FFCP PHASE1:Hg19::chr8:86132760..86132834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=377677 | |EntrezGene=377677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14914 | |HGNC=14914 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000517831_5end | |association_with_transcript=0bp_to_ENST00000517831_5end | ||
|cluster_id=chr8:86132760..86132834,+ | |||
|description=CAGE_peak_3_at_CA13_5end | |description=CAGE_peak_3_at_CA13_5end | ||
|id=chr8:86132760..86132834,+ | |id=chr8:86132760..86132834,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.08e-14!53;CL:0000051!1.08e-14!53;CL:0000838!4.10e-14!52;CL:0000945!2.13e-09!24;CL:0000826!2.13e-09!24;CL:0000738!1.10e-08!140;CL:0002087!2.70e-08!119;CL:0000236!2.75e-08!14;CL:0000037!1.26e-07!172;CL:0000566!1.26e-07!172;CL:0002031!2.13e-07!124;CL:0000988!9.43e-07!182 | |ontology_enrichment_celltype=CL:0000542!1.08e-14!53;CL:0000051!1.08e-14!53;CL:0000838!4.10e-14!52;CL:0000945!2.13e-09!24;CL:0000826!2.13e-09!24;CL:0000738!1.10e-08!140;CL:0002087!2.70e-08!119;CL:0000236!2.75e-08!14;CL:0000037!1.26e-07!172;CL:0000566!1.26e-07!172;CL:0002031!2.13e-07!124;CL:0000988!9.43e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.34e-10;24!CL:0000236;7.27e-10;13!CL:0000542;3.48e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.47e-15,53;CL:0000051,2.47e-15,53;CL:0000838,1.47e-14,52;CL:0000945,1.25e-10,24;CL:0000826,1.25e-10,24;CL:0000236,1.92e-10,14 | |||
|ontology_enrichment_development_v019=CL:0000051;3.48e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-18!115;UBERON:0001049!7.91e-12!57;UBERON:0005068!7.91e-12!57;UBERON:0006241!7.91e-12!57;UBERON:0007135!7.91e-12!57;UBERON:0003080!1.45e-10!42;UBERON:0002780!4.15e-10!41;UBERON:0001890!4.15e-10!41;UBERON:0006240!4.15e-10!41;UBERON:0001017!1.17e-09!82;UBERON:0002616!1.47e-09!59;UBERON:0000955!1.71e-09!69;UBERON:0006238!1.71e-09!69;UBERON:0005743!2.03e-09!86;UBERON:0000956!2.85e-08!25;UBERON:0000203!2.85e-08!25;UBERON:0000073!6.78e-08!94;UBERON:0001016!6.78e-08!94;UBERON:0000153!9.75e-08!129;UBERON:0007811!9.75e-08!129;UBERON:0003056!1.18e-07!61;UBERON:0002346!1.30e-07!90;UBERON:0001893!1.38e-07!34;UBERON:0001869!1.64e-07!32;UBERON:0003075!1.86e-07!86;UBERON:0007284!1.86e-07!86;UBERON:0002791!3.05e-07!33;UBERON:0002619!3.44e-07!22;UBERON:0002020!3.49e-07!34;UBERON:0003528!3.49e-07!34;UBERON:0001950!9.88e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!1.54e-18!115;UBERON:0001049!7.91e-12!57;UBERON:0005068!7.91e-12!57;UBERON:0006241!7.91e-12!57;UBERON:0007135!7.91e-12!57;UBERON:0003080!1.45e-10!42;UBERON:0002780!4.15e-10!41;UBERON:0001890!4.15e-10!41;UBERON:0006240!4.15e-10!41;UBERON:0001017!1.17e-09!82;UBERON:0002616!1.47e-09!59;UBERON:0000955!1.71e-09!69;UBERON:0006238!1.71e-09!69;UBERON:0005743!2.03e-09!86;UBERON:0000956!2.85e-08!25;UBERON:0000203!2.85e-08!25;UBERON:0000073!6.78e-08!94;UBERON:0001016!6.78e-08!94;UBERON:0000153!9.75e-08!129;UBERON:0007811!9.75e-08!129;UBERON:0003056!1.18e-07!61;UBERON:0002346!1.30e-07!90;UBERON:0001893!1.38e-07!34;UBERON:0001869!1.64e-07!32;UBERON:0003075!1.86e-07!86;UBERON:0007284!1.86e-07!86;UBERON:0002791!3.05e-07!33;UBERON:0002619!3.44e-07!22;UBERON:0002020!3.49e-07!34;UBERON:0003528!3.49e-07!34;UBERON:0001950!9.88e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.56e-11;25!UBERON:0000203;3.56e-11;25!UBERON:0001950;1.37e-09;20!UBERON:0002619;1.59e-09;22!UBERON:0001869;3.85e-09;32!UBERON:0002791;2.96e-08;32!UBERON:0001893;4.25e-08;34!UBERON:0002780;4.65e-08;41!UBERON:0001890;4.65e-08;41!UBERON:0003528;2.20e-07;34!UBERON:0002020;2.20e-07;34!UBERON:0000073;7.83e-07;53!UBERON:0002616;7.83e-07;53 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,1.09220686065086,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,2.57612388417951,1.36874425072884,2.13422487311165,1.52826811495903,1.39571002064908,2.51874500203774,2.36018566109342,0.767658796194425,1.08371286321253,1.83884244895785,0,0.739508020333575,2.78881922089086,3.83856927716038,4.11040615068786,0,0.401088894940283,1.30206522429511,0.671746422719773,0.32389366601898,0.77272670290256,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.47296445977717,0,0,1.35426486594342,0,0.272906150057846,0.449446968890169,0,0,0.639337125799041,0.989553900560148,0.398927315243264,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,0.868755378820466,1.81619850790011,0.736555271975129,0,0.422510572623884,0,0.628975936525128,0.22465726229299,0.300353785683013,0.64290234678832,0.285012743741249,0.59675003159727,0.182664153764634,3.51992488922645,11.4689108365048,5.33705552318133,7.25441378363062,8.40831572775