349092722265,0.252071696221718,1.31398779682014,2.42213468447777,2.85538840518309,0,0,0,0,0,0,0,4.73825068600321,0,2.34454203369928,0,0,0,1.2832141077495,0,1.03343398250592,2.15613754659283,0,1.64477330057155,5.95453414067153,0,0,0,2.35398605553177,0,0.227662191351298,7.45099909366166,0,0,1.42736439251347,1.38122824481983,0,0,5.5730095923865,0.314231179832004,0,0.913158720509496,0,0,3.71678029718613,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,5.17943069750316,8.62367577592475,6.95888658802919,4.37139893753226,0,0,0,0,0,0,1.92935395269862,2.18559560503957,0,7.10930133086326,0,0.785233868459781,0.297046400327086,2.113278637917,0,2.91350145737546,5.9301256935691,0,0,0,0,3.65168194123259,1.37618785021362,1.14671666521161,0,1.49581278420012,0.436350690340377,3.7031878836078,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,7.04741893429626,2.94760543171796,0,1.13776295448085,6.39701945702943,7.14193294391221,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| ||
|short_description=p3@CD34 | |short_description=p3@CD34 | ||
}} | }} |
Latest revision as of 17:16, 24 September 2015
Short description: | p3@CD34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD34_5end |
Coexpression cluster: | C1470_acute_Renal_clear_Endothelial_diaphragm_skeletal_Lymphatic |
Association with transcript: | -47bp_to_ENST00000367037_5end |
EntrezGene: | CD34 |
HGNC: | 1662 |
UniProt: | B4DUX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.51e-11 | 36 |
meso-epithelial cell | 2.49e-09 | 45 |
endothelial cell of vascular tree | 8.43e-09 | 24 |
lymphangioblast | 4.99e-08 | 6 |
endothelial cell of lymphatic vessel | 4.99e-08 | 6 |
vascular lymphangioblast | 4.99e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.78e-44 | 114 |
anatomical conduit | 1.97e-11 | 240 |
regional part of nervous system | 1.88e-10 | 53 |
regional part of brain | 1.88e-10 | 53 |
neural tube | 2.21e-10 | 56 |
neural rod | 2.21e-10 | 56 |
future spinal cord | 2.21e-10 | 56 |
neural keel | 2.21e-10 | 56 |
tube | 2.63e-09 | 192 |
regional part of forebrain | 3.07e-09 | 41 |
forebrain | 3.07e-09 | 41 |
anterior neural tube | 3.07e-09 | 41 |
future forebrain | 3.07e-09 | 41 |
telencephalon | 5.00e-09 | 34 |
brain grey matter | 5.03e-09 | 34 |
gray matter | 5.03e-09 | 34 |
neural plate | 5.10e-09 | 82 |
presumptive neural plate | 5.10e-09 | 82 |
neurectoderm | 3.44e-08 | 86 |
cerebral hemisphere | 7.04e-08 | 32 |
regional part of telencephalon | 7.32e-08 | 32 |
structure with developmental contribution from neural crest | 1.32e-07 | 132 |
brain | 5.18e-07 | 68 |
future brain | 5.18e-07 | 68 |