FFCP PHASE1:Hg19::chr20:39317868..39317884,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9935 | |EntrezGene=9935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6408 | |HGNC=6408 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5Q3 | |UniProt=Q9Y5Q3 | ||
|association_with_transcript=0bp_to_ENST00000373313,NM_005461,uc002xji.2_5end | |association_with_transcript=0bp_to_ENST00000373313,NM_005461,uc002xji.2_5end | ||
|cluster_id=chr20:39317868..39317884,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_MAFB_5end | |description=CAGE_peak_1_at_MAFB_5end | ||
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|ontology_enrichment_celltype=CL:0002009!1.11e-27!65;CL:0002194!1.39e-27!63;CL:0000576!1.39e-27!63;CL:0000040!1.39e-27!63;CL:0000559!1.39e-27!63;CL:0002057!2.16e-27!42;CL:0000766!7.03e-26!76;CL:0000860!1.06e-25!45;CL:0000557!2.23e-23!71;CL:0000839!1.59e-22!70;CL:0000763!1.08e-07!112;CL:0000049!1.08e-07!112 | |ontology_enrichment_celltype=CL:0002009!1.11e-27!65;CL:0002194!1.39e-27!63;CL:0000576!1.39e-27!63;CL:0000040!1.39e-27!63;CL:0000559!1.39e-27!63;CL:0002057!2.16e-27!42;CL:0000766!7.03e-26!76;CL:0000860!1.06e-25!45;CL:0000557!2.23e-23!71;CL:0000839!1.59e-22!70;CL:0000763!1.08e-07!112;CL:0000049!1.08e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-20;33!CL:0002057;2.04e-20;33!CL:0000473;4.01e-20;39!CL:0000234;4.01e-20;39!CL:0000576;2.76e-17;48!CL:0000766;3.14e-12;69 | |ontology_enrichment_celltype_v019=CL:0000860;2.04e-20;33!CL:0002057;2.04e-20;33!CL:0000473;4.01e-20;39!CL:0000234;4.01e-20;39!CL:0000576;2.76e-17;48!CL:0000766;3.14e-12;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.62e-31,48;CL:0000234,3.62e-31,48;CL:0002009,9.70e-30,61;CL:0002194,1.07e-29,59;CL:0000576,1.07e-29,59;CL:0000040,1.07e-29,59;CL:0000559,1.07e-29,59;CL:0000860,1.41e-27,42;CL:0002057,1.41e-27,42;CL:0000766,2.33e-27,72;CL:0000557,6.63e-25,67;CL:0000839,1.14e-23,66;CL:0000763,2.07e-08,108;CL:0000049,2.07e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.06e-20;42 | |ontology_enrichment_development_v019=CL:0002057;5.06e-20;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.97e-22!115;UBERON:0002193!7.66e-22!112;UBERON:0002390!9.47e-22!102;UBERON:0003061!9.47e-22!102;UBERON:0001474!2.05e-20!86;UBERON:0002371!2.23e-20!80;UBERON:0002405!2.81e-18!115;UBERON:0004765!1.32e-17!101;UBERON:0001434!1.32e-17!101;UBERON:0000468!8.99e-17!659;UBERON:0000062!1.63e-13!511;UBERON:0000467!1.77e-13!625;UBERON:0000480!3.90e-13!626;UBERON:0000922!2.17e-12!612;UBERON:0002050!1.34e-11!605;UBERON:0005423!1.34e-11!605;UBERON:0000923!2.03e-11!604;UBERON:0005291!2.03e-11!604;UBERON:0006598!2.03e-11!604;UBERON:0002532!2.03e-11!604;UBERON:0000479!9.65e-08!787;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57;UBERON:0001017!4.87e-07!82;UBERON:0000924!7.05e-07!173;UBERON:0006601!7.05e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!5.97e-22!115;UBERON:0002193!7.66e-22!112;UBERON:0002390!9.47e-22!102;UBERON:0003061!9.47e-22!102;UBERON:0001474!2.05e-20!86;UBERON:0002371!2.23e-20!80;UBERON:0002405!2.81e-18!115;UBERON:0004765!1.32e-17!101;UBERON:0001434!1.32e-17!101;UBERON:0000468!8.99e-17!659;UBERON:0000062!1.63e-13!511;UBERON:0000467!1.77e-13!625;UBERON:0000480!3.90e-13!626;UBERON:0000922!2.17e-12!612;UBERON:0002050!1.34e-11!605;UBERON:0005423!1.34e-11!605;UBERON:0000923!2.03e-11!604;UBERON:0005291!2.03e-11!604;UBERON:0006598!2.03e-11!604;UBERON:0002532!2.03e-11!604;UBERON:0000479!9.65e-08!787;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57;UBERON:0001017!4.87e-07!82;UBERON:0000924!7.05e-07!173;UBERON:0006601!7.05e-07!173 