FFCP PHASE1:Hg19::chr10:120145602..120145605,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:120145602..120145605,+ | |||
|description=CAGE_peak_at_chr10:120145602..120145605,+ | |description=CAGE_peak_at_chr10:120145602..120145605,+ | ||
|id=chr10:120145602..120145605,+ | |id=chr10:120145602..120145605,+ | ||
|ontology_enrichment_celltype=CL:0000242!1.60e-16!2;CL:0000167!1.60e-09!1;CL:0000164!1.60e-09!1;CL:0000502!1.60e-09!1;CL:0000172!1.60e-09!1;CL:0000173!1.60e-09!1;CL:0002351!1.60e-09!1;CL:0000047!2.13e-09!8;CL:0000342!4.91e-09!1;CL:0002565!4.91e-09!1;CL:0000163!1.71e-08!9;CL:0002274!3.46e-07!5;CL:0000457!3.46e-07!5;CL:0002191!3.46e-07!5;CL:0000097!3.46e-07!5;CL:0000831!3.46e-07!5;CL:0002028!3.46e-07!5;CL:0000312!3.92e-07!5;CL:0002319!4.52e-07!25 | |ontology_enrichment_celltype=CL:0000242!1.60e-16!2;CL:0000167!1.60e-09!1;CL:0000164!1.60e-09!1;CL:0000502!1.60e-09!1;CL:0000172!1.60e-09!1;CL:0000173!1.60e-09!1;CL:0002351!1.60e-09!1;CL:0000047!2.13e-09!8;CL:0000342!4.91e-09!1;CL:0002565!4.91e-09!1;CL:0000163!1.71e-08!9;CL:0002274!3.46e-07!5;CL:0000457!3.46e-07!5;CL:0002191!3.46e-07!5;CL:0000097!3.46e-07!5;CL:0000831!3.46e-07!5;CL:0002028!3.46e-07!5;CL:0000312!3.92e-07!5;CL:0002319!4.52e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.84e-34;1!CL:0000164;1.84e-34;1!CL:0000502;1.84e-34;1!CL:0000172;1.84e-34;1!CL:0000173;1.84e-34;1!CL:0000047;9.07e-18;2!CL:0000123;9.07e-18;2!CL:0000242;9.07e-18;2!CL:0000312;6.55e-08;5!CL:0000240;8.48e-07;6!CL:0000311;8.48e-07;6!CL:0000079;8.48e-07;6!CL:0000237;8.48e-07;6!CL:0002548;8.48e-07;6 | |ontology_enrichment_celltype_v019=CL:0000167;1.84e-34;1!CL:0000164;1.84e-34;1!CL:0000502;1.84e-34;1!CL:0000172;1.84e-34;1!CL:0000173;1.84e-34;1!CL:0000047;9.07e-18;2!CL:0000123;9.07e-18;2!CL:0000242;9.07e-18;2!CL:0000312;6.55e-08;5!CL:0000240;8.48e-07;6!CL:0000311;8.48e-07;6!CL:0000079;8.48e-07;6!CL:0000237;8.48e-07;6!CL:0002548;8.48e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.84e-34,1;CL:0000164,1.84e-34,1;CL:0000502,1.84e-34,1;CL:0000172,1.84e-34,1;CL:0000173,1.84e-34,1;CL:0002351,1.84e-34,1;CL:0000242,9.07e-18,2;CL:0000312,6.55e-08,5;CL:0000240,8.48e-07,6;CL:0000311,8.48e-07,6;CL:0000079,8.48e-07,6;CL:0000237,8.48e-07,6;CL:0000036,8.48e-07,6;CL:0000357,8.48e-07,6;CL:0000114,8.48e-07,6;CL:0002548,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002351;1.84e-34;1!UBERON:0005062;1.44e-09;4!UBERON:0007284;1.44e-09;4!CL:0000357;8.48e-07;6!CL:0000114;8.48e-07;6 | |ontology_enrichment_development_v019=CL:0002351;1.84e-34;1!UBERON:0005062;1.44e-09;4!UBERON:0007284;1.44e-09;4!CL:0000357;8.48e-07;6!CL:0000114;8.48e-07;6 | ||
|ontology_enrichment_disease=DOID:4430!1.60e-09!1 | |ontology_enrichment_disease=DOID:4430!1.60e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.84e-34;1!DOID:5409;1.44e-09;4!DOID:169;7.17e-07;6 | |ontology_enrichment_disease_v019=DOID:4430;1.84e-34;1!DOID:5409;1.44e-09;4!DOID:169;7.17e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,1.84e-34,1;DOID:5409,1.22e-09,4;DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002134!1.89e-09!1;UBERON:0005208!1.89e-09!1;UBERON:0005946!1.89e-09!1;UBERON:0005965!1.89e-09!1;UBERON:0002078!1.89e-09!1;UBERON:0001301!3.05e-09!1;UBERON:0002506!4.91e-09!1;UBERON:0001769!4.91e-09!1;UBERON:0001874!6.72e-09!1 | |ontology_enrichment_uberon=UBERON:0002134!1.89e-09!1;UBERON:0005208!1.89e-09!1;UBERON:0005946!1.89e-09!1;UBERON:0005965!1.89e-09!1;UBERON:0002078!1.89e-09!1;UBERON:0001301!3.05e-09!1;UBERON:0002506!4.91e-09!1;UBERON:0001769!4.91e-09!1;UBERON:0001874!6.72e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.05e-34;1!UBERON:0005208;5.05e-34;1!UBERON:0004145;5.05e-34;1!UBERON:0005946;5.05e-34;1!UBERON:0005965;5.05e-34;1!UBERON:0002078;5.05e-34;1!UBERON:0002081;9.07e-18;2!UBERON:0002133;9.07e-18;2!UBERON:0003978;2.59e-12;3!UBERON:0004151;2.59e-12;3!UBERON:0000946;2.59e-12;3!UBERON:0000948;5.57e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002134;5.05e-34;1!UBERON:0005208;5.05e-34;1!UBERON:0004145;5.05e-34;1!UBERON:0005946;5.05e-34;1!UBERON:0005965;5.05e-34;1!UBERON:0002078;5.05e-34;1!UBERON:0002081;9.07e-18;2!UBERON:0002133;9.07e-18;2!UBERON:0003978;2.59e-12;3!UBERON:0004151;2.59e-12;3!UBERON:0000946;2.59e-12;3!UBERON:0000948;5.57e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.61e-34,1;UBERON:0005208,3.61e-34,1;UBERON:0005946,3.61e-34,1;UBERON:0005965,3.61e-34,1;UBERON:0002078,3.61e-34,1;UBERON:0002081,7.67e-18,2;UBERON:0002133,7.67e-18,2;UBERON:0010227,7.67e-18,2;UBERON:0003978,2.31e-12,3;UBERON:0009751,2.31e-12,3;UBERON:0004151,2.31e-12,3;UBERON:0000946,2.31e-12,3;UBERON:0002523,2.31e-12,3;UBERON:0005983,2.31e-12,3;UBERON:0004145,2.31e-12,3;UBERON:0002165,2.31e-12,3;UBERON:0002062,2.31e-12,3;UBERON:0007280,2.31e-12,3 | |||
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|short_description=p@chr10:120145602..120145605,+ | |short_description=p@chr10:120145602..120145605,+ | ||
}} | }} |
Latest revision as of 10:54, 23 July 2015
Short description: | p@chr10:120145602..120145605, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:120145602..120145605, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.84e-34 | 1 |
enteroendocrine cell | 1.84e-34 | 1 |
type D enteroendocrine cell | 1.84e-34 | 1 |
somatostatin secreting cell | 1.84e-34 | 1 |
pancreatic D cell | 1.84e-34 | 1 |
progenitor cell of endocrine pancreas | 1.84e-34 | 1 |
Merkel cell | 9.07e-18 | 2 |
keratinocyte | 6.55e-08 | 5 |
stratified squamous epithelial cell | 8.48e-07 | 6 |
keratin accumulating cell | 8.48e-07 | 6 |
stratified epithelial cell | 8.48e-07 | 6 |
keratinizing barrier epithelial cell | 8.48e-07 | 6 |
epithelial fate stem cell | 8.48e-07 | 6 |
stratified epithelial stem cell | 8.48e-07 | 6 |
surface ectodermal cell | 8.48e-07 | 6 |
cardiac fibroblast | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 3.61e-34 | 1 |
right atrium valve | 3.61e-34 | 1 |
outflow tract of atrium | 3.61e-34 | 1 |
outflow part of right atrium | 3.61e-34 | 1 |
right cardiac atrium | 3.61e-34 | 1 |
cardiac atrium | 7.67e-18 | 2 |
atrioventricular valve | 7.67e-18 | 2 |
future cardiac atrium | 7.67e-18 | 2 |
valve | 2.31e-12 | 3 |
cardiac mesenchyme | 2.31e-12 | 3 |
cardiac chamber | 2.31e-12 | 3 |
cardial valve | 2.31e-12 | 3 |
tunica intima | 2.31e-12 | 3 |
heart layer | 2.31e-12 | 3 |
outflow tract | 2.31e-12 | 3 |
endocardium | 2.31e-12 | 3 |
endocardial cushion | 2.31e-12 | 3 |
presumptive endocardium | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.84e-34 | 1 |
lung small cell carcinoma | 1.22e-09 | 4 |
neuroendocrine tumor | 7.17e-07 | 6 |