FFCP PHASE1:Hg19::chr4:147866993..147867021,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83894 | |EntrezGene=83894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29936 | |HGNC=29936 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQZ6 | |UniProt=E7EQZ6 | ||
|association_with_transcript=-8bp_to_ENST00000508306_5end | |association_with_transcript=-8bp_to_ENST00000508306_5end | ||
|cluster_id=chr4:147866993..147867021,- | |||
|description=CAGE_peak_1_at_TTC29_5end | |description=CAGE_peak_1_at_TTC29_5end | ||
|id=chr4:147866993..147867021,- | |id=chr4:147866993..147867021,- | ||
|ontology_enrichment_celltype=CL:0000097;6.36e-15;5!CL:0000163;3.99e-08;9 | |ontology_enrichment_celltype=CL:0002274!6.09e-07!5;CL:0000457!6.09e-07!5;CL:0002191!6.09e-07!5;CL:0000097!6.09e-07!5;CL:0000831!6.09e-07!5;CL:0002028!6.09e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;6.36e-15;5!CL:0000163;3.99e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.31e-15,5;CL:0002028,6.31e-15,5;CL:0000163,3.97e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.13e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002298;6.60e-13;6!UBERON:0001896;5.67e-10;3!UBERON:0005290;5.67e-10;3!UBERON:0000125;2.33e-08;9!UBERON:0002308;2.33e-08;9!UBERON:0000073;5.18e-08;53!UBERON:0002616;5.18e-08;53!UBERON:0003127;1.42e-07;2!UBERON:0000369;2.04e-07;4!UBERON:0002435;2.04e-07;4!UBERON:0000204;2.04e-07;4!UBERON:0001873;2.13e-07;2!UBERON:0002148;2.77e-07;2!UBERON:0006331;2.77e-07;2!UBERON:0009662;2.77e-07;2!UBERON:0000341;2.82e-07;2!UBERON:0002784;5.49e-07;4!UBERON:0001897;8.55e-07;2!UBERON:0010225;8.55e-07;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.41e-22!57;UBERON:0005068!4.41e-22!57;UBERON:0006241!4.41e-22!57;UBERON:0007135!4.41e-22!57;UBERON:0005743!2.33e-19!86;UBERON:0002616!3.37e-19!59;UBERON:0000073!4.61e-19!94;UBERON:0001016!4.61e-19!94;UBERON:0001017!4.70e-19!82;UBERON:0002780!7.67e-18!41;UBERON:0001890!7.67e-18!41;UBERON:0006240!7.67e-18!41;UBERON:0003080!3.58e-17!42;UBERON:0002346!1.36e-16!90;UBERON:0003075!2.04e-16!86;UBERON:0007284!2.04e-16!86;UBERON:0000955!2.31e-16!69;UBERON:0006238!2.31e-16!69;UBERON:0007023!4.97e-16!115;UBERON:0002020!2.18e-15!34;UBERON:0003528!2.18e-15!34;UBERON:0001893!4.53e-15!34;UBERON:0001869!7.46e-15!32;UBERON:0002791!2.14e-14!33;UBERON:0003056!9.76e-14!61;UBERON:0002619!4.28e-13!22;UBERON:0001950!5.34e-13!20;UBERON:0000956!7.16e-11!25;UBERON:0000203!7.16e-11!25;UBERON:0000025!3.16e-10!194;UBERON:0000483!9.80e-09!309;UBERON:0000119!2.03e-08!312;UBERON:0000153!2.22e-08!129;UBERON:0007811!2.22e-08!129;UBERON:0000033!1.06e-07!123;UBERON:0000924!5.49e-07!173;UBERON:0006601!5.49e-07!173;UBERON:0004111!6.75e-07!241;UBERON:0004121!9.93e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;6.60e-13;6!UBERON:0001896;5.67e-10;3!UBERON:0005290;5.67e-10;3!UBERON:0000125;2.33e-08;9!UBERON:0002308;2.33e-08;9!UBERON:0000073;5.18e-08;53!UBERON:0002616;5.18e-08;53!UBERON:0003127;1.42e-07;2!UBERON:0000369;2.04e-07;4!UBERON:0002435;2.04e-07;4!UBERON:0000204;2.04e-07;4!UBERON:0001873;2.13e-07;2!UBERON:0002148;2.77e-07;2!UBERON:0006331;2.77e-07;2!UBERON:0009662;2.77e-07;2!UBERON:0000341;2.82e-07;2!UBERON:0002784;5.49e-07;4!UBERON:0001897;8.55e-07;2!UBERON:0010225;8.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.04e-13,114;UBERON:0002298,4.99e-13,6;UBERON:0001049,3.05e-12,56;UBERON:0005068,3.05e-12,56;UBERON:0006241,3.05e-12,56;UBERON:0007135,3.05e-12,56;UBERON:0000073,1.44e-11,53;UBERON:0002616,1.44e-11,53;UBERON:0001016,8.90e-11,89;UBERON:0001896,4.09e-10,3;UBERON:0005290,4.09e-10,3;UBERON:0010096,4.09e-10,3;UBERON:0000955,3.64e-09,68;UBERON:0006238,3.64e-09,68;UBERON:0001017,3.96e-09,81;UBERON:0000125,2.03e-08,9;UBERON:0002308,2.03e-08,9;UBERON:0003127,1.43e-07,2;UBERON:0000369,1.70e-07,4;UBERON:0002435,1.70e-07,4;UBERON:0000204,1.70e-07,4;UBERON:0010082,1.70e-07,4;UBERON:0001873,1.95e-07,2;UBERON:0010122,1.95e-07,2;UBERON:0002780,2.67e-07,41;UBERON:0001890,2.67e-07,41;UBERON:0003080,2.67e-07,41;UBERON:0006240,2.67e-07,41;UBERON:0002148,2.74e-07,2;UBERON:0006331,2.74e-07,2;UBERON:0009662,2.74e-07,2;UBERON:0000341,2.82e-07