FFCP PHASE1:Hg19::chr18:53256971..53256984,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5M6 | |UniProt=B7Z5M6 | ||
|association_with_transcript=60bp_to_ENST00000537578,NM_001243227,NM_001243228,uc010dpi.2,uc010xdy.1_5end | |association_with_transcript=60bp_to_ENST00000537578,NM_001243227,NM_001243228,uc010dpi.2,uc010xdy.1_5end | ||
|cluster_id=chr18:53256971..53256984,- | |||
|description=CAGE_peak_26_at_TCF4_5end | |description=CAGE_peak_26_at_TCF4_5end | ||
|id=chr18:53256971..53256984,- | |id=chr18:53256971..53256984,- | ||
|ontology_enrichment_celltype=CL:0002319!2.49e-09!25;CL:0000047!1.90e-07!8 | |ontology_enrichment_celltype=CL:0002319!2.49e-09!25;CL:0000047!1.90e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.11e-13;6!CL:0000404;4.11e-13;6!CL:0000784;8.97e-11;3!CL:0002319;1.80e-09;25!CL:0000047;4.57e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.23e-18,8;CL:0000540,5.62e-13,6;CL:0000031,5.62e-13,6;CL:0000404,5.62e-13,6;CL:0000784,9.06e-11,3;CL:0002319,1.55e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000031;4.11e-13;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.95e-28!82;UBERON:0000073!2.67e-26!94;UBERON:0001016!2.67e-26!94;UBERON:0005743!3.29e-26!86;UBERON:0000955!3.66e-20!69;UBERON:0006238!3.66e-20!69;UBERON:0001049!2.81e-18!57;UBERON:0005068!2.81e-18!57;UBERON:0006241!2.81e-18!57;UBERON:0007135!2.81e-18!57;UBERON:0002616!1.29e-16!59;UBERON:0001893!1.07e-15!34;UBERON:0002791!3.24e-15!33;UBERON:0002020!7.04e-15!34;UBERON:0003528!7.04e-15!34;UBERON:0001869!8.85e-15!32;UBERON:0002780!1.06e-14!41;UBERON:0001890!1.06e-14!41;UBERON:0006240!1.06e-14!41;UBERON:0002346!2.50e-14!90;UBERON:0003080!5.25e-14!42;UBERON:0007023!8.29e-14!115;UBERON:0003075!9.44e-14!86;UBERON:0007284!9.44e-14!86;UBERON:0000956!1.47e-13!25;UBERON:0000203!1.47e-13!25;UBERON:0000924!8.33e-13!173;UBERON:0006601!8.33e-13!173;UBERON:0004121!3.09e-12!169;UBERON:0002619!6.70e-12!22;UBERON:0003056!2.89e-11!61;UBERON:0000153!4.94e-11!129;UBERON:0007811!4.94e-11!129;UBERON:0000033!6.31e-11!123;UBERON:0001950!1.14e-10!20;UBERON:0000025!4.06e-10!194;UBERON:0004111!6.65e-08!241;UBERON:0000119!3.23e-07!312;UBERON:0000483!6.71e-07!309;UBERON:0000477!8.48e-07!286 | |ontology_enrichment_uberon=UBERON:0001017!3.95e-28!82;UBERON:0000073!2.67e-26!94;UBERON:0001016!2.67e-26!94;UBERON:0005743!3.29e-26!86;UBERON:0000955!3.66e-20!69;UBERON:0006238!3.66e-20!69;UBERON:0001049!2.81e-18!57;UBERON:0005068!2.81e-18!57;UBERON:0006241!2.81e-18!57;UBERON:0007135!2.81e-18!57;UBERON:0002616!1.29e-16!59;UBERON:0001893!1.07e-15!34;UBERON:0002791!3.24e-15!33;UBERON:0002020!7.04e-15!34;UBERON:0003528!7.04e-15!34;UBERON:0001869!8.85e-15!32;UBERON:0002780!1.06e-14!41;UBERON:0001890!1.06e-14!41;UBERON:0006240!1.06e-14!41;UBERON:0002346!2.50e-14!90;UBERON:0003080!5.25e-14!42;UBERON:0007023!8.29e-14!115;UBERON:0003075!9.44e-14!86;UBERON:0007284!9.44e-14!86;UBERON:0000956!1.47e-13!25;UBERON:0000203!1.47e-13!25;UBERON:0000924!8.33e-13!173;UBERON:0006601!8.33e-13!173;UBERON:0004121!3.09e-12!169;UBERON:0002619!6.70e-12!22;UBERON:0003056!2.89e-11!61;UBERON:0000153!4.94e-11!129;UBERON:0007811