626,5.17277195959035,9.25462821898807,10.494591299889,7.96898156753228,3.52342313622563,4.58727873750275,2.64342657158052,3.36305137788922,1.31692042387539,1.37696839079683,1.17903228824749,2.2616164889946,4.01247588937627,1.30368906653436,1.89379122293893,1.94826728407911,1.44833593950726,2.94605907474837,2.43687284041983,2.97884250141517,1.79327847615945,1.43065282315866,1.47994114143309,1.38175008892924,0.579606171470105,1.33457906845854,1.33770414044857,3.1360657141493,1.0197840842781,0.383220493601921,0.68725489096526,1.26509846009751,1.59282707162048,1.95325036156926,0,1.80690142893327,2.43174561193395,2.49861453104692,3.55165878066025,0.821127996921047,0.604820229674197,2.40696176205157,0.724122019413995,0,0,0.12786256184353,0,0,0,0,0,1.13441780596881,0.886917589850256,0.790513071238134,3.27447688744282,0.364295288292542,0.741568885568859,0.324547393654683,0,0.26591592103773,2.14641561874808,1.71598473234038,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.366403487860815,0,0,1.3082821564276,0,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0,0.427114777637135,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,1.15956511897978,1.09098448236334,0.860413786167011,0.975789649036763,0.927708378250397,0.813357600086629,1.34759371519982,0.756962552626885,1.82488679537915,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,7.60530208930985,0,1.77236972004421,1.32438929824395,3.44367627920718,0.514703430895577,0.439001141634502,0,1.3068766413512,1.11106134190236,0,0,1.44331342025273,0.579652024875384,0.234817388471643,0,0,0,0,0.858486162094873,0.738651018262192,0.234004265139238,0.594524649154913,1.87467667973554,0.839910640994298,0.850650583454319,0.895585227028483,2.03443756959773,1.91691339582606,0.492663237895943,0.528290604079356,0.621984346622316,0.864719720501769,0.37872730027914,0.380987365753014,0,0,0,0.719792448923265,0,0.285826432630578,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0.399891964728228,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0.179060963239896,0.784596007954691,3.54655368363469,2.58753089831421,2.95188983443421,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,2.48121631347465,1.50999940573032,0.960548020230999,0,0,0.604780586659361,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0,0,0,1.32945394550784,1.20303882181971,0.736647911487171,0.114814448164607,0,0,0,1.00119938235739,0,0,1.37217117560738,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,1.27438136522519,1.66215201785745,0.447749509444357,0.219259876645935,0,0.256450125116389,0,0.650756789328606,3.709476419318,0.54941678891006,0.742585499285292,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,1.32227932288782,0.960950336825531,4.33883222481586,1.11273558941105,0,0,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0.769776901804097,0.670302275535787,2.17781969722645,3.29503302718727,0,0,0,0,2.53723804616085,1.52927441428475,2.84823593587081,2.1440859791201,0,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0.490080431962063,5.75989842889728,0.28853842595289,4.5530779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| ||
|short_description=p3@CA13 | |short_description=p3@CA13 | ||
}} | }} |
Latest revision as of 07:43, 19 September 2015
Short description: | p3@CA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CA13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517831_5end |
EntrezGene: | CA13 |
HGNC: | 14914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.47e-15 | 53 |
common lymphoid progenitor | 2.47e-15 | 53 |
lymphoid lineage restricted progenitor cell | 1.47e-14 | 52 |
lymphocyte of B lineage | 1.25e-10 | 24 |
pro-B cell | 1.25e-10 | 24 |
B cell | 1.92e-10 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.83e-17 | 114 |
cerebral cortex | 9.95e-12 | 25 |
pallium | 9.95e-12 | 25 |
regional part of forebrain | 1.26e-11 | 41 |
forebrain | 1.26e-11 | 41 |
anterior neural tube | 1.26e-11 | 41 |
future forebrain | 1.26e-11 | 41 |
regional part of nervous system | 1.63e-11 | 53 |
regional part of brain | 1.63e-11 | 53 |
neural tube | 3.94e-11 | 56 |
neural rod | 3.94e-11 | 56 |
future spinal cord | 3.94e-11 | 56 |
neural keel | 3.94e-11 | 56 |
cerebral hemisphere | 2.58e-10 | 32 |
neocortex | 3.23e-10 | 20 |
regional part of cerebral cortex | 4.10e-10 | 22 |
telencephalon | 2.82e-09 | 34 |
regional part of telencephalon | 2.84e-09 | 32 |
brain grey matter | 2.53e-08 | 34 |
gray matter | 2.53e-08 | 34 |
brain | 8.56e-08 | 68 |
future brain | 8.56e-08 | 68 |
organ system subdivision | 1.27e-07 | 223 |
central nervous system | 1.86e-07 | 81 |