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.70e-23,108;UBERON:0002390,4.72e-23,98;UBERON:0003061,4.72e-23,98;UBERON:0004765,2.84e-22,90;UBERON:0002371,9.39e-22,76;UBERON:0001474,1.03e-21,82;UBERON:0007023,1.17e-21,114;UBERON:0002405,1.15e-20,93;UBERON:0001434,6.15e-19,100;UBERON:0002050,2.54e-10,564;UBERON:0000923,9.33e-10,560;UBERON:0010316,9.33e-10,560;UBERON:0005291,9.33e-10,560;UBERON:0006598,9.33e-10,560;UBERON:0010317,9.33e-10,560;UBERON:0002532,9.33e-10,560;UBERON:0000922,1.16e-09,592;UBERON:0005423,7.50e-09,581;UBERON:0004121,3.31e-07,171;UBERON:0000924,3.31e-07,171;UBERON:0006601,3.31e-07,171;UBERON:0001049,5.47e-07,56;UBERON:0005068,5.47e-07,56;UBERON:0006241,5.47e-07,56;UBERON:0007135,5.47e-07,56;UBERON:0003081,6.52e-07,203;UBERON:0001017,6.60e-07,81 | |||
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| ||
|short_description=p1@MAFB | |short_description=p1@MAFB | ||
}} | }} |
Latest revision as of 05:11, 16 September 2015
Short description: | p1@MAFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAFB_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000373313, NM_005461, uc002xji.2_5end |
EntrezGene: | MAFB |
HGNC: | 6408 |
UniProt: | Q9Y5Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.62e-31 | 48 |
phagocyte | 3.62e-31 | 48 |
macrophage dendritic cell progenitor | 9.70e-30 | 61 |
monopoietic cell | 1.07e-29 | 59 |
monocyte | 1.07e-29 | 59 |
monoblast | 1.07e-29 | 59 |
promonocyte | 1.07e-29 | 59 |
classical monocyte | 1.41e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-27 | 42 |
myeloid leukocyte | 2.33e-27 | 72 |
granulocyte monocyte progenitor cell | 6.63e-25 | 67 |
myeloid lineage restricted progenitor cell | 1.14e-23 | 66 |
myeloid cell | 2.07e-08 | 108 |
common myeloid progenitor | 2.07e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.70e-23 | 108 |
hematopoietic system | 4.72e-23 | 98 |
blood island | 4.72e-23 | 98 |
skeletal element | 2.84e-22 | 90 |
bone marrow | 9.39e-22 | 76 |
bone element | 1.03e-21 | 82 |
adult organism | 1.17e-21 | 114 |
immune system | 1.15e-20 | 93 |
skeletal system | 6.15e-19 | 100 |
embryonic structure | 2.54e-10 | 564 |
germ layer | 9.33e-10 | 560 |
germ layer / neural crest | 9.33e-10 | 560 |
embryonic tissue | 9.33e-10 | 560 |
presumptive structure | 9.33e-10 | 560 |
germ layer / neural crest derived structure | 9.33e-10 | 560 |
epiblast (generic) | 9.33e-10 | 560 |
embryo | 1.16e-09 | 592 |
developing anatomical structure | 7.50e-09 | 581 |
ectoderm-derived structure | 3.31e-07 | 171 |
ectoderm | 3.31e-07 | 171 |
presumptive ectoderm | 3.31e-07 | 171 |
neural tube | 5.47e-07 | 56 |
neural rod | 5.47e-07 | 56 |
future spinal cord | 5.47e-07 | 56 |
neural keel | 5.47e-07 | 56 |
lateral plate mesoderm | 6.52e-07 | 203 |
central nervous system | 6.60e-07 | 81 |