FFCP PHASE1:Hg19::chr1:212003470..212003501,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:212003470..212003501,-
|short_description=p13@LPGAT1
|description=CAGE_peak_13_at_LPGAT1_5end
|association_with_transcript=75bp_to_uc001hiu.2_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9926 | |EntrezGene=9926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28985 | |HGNC=28985 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_uc001hiu.2_5end | |||
|cluster_id=chr1:212003470..212003501,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_13_at_LPGAT1_5end | |||
|id=chr1:212003470..212003501,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;1.11e-25;1!CL:0000775;1.54e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,9.79e-26,1;CL:0000775,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.11e-25;1!UBERON:0009117;4.89e-11;10!UBERON:0005564;4.89e-11;10!UBERON:0003056;1.74e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.45e-17!57;UBERON:0005068!1.45e-17!57;UBERON:0006241!1.45e-17!57;UBERON:0007135!1.45e-17!57;UBERON:0002780!4.73e-17!41;UBERON:0001890!4.73e-17!41;UBERON:0006240!4.73e-17!41;UBERON:0003080!1.82e-16!42;UBERON:0003075!8.72e-16!86;UBERON:0007284!8.72e-16!86;UBERON:0007023!1.22e-14!115;UBERON:0002346!1.42e-14!90;UBERON:0003056!1.86e-14!61;UBERON:0001893!2.80e-14!34;UBERON:0002616!4.00e-14!59;UBERON:0001869!8.50e-14!32;UBERON:0002791!3.79e-13!33;UBERON:0002020!1.48e-12!34;UBERON:0003528!1.48e-12!34;UBERON:0002619!5.03e-12!22;UBERON:0000073!5.75e-12!94;UBERON:0001016!5.75e-12!94;UBERON:0001017!9.91e-12!82;UBERON:0000955!1.42e-11!69;UBERON:0006238!1.42e-11!69;UBERON:0005743!1.46e-11!86;UBERON:0000956!1.61e-11!25;UBERON:0000203!1.61e-11!25;UBERON:0001950!1.62e-11!20;UBERON:0000033!2.56e-07!123;UBERON:0004121!5.18e-07!169;UBERON:0000200!8.40e-07!6;UBERON:0000488!9.97e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.53e-50;2!UBERON:0002757;3.53e-50;2!UBERON:0010134;3.53e-50;2!UBERON:0005408;3.53e-50;2!UBERON:0001899;3.53e-50;2!UBERON:0003296;1.05e-25;4!UBERON:0010133;1.05e-25;4!UBERON:0002784;1.05e-25;4!UBERON:0000941;1.11e-25;1!UBERON:0001785;1.11e-25;1!UBERON:0002464;1.11e-25;1!UBERON:0004904;1.11e-25;1!UBERON:0001021;1.11e-25;1!UBERON:0001894;3.66e-15;7!UBERON:0003714;1.46e-13;2!UBERON:0005162;1.46e-13;2!UBERON:0000122;1.46e-13;2!UBERON:0005406;1.46e-13;2!UBERON:0000473;1.51e-13;8!UBERON:0003135;4.03e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.11e-50,2;UBERON:0002757,3.11e-50,2;UBERON:0010134,3.11e-50,2;UBERON:0005408,3.11e-50,2;UBERON:0001899,3.11e-50,2;UBERON:0003296,9.82e-26,4;UBERON:0010133,9.82e-26,4;UBERON:0002784,9.82e-26,4;UBERON:0000941,1.26e-25,1;UBERON:0001785,1.26e-25,1;UBERON:0002464,1.26e-25,1;UBERON:0004904,1.26e-25,1;UBERON:0001021,1.26e-25,1;UBERON:0003902,1.26e-25,1;UBERON:0005425,1.26e-25,1;UBERON:0001894,3.53e-15,7;UBERON:0006222,3.53e-15,7;UBERON:0005406,1.37e-13,2;UBERON:0000473,1.51e-13,8;UBERON:0003714,1.55e-13,2;UBERON:0005162,1.55e-13,2;UBERON:0000122,1.55e-13,2;UBERON:0003135,4.03e-10,11;UBERON:0001781,2.04e-07,4 | |||
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| ||
|short_description=p13@LPGAT1 | |||
}} | }} |
Latest revision as of 23:15, 24 September 2015
Short description: | p13@LPGAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LPGAT1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 75bp_to_uc001hiu.2_5end |
EntrezGene: | LPGAT1 |
HGNC: | 28985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 9.79e-26 | 1 |
neutrophil | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.11e-50 | 2 |
regional part of epithalamus | 3.11e-50 | 2 |
secretory circumventricular organ | 3.11e-50 | 2 |
circumventricular organ | 3.11e-50 | 2 |
epithalamus | 3.11e-50 | 2 |
gland of diencephalon | 9.82e-26 | 4 |
neuroendocrine gland | 9.82e-26 | 4 |
regional part of diencephalon | 9.82e-26 | 4 |
cranial nerve II | 1.26e-25 | 1 |
cranial nerve | 1.26e-25 | 1 |
nerve trunk | 1.26e-25 | 1 |
nerve connecting eye with brain | 1.26e-25 | 1 |
nerve | 1.26e-25 | 1 |
retinal neural layer | 1.26e-25 | 1 |
presumptive neural retina | 1.26e-25 | 1 |
diencephalon | 3.53e-15 | 7 |
future diencephalon | 3.53e-15 | 7 |
perirenal fat | 1.37e-13 | 2 |
testis | 1.51e-13 | 8 |
neural tissue | 1.55e-13 | 2 |
multi cell component structure | 1.55e-13 | 2 |
neuron projection bundle | 1.55e-13 | 2 |
male reproductive organ | 4.03e-10 | 11 |
layer of retina | 2.04e-07 | 4 |