!4.94e-11!129;UBERON:0000033!6.31e-11!123;UBERON:0001950!1.14e-10!20;UBERON:0000025!4.06e-10!194;UBERON:0004111!6.65e-08!241;UBERON:0000119!3.23e-07!312;UBERON:0000483!6.71e-07!309;UBERON:0000477!8.48e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.33e-12;25!UBERON:0000203;8.33e-12;25!UBERON:0002619;3.54e-11;22!UBERON:0001950;4.02e-10;20!UBERON:0002791;3.16e-08;32!UBERON:0001869;3.34e-08;32!UBERON:0001893;2.04e-07;34!UBERON:0001871;3.94e-07;6!UBERON:0003528;4.34e-07;34!UBERON:0002020;4.34e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.54e-17,81;UBERON:0001016,1.19e-16,89;UBERON:0000956,1.13e-11,25;UBERON:0000203,1.13e-11,25;UBERON:0002619,4.81e-11,22;UBERON:0001950,6.10e-10,20;UBERON:0000955,3.18e-09,68;UBERON:0006238,3.18e-09,68;UBERON:0002791,1.06e-08,32;UBERON:0001869,1.06e-08,32;UBERON:0003528,4.51e-08,34;UBERON:0002020,4.51e-08,34;UBERON:0001893,4.51e-08,34;UBERON:0004121,8.35e-08,171;UBERON:0000924,8.35e-08,171;UBERON:0006601,8.35e-08,171;UBERON:0002780,1.33e-07,41;UBERON:0001890,1.33e-07,41;UBERON:0003080,1.33e-07,41;UBERON:0006240,1.33e-07,41;UBERON:0000073,1.61e-07,53;UBERON:0002616,1.61e-07,53;UBERON:0001871,3.48e-07,6;UBERON:0001049,5.76e-07,56;UBERON:0005068,5.76e-07,56;UBERON:0006241,5.76e-07,56;UBERON:0007135,5.76e-07,56 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,2.01697543935533,1.20538905604795,0,0,0.861847406537515,0,0,2.28988789704845,0.821246550437305,0.502170558379211,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0,1.5905718941022,0,1.03988298880475,0.221729397462564,0.614843499851882,0.261958150995425,0.364295288292542,0,0,0,0,7.15471872916026,7.43593384014166,12.2580975438756,0.993812036833525,0,1.04142150482278,1.69592382577203,0,1.37559020970034,0.417989933073621,0.775250277507987,1.06729878806013,1.00416183829401,0.805658634218294,0,0.24406205754817,0.367663080345869,3.24056779152704,0.714397826272638,0.44905874525234,1.23872628531654,0,0,1.09921046358244,0,0,0,0.496971951695318,0.379891534993739,0,0,0,0,0,0,0.933633106199299,0.942974704487816,0.653847612453835,0.605429710579726,1.15235184896,0,0,0,0,0.352303495931295,0.323745888736263,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0.506328996723799,0.487185025805993,0.252433774244115,0.460249493211497,0,0,0.302256294682921,0,0,0,0,0.243947412259191,0.795178609928912,0.348581828608555,1.0366105501537,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.577465791044295,0,0.951270761172991,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.358121926479791,0,0.197030760201927,0,0,1.52456774533478,3.90419561572865,4.63973287666617,3.68535783735567,6.37938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,1.32845119707087,0.368738337083406,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0.992431231275107,0.306923946576125,0.841980283299221,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0,0.364182336013434,0,0,0.15403067420883,0,0,0,0,0.850468526382578,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0.290012154876366,0.616194468458578,0.307007349452259,0.551346289938122,0.644521469209642,0.290033387828457,0.426133137080504,0.623