FFCP PHASE1:Hg19::chr11:102668166..102668181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4312 | |EntrezGene=4312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7155 | |HGNC=7155 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_AK225495_5end | |association_with_transcript=-14bp_to_AK225495_5end | ||
|cluster_id=chr11:102668166..102668181,- | |||
|coexpression_cluster_id=C422 | |coexpression_cluster_id=C422 | ||
|description=CAGE_peak_10_at_MMP1_5end | |description=CAGE_peak_10_at_MMP1_5end | ||
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|ontology_enrichment_celltype=CL:0000359!1.35e-21!32;CL:0000192!4.65e-20!42;CL:0000514!4.65e-20!42;CL:0000187!1.09e-16!54;CL:0000183!4.94e-16!59;CL:0000055!5.63e-16!180;CL:0000680!2.04e-15!57;CL:0000056!2.04e-15!57;CL:0000355!2.04e-15!57;CL:0000393!2.82e-14!60;CL:0000211!2.82e-14!60;CL:0000222!1.72e-13!119;CL:0002139!9.02e-11!24;CL:1000413!7.79e-10!9;CL:0002539!2.81e-09!10;CL:0002594!6.19e-09!4;CL:0000220!6.51e-09!246;CL:0002494!7.89e-09!16;CL:1000306!8.34e-09!4;CL:0002547!8.34e-09!4;CL:0000071!9.78e-09!18;CL:0002546!9.78e-09!18;CL:0002321!9.79e-09!248;CL:0002595!1.11e-07!5;CL:0002592!1.32e-07!3;CL:0000057!1.37e-07!75;CL:0002551!1.96e-07!6;CL:0002371!3.00e-07!591;CL:0000548!9.72e-07!679;CL:0000004!9.72e-07!679;CL:0000255!9.72e-07!679 | |ontology_enrichment_celltype=CL:0000359!1.35e-21!32;CL:0000192!4.65e-20!42;CL:0000514!4.65e-20!42;CL:0000187!1.09e-16!54;CL:0000183!4.94e-16!59;CL:0000055!5.63e-16!180;CL:0000680!2.04e-15!57;CL:0000056!2.04e-15!57;CL:0000355!2.04e-15!57;CL:0000393!2.82e-14!60;CL:0000211!2.82e-14!60;CL:0000222!1.72e-13!119;CL:0002139!9.02e-11!24;CL:1000413!7.79e-10!9;CL:0002539!2.81e-09!10;CL:0002594!6.19e-09!4;CL:0000220!6.51e-09!246;CL:0002494!7.89e-09!16;CL:1000306!8.34e-09!4;CL:0002547!8.34e-09!4;CL:0000071!9.78e-09!18;CL:0002546!9.78e-09!18;CL:0002321!9.79e-09!248;CL:0002595!1.11e-07!5;CL:0002592!1.32e-07!3;CL:0000057!1.37e-07!75;CL:0002551!1.96e-07!6;CL:0002371!3.00e-07!591;CL:0000548!9.72e-07!679;CL:0000004!9.72e-07!679;CL:0000255!9.72e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.07e-35;32!CL:0000192;2.97e-21;43!CL:0002595;2.75e-19;5!CL:0002592;2.30e-18;3!CL:0000569;1.70e-13;4!CL:1000306;2.93e-13;4!CL:0002547;2.93e-13;4!CL:0002594;5.26e-13;4!CL:0002593;7.87e-13;2!CL:0002494;1.50e-12;16!CL:0000393;2.70e-11;61!CL:0000211;2.70e-11;61!CL:0000187;6.91e-11;55!CL:0002539;4.27e-09;10 | |ontology_enrichment_celltype_v019=CL:0000359;5.07e-35;32!CL:0000192;2.97e-21;43!CL:0002595;2.75e-19;5!CL:0002592;2.30e-18;3!CL:0000569;1.70e-13;4!CL:1000306;2.93e-13;4!CL:0002547;2.93e-13;4!CL:0002594;5.26e-13;4!CL:0002593;7.87e-13;2!CL:0002494;1.50e-12;16!CL:0000393;2.70e-11;61!CL:0000211;2.70e-11;61!CL:0000187;6.91e-11;55!CL:0002539;4.27e-09;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.29e-37,32;CL:0000192,1.52e-30,43;CL:0000514,1.52e-30,43;CL:0000187,4.02e-23,55;CL:0000680,9.54e-22,58;CL:0000056,9.54e-22,58;CL:0000355,9.54e-22,58;CL:0000393,1.66e-20,61;CL:0000211,1.66e-20,61;CL:0002595,2.76e-19,5;CL:0002592,2.45e-18,3;CL:0000222,2.38e-14,121;CL:1000306,2.28e-13,4;CL:0002547,2.28e-13,4;CL:0000569,2.38e-13,4;CL:0000011,2.38e-13,4;CL:0002594,2.59e-13,4;CL:0002593,8.36e-13,2;CL:0002494,1.80e-12,16;CL:0002321,1.10e-10,250;CL:0002539,4.37e-09,10;CL:0002379,8.98e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;2.97e-21;43!CL:0000011;1.70e-13;4!CL:0000355;6.01e-12;58 | |ontology_enrichment_development_v019=CL:0000514;2.97e-21;43!CL:0000011;1.70e-13;4!CL:0000355;6.01e-12;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;4.50e-07;1!DOID:2513;4.50e-07;1 | |ontology_enrichment_disease_v019=DOID:3112;4.50e-07;1!DOID:2513;4.50e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,3.57e-07,1;DOID:2513,4.78e-07,1;DOID:3620,8.98e-07,1;DOID:3565,8.98e-07,1 | |||
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|short_description=p10@MMP1 | |short_description=p10@MMP1 | ||
}} | }} |
Latest revision as of 18:26, 24 September 2015
Short description: | p10@MMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MMP1_5end |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | -14bp_to_AK225495_5end |
EntrezGene: | MMP1 |
HGNC: | 7155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.29e-37 | 32 |
smooth muscle cell | 1.52e-30 | 43 |
smooth muscle myoblast | 1.52e-30 | 43 |
muscle cell | 4.02e-23 | 55 |
muscle precursor cell | 9.54e-22 | 58 |
myoblast | 9.54e-22 | 58 |
multi-potent skeletal muscle stem cell | 9.54e-22 | 58 |
electrically responsive cell | 1.66e-20 | 61 |
electrically active cell | 1.66e-20 | 61 |
smooth muscle cell of the subclavian artery | 2.76e-19 | 5 |
smooth muscle cell of the coronary artery | 2.45e-18 | 3 |
mesodermal cell | 2.38e-14 | 121 |
fibroblast of tunica adventitia of artery | 2.28e-13 | 4 |
fibroblast of the aortic adventitia | 2.28e-13 | 4 |
cardiac mesenchymal cell | 2.38e-13 | 4 |
migratory trunk neural crest cell | 2.38e-13 | 4 |
smooth muscle cell of the umbilical artery | 2.59e-13 | 4 |
smooth muscle cell of the internal thoracic artery | 8.36e-13 | 2 |
cardiocyte | 1.80e-12 | 16 |
embryonic cell | 1.10e-10 | 250 |
aortic smooth muscle cell | 4.37e-09 | 10 |
meningothelial cell | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.57e-07 | 1 |
basal cell carcinoma | 4.78e-07 | 1 |
central nervous system cancer | 8.98e-07 | 1 |