,2;UBERON:0003075,4.43e-07,82;UBERON:0007284,4.43e-07,82;UBERON:0002784,6.73e-07,4;UBERON:0003076,7.19e-07,15;UBERON:0003057,7.19e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,15.062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13459757612026,0.66944122552934,0.402829317109147,0,0,0,1.62028389576352,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,1.24864030732128,0,0.747243402759005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,1.0366105501537,1.00928340350251,1.09493207722749,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0.358234090811393,0,0,1.47798971368783,1.05658120815871,4.97587477297853,8.35895729818376,7.44830357215642,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,4.67328986265259,0,0,0,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0.211103257785751,0,1.02056223165909,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,2.16386124460217,0,0,0,0,0,1.06337790121334,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0.170453254832202,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0.487426979262569,0,0,0,0,0,0,0.876901770507525,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,67.9085390867327,0,0,0,1.9882952955326,0.281338832821026,0.222617410045812,0,0.211125408127993,4.38345574152353,0,0.755798243562828,0,0,0,0,0,0,0,0,0,2.90799823828566,0.927680981618513,0,0,0,0,0,0,0,0,0,0,8.85741385813839,5.78862905401958,0,0,0.295547618953547,1.97446857438575,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,5.65119718460532,0,0,0,0,2.38404868470568,5.69694774225673,0.816164040795739,0,0,0,0,0,0,0,0,2.49384192028505,0,1.40558667435203,0,0.19566461893209,0,0.789168805698781,0,0.61214552326098,0.063186579628488,0,0,0,0.330991955875499,0.627865836814451,0,0.853828638089378,0,0,0.0979923974143777,0,13.2792267863943,0,0,0,0,0,0.264768380074501,0.451961481561065,0.274083849293502,3.17943378724783,0.379864775735272,0.195551382734803,0.0801588202515337,0,0,0,0,19.0470447626781,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.590564889088493,0,0,2.45166131000836,0.321506296930038,0.412618309791701,0.415440338029185,0.899895566206002,0,0.425246896606173,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,7.36912851260838,4.62814106099415,0,0,7.26154405460324,23.7378500700496,12.8414107157631,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.751145584238999,23.5097770232929,8.65246601987448,1.73869928235874,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.466311601748341,0,0,0,0,0,0,0,0,0,0,1.81848659202559,0.107410557042488,0,0,0,0,0,0,0,0,3.13193150358254,0.226705925512272,0.231522474323834,0,0,0,0,0,0.38582807654183,0,0,0,0.303859956177382,0.414775308455192,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,1.84105950251841,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,1.11728983594649,0,0,0,0.352675943690684,0,1.41304295212211,0,0.478901577171454,0.205116364240755,0.252071696221718,0.345786262321089,1.29180516505481,0,0,0,0,0,0.381382095467167,0,0,4.36219904425692,0.40341013740704,0,0,0,0.443568258651136,0.472763092328763,1.56215619722769,0.620060389503552,0.253663240775627,1.09394961803644,0,0,0,0,0,1.3451348888753,0,0.455324382702595,0,0,0,0.611727596791485,0.591954962065642,0,0,0,0.471346769748006,0,1.82631744101899,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0,1.18332000730565,1.02256085710989,0,0.4582137370881,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.356760272332706,0,0,0.754814217833368,0,0.218559560503957,0,0,0,0.588925401344836,0,2.5359343655004,0.169927114687817,0,0,0,0.178553938605658,0.705789743431384,0.240724100067505,0,0,0,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0,0,0,0,0.18378979906969,0,50.2412769186927,68.3308531898255,4.1458471972939,1.03432995861895,3.41174371041569,8.57031953269465,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,17.2133292942423,8.64916927019635,0,0.213454691755431,0,0,0,0.366724332548599,1.22068853494722,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,15.062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13459757612026,0.66944122552934,0.402829317109147,0,0,0,1.62028389