FFCP PHASE1:Hg19::chr10:76871395..76871398,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=142891 | |EntrezGene=142891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26320 | |HGNC=26320 | ||
|TSSclassifier=strong | |||
|UniProt=Q96LT4 | |UniProt=Q96LT4 | ||
|association_with_transcript=2bp_to_ENST00000542569,NM_001174156,NM_144660,uc001jwx.1_5end | |association_with_transcript=2bp_to_ENST00000542569,NM_001174156,NM_144660,uc001jwx.1_5end | ||
|cluster_id=chr10:76871395..76871398,+ | |||
|description=CAGE_peak_6_at_SAMD8_5end | |description=CAGE_peak_6_at_SAMD8_5end | ||
|id=chr