224249527161,0,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0.557409525377156,1.15415370381156,0.0711418433484141,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,2.46174797895425,0,0.33307196799782,0,0,0.586032717087576,0,0,0,0,0.593929361665277,0.307160702099232,2.98244294329889,0.984685914873589,0,0.329607748453519,0.211125408127993,0.597743964753209,0.276283915531148,0,1.73856760253663,0,0,0,0,0,0.197286811273867,0,0,0,1.20598527610407,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0.482385754501632,1.52581736317083,0.884634079449797,1.18219047581419,1.31631238292384,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0.189753732724185,0.317873157960757,0,0,0,8.00637967045737,0,0.176915129006678,0,0,0.247127877893006,0.208843899010911,0.943615861729479,1.60515529459758,1.1713222286267,1.094728735294,0,0,0,0,9.1821828489147,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0.0882561266915003,0.677942222341597,0,0.19871461170299,1.13959432720582,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0,0,0,0.407712618220842,0.941425616810999,0.203996435272644,0.288950589901519,0.600420288709789,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,1.49823746722733,0.643012593860077,1.10031549277787,2.07720169014593,0.2249738915515,0,0.668245123238271,0,0,0.262272940674991,0.105600336519406,0.179287339332845,0,2.1440859791201,1.32418394073086,0,0,0,0.326587360109409,0,0.574647645245373,0.851940108927109,0.113312091520126,0.293104467356165,0,0.258565912723101,0.26446520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| ||
|short_description=p26@TCF4 | |short_description=p26@TCF4 | ||
}} | }} |
Latest revision as of 21:25, 19 September 2015
Short description: | p26@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENST00000537578, NM_001243227, NM_001243228, uc010dpi.2, uc010xdy.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B7Z5M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.23e-18 | 8 |
neuron | 5.62e-13 | 6 |
neuroblast | 5.62e-13 | 6 |
electrically signaling cell | 5.62e-13 | 6 |
plasmacytoid dendritic cell | 9.06e-11 | 3 |
neural cell | 1.55e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.54e-17 | 81 |
nervous system | 1.19e-16 | 89 |
cerebral cortex | 1.13e-11 | 25 |
pallium | 1.13e-11 | 25 |
regional part of cerebral cortex | 4.81e-11 | 22 |
neocortex | 6.10e-10 | 20 |
brain | 3.18e-09 | 68 |
future brain | 3.18e-09 | 68 |
regional part of telencephalon | 1.06e-08 | 32 |
cerebral hemisphere | 1.06e-08 | 32 |
brain grey matter | 4.51e-08 | 34 |
gray matter | 4.51e-08 | 34 |
telencephalon | 4.51e-08 | 34 |
ectoderm-derived structure | 8.35e-08 | 171 |
ectoderm | 8.35e-08 | 171 |
presumptive ectoderm | 8.35e-08 | 171 |
regional part of forebrain | 1.33e-07 | 41 |
forebrain | 1.33e-07 | 41 |
anterior neural tube | 1.33e-07 | 41 |
future forebrain | 1.33e-07 | 41 |
regional part of nervous system | 1.61e-07 | 53 |
regional part of brain | 1.61e-07 | 53 |
temporal lobe | 3.48e-07 | 6 |
neural tube | 5.76e-07 | 56 |
neural rod | 5.76e-07 | 56 |
future spinal cord | 5.76e-07 | 56 |
neural keel | 5.76e-07 | 56 |