576352,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,1.24864030732128,0,0.747243402759005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,1.0366105501537,1.00928340350251,1.09493207722749,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0.358234090811393,0,0,1.47798971368783,1.05658120815871,4.97587477297853,8.35895729818376,7.44830357215642,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,4.67328986265259,0,0,0,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0.211103257785751,0,1.02056223165909,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,2.16386124460217,0,0,0,0,0,1.06337790121334,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0.170453254832202,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0.487426979262569,0,0,0,0,0,0,0.876901770507525,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,67.9085390867327,0,0,0,1.9882952955326,0.281338832821026,0.222617410045812,0,0.211125408127993,4.38345574152353,0,0.755798243562828,0,0,0,0,0,0,0,0,0,2.90799823828566,0.927680981618513,0,0,0,0,0,0,0,0,0,0,8.85741385813839,5.78862905401958,0,0,0.295547618953547,1.97446857438575,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,5.65119718460532,0,0,0,0,2.38404868470568,5.69694774225673,0.816164040795739,0,0,0,0,0,0,0,0,2.49384192028505,0,1.40558667435203,0,0.19566461893209,0,0.789168805698781,0,0.61214552326098,0.063186579628488,0,0,0,0.330991955875499,0.627865836814451,0,0.853828638089378,0,0,0.0979923974143777,0,13.2792267863943,0,0,0,0,0,0.264768380074501,0.451961481561065,0.274083849293502,3.17943378724783,0.379864775735272,0.195551382734803,0.0801588202515337,0,0,0,0,19.0470447626781,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.590564889088493,0,0,2.45166131000836,0.321506296930038,0.412618309791701,0.415440338029185,0.899895566206002,0,0.425246896606173,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,7.36912851260838,4.62814106099415,0,0,7.26154405460324,23.7378500700496,12.8414107157631,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.751145584238999,23.5097770232929,8.65246601987448,1.73869928235874,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.466311601748341,0,0,0,0,0,0,0,0,0,0,1.81848659202559,0.107410557042488,0,0,0,0,0,0,0,0,3.13193150358254,0.226705925512272,0.231522474323834,0,0,0,0,0,0.38582807654183,0,0,0,0.303859956177382,0.414775308455192,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,1.84105950251841,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,1.11728983594649,0,0,0,0.352675943690684,0,1.41304295212211,0,0.478901577171454,0.205116364240755,0.252071696221718,0.345786262321089,1.29180516505481,0,0,0,0,0,0.381382095467167,0,0,4.36219904425692,0.40341013740704,0,0,0,0.443568258651136,0.472763092328763,1.56215619722769,0.620060389503552,0.253663240775627,1.09394961803644,0,0,0,0,0,1.3451348888753,0,0.455324382702595,0,0,0,0.611727596791485,0.591954962065642,0,0,0,0.471346769748006,0,1.82631744101899,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0,1.18332000730565,1.02256085710989,0,0.4582137370881,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.356760272332706,0,0,0.754814217833368,0,0.218559560503957,0,0,0,0.588925401344836,0,2.5359343655004,0.169927114687817,0,0,0,0.178553938605658,0.705789743431384,0.240724100067505,0,0,0,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0,0,0,0,0.18378979906969,0,50.2412769186927,68.3308531898255,4.1458471972939,1.03432995861895,3.41174371041569,8.57031953269465,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,17.2133292942423,8.64916927019635,0,0.213454691755431,0,0,0,0.366724332548599,1.22068853494722,0,0,0 | ||
|short_description=p1@TTC29 | |short_description=p1@TTC29 | ||
}} | }} |
Latest revision as of 23:56, 15 September 2015
Short description: | p1@TTC29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTC29_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000508306_5end |
EntrezGene: | TTC29 |
HGNC: | 29936 |
UniProt: | E7EQZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.31e-15 | 5 |
basophil mast progenitor cell | 6.31e-15 | 5 |
endocrine cell | 3.97e-08 | 9 |