FFCP PHASE1:Hg19::chrX:117250709..117250720,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90293 | |EntrezGene=90293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22931 | |HGNC=22931 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000371882_5end | |association_with_transcript=40bp_to_ENST00000371882_5end | ||
|cluster_id=chrX:117250709..117250720,- | |||
|coexpression_cluster_id=C4847 | |coexpression_cluster_id=C4847 | ||
|description=CAGE_peak_3_at_KLHL13_5end | |description=CAGE_peak_3_at_KLHL13_5end | ||
|id=chrX:117250709..117250720,- | |id=chrX:117250709..117250720,- | ||
|ontology_enrichment_celltype=CL:1000507;6.39e-17;10!CL:1000494;6.39e-17;10!CL:0000239;2.17e-11;3!CL:1000615;2.17e-11;3!CL:0002306;2.17e-11;3!CL:1000449;6.14e-11;15!CL:1000497;1.57e-09;17!CL:0002518;1.57e-09;17!CL:0000333;1.87e-07;5!CL:0002681;2.70e-07;12!CL:0002584;2.70e-07;12 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:1000507;6.39e-17;10!CL:1000494;6.39e-17;10!CL:0000239;2.17e-11;3!CL:1000615;2.17e-11;3!CL:0002306;2.17e-11;3!CL:1000449;6.14e-11;15!CL:1000497;1.57e-09;17!CL:0002518;1.57e-09;17!CL:0000333;1.87e-07;5!CL:0002681;2.70e-07;12!CL:0002584;2.70e-07;12 | ||
|ontology_enrichment_disease=DOID:3307;6.58e-08;2 | |ontology_enrichment_celltype_v019_2=CL:1000507,4.77e-17,10;CL:1000494,4.77e-17,10;CL:0000239,2.27e-11,3;CL:1000615,2.27e-11,3;CL:0002306,2.27e-11,3;CL:1000449,5.09e-11,15;CL:1000497,1.33e-09,17;CL:0002518,1.33e-09,17;CL:0002681,2.66e-07,12;CL:0002584,2.66e-07,12 | ||
|ontology_enrichment_uberon=UBERON:0001737;2.77e-18;9!UBERON:0001557;2.77e-18;9!UBERON:0004211;6.39e-17;10!UBERON:0009773;6.39e-17;10!UBERON:0001231;6.39e-17;10!UBERON:0004810;6.39e-17;10!UBERON:0006853;2.17e-11;3!UBERON:0007685;2.17e-11;3!UBERON:0004134;2.17e-11;3!UBERON:0006555;6.14e-11;15!UBERON:0004819;6.14e-11;15!UBERON:0001285;6.14e-11;15!UBERON:0007684;6.14e-11;15!UBERON:0002113;1.18e-10;24!UBERON:0011143;1.18e-10;24!UBERON:0000489;1.57e-08;29!UBERON:0006554;3.42e-08;30!UBERON:0001008;3.42e-08;30!UBERON:0000013;1.87e-07;5!UBERON:0002410;1.87e-07;5!UBERON:0000995;1.92e-07;17!UBERON:0001225;2.70e-07;12!UBERON:0008987;2.70e-07;12!UBERON:0003975;5.47e-07;18 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;6.58e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.17e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.98e-09!9;UBERON:0000477!5.70e-09!286;UBERON:0000062!1.82e-08!511;UBERON:0000922!4.29e-08!612;UBERON:0000481!6.76e-08!347;UBERON:0000467!8.03e-08!625;UBERON:0000480!1.01e-07!626;UBERON:0000468!1.41e-07!659;UBERON:0000064!2.27e-07!219;UBERON:0002050!2.44e-07!605;UBERON:0005423!2.44e-07!605;UBERON:0000923!5.05e-07!604;UBERON:0005291!5.05e-07!604;UBERON:0006598!5.05e-07!604;UBERON:0002532!5.05e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.77e-18;9!UBERON:0001557;2.77e-18;9!UBERON:0004211;6.39e-17;10!UBERON:0009773;6.39e-17;10!UBERON:0001231;6.39e-17;10!UBERON:0004810;6.39e-17;10!UBERON:0006853;2.17e-11;3!UBERON:0007685;2.17e-11;3!UBERON:0004134;2.17e-11;3!UBERON:0006555;6.14e-11;15!UBERON:0004819;6.14e-11;15!UBERON:0001285;6.14e-11;15!UBERON:0007684;6.14e-11;15!UBERON:0002113;1.18e-10;24!UBERON:0011143;1.18e-10;24!UBERON:0000489;1.57e-08;29!UBERON:0006554;3.42e-08;30!UBERON:0001008;3.42e-08;30!UBERON:0000013;1.87e-07;5!UBERON:0002410;1.87e-07;5!UBERON:0000995;1.92e-07;17!UBERON:0001225;2.70e-07;12!UBERON:0008987;2.70e-07;12!UBERON:0003975;5.47e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.99e-18,9;UBERON:0004810,4.77e-17,10;UBERON:0006853,2.27e-11,3;UBERON:0007685,2.27e-11,3;UBERON:0004134,2.27e-11,3;UBERON:0004211,5.09e-11,15;UBERON:0009773,5.09e-11,15;UBERON:0001231,5.09e-11,15;UBERON:0001285,5.09e-11,15;UBERON:0007684,5.09e-11,15;UBERON:0004208,5.09e-11,15;UBERON:0001557,1.02e-10,19;UBERON:0006555,2.88e-10,16;UBERON:0004819,2.88e-10,16;UBERON:0002113,9.69e-10,26;UBERON:0003918,9.69e-10,26;UBERON:0011143,9.69e-10,26;UBERON:0005095,9.69e-10,26;UBERON:0007687,9.69e-10,26;UBERON:0000489,6.65e-08,31;UBERON:0005795,2.24e-07,22;UBERON:0000013,2.63e-07,5;UBERON:0002410,2.63e-07,5;UBERON:0001225,2.66e-07,12;UBERON:0008987,2.66e-07,12;UBERON:0003103,3.36e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,10.843174571537,2.50668955317945,5.35932120155048,0.795285947051099,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.851363990735132,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.803697554556718,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.633152558322899,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0.653847612453835,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.61417158655884,0.929932030581889,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0,0,0,1.05166641234618,0,0,0,0,0,0,0,0,0.337552664482532,0.194874010322397,0,0.0920498986422993,0.646584227275248,0,0,0.508681776931463,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,1.30137480043828,1.34867752062481,1.92808823906786,2.09558548191549,0.871517776369625,0.71181185733329,1.07865046528132,1.37355025587742,1.53898862778556,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0.288732895522148,0,0.761016608938393,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,0.858840442033979,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0.64341568457443,0,0,0,0,0,0,0.120859449591622,0,0,0.918515585316854,0.546273504020151,0.655622074797121,0,2.00239876471478,1.56869953835371,0,3.0609972378934,0,0,0.215915916102139,0,0.541892875087706,1.50506932156456,1.52925763827023,2.49322802678617,1.11937377361089,0,0,0.256450125116389,0,0.325378394664303,0,0.27470839445503,0.495056999523528,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.438770794307945,0.762569244632931,2.78847488557207,3.23191085715948,0,0,0,0,0,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0.979396848954886,0.141353071433941,0.649165919226273,1.99052386215701,0.442287822516696,0,0,0,0,0.202203398942031,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,2.41981432097328,0.61214552326098,0.442306057399416,0.300646838828985,0.103688191397247,0,0,0,1.19472429772959,1.42304773014896,0.138674673013139,2.2562765983567,0.0979923974143777,0.435296032902013,0.698906672968121,0,0.290268993867255,0.219267951258557,0.246346371159628,0.387956065953678,0,0.90392296312213,0,0.19871461170299,0,0.195551382734803,0,0.85381197895741,0,0,0,4.46146994441108,0,0,0.235694034616795,0,0,0,0,0,0.410716136675979,1.27746588066972,0.429765441419957,0,1.39641200636127,0,0,0.399358000997982,0,1.33902874465124,1.5452198671947,0,0,0,0,0,0.393709926058995,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0.182248669974074,1.0063040627978,1.26089131678717,3.72427575758487,0,0,0.383830394638891,0,0.662091970365432,0,0.542999601753713,0,0.653174720218818,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.434674820589684,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,1.0062716070103,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0.426766918776564,0,0,0,0,0,1.02315497042921,11.4294300080483,0,6.11573973875278,1.18812770967818,0.637724760305049,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.588886311006154,0.353909170043221,0.550285795565037,0.115525666150338,1.52552838186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| ||
|short_description=p3@KLHL13 | |short_description=p3@KLHL13 | ||
}} | }} |
Latest revision as of 03:47, 19 September 2015
Short description: | p3@KLHL13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLHL13_5end |
Coexpression cluster: | C4847_neuroblastoma_gastrointestinal_cervical_Chondrocyte_uterus_Renal_kidney |
Association with transcript: | 40bp_to_ENST00000371882_5end |
EntrezGene: | KLHL13 |
HGNC: | 22931 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.77e-17 | 10 |
nephron tubule epithelial cell | 4.77e-17 | 10 |
brush border epithelial cell | 2.27e-11 | 3 |
kidney cortex tubule cell | 2.27e-11 | 3 |
epithelial cell of proximal tubule | 2.27e-11 | 3 |
epithelial cell of nephron | 5.09e-11 | 15 |
kidney cell | 1.33e-09 | 17 |
kidney epithelial cell | 1.33e-09 | 17 |
kidney cortical cell | 2.66e-07 | 12 |
renal cortical epithelial cell | 2.66e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.99e-18 | 9 |
nephron tubule epithelium | 4.77e-17 | 10 |
renal cortex tubule | 2.27e-11 | 3 |
region of nephron tubule | 2.27e-11 | 3 |
proximal tubule | 2.27e-11 | 3 |
nephron epithelium | 5.09e-11 | 15 |
renal tubule | 5.09e-11 | 15 |
nephron tubule | 5.09e-11 | 15 |
nephron | 5.09e-11 | 15 |
uriniferous tubule | 5.09e-11 | 15 |
nephrogenic mesenchyme | 5.09e-11 | 15 |
upper respiratory tract | 1.02e-10 | 19 |
excretory tube | 2.88e-10 | 16 |
kidney epithelium | 2.88e-10 | 16 |
kidney | 9.69e-10 | 26 |
kidney mesenchyme | 9.69e-10 | 26 |
upper urinary tract | 9.69e-10 | 26 |
kidney rudiment | 9.69e-10 | 26 |
kidney field | 9.69e-10 | 26 |
cavitated compound organ | 6.65e-08 | 31 |
embryonic uterus | 2.24e-07 | 22 |
sympathetic nervous system | 2.63e-07 | 5 |
autonomic nervous system | 2.63e-07 | 5 |
cortex of kidney | 2.66e-07 | 12 |
renal parenchyma | 2.66e-07 | 12 |
compound organ | 3.36e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.17e-08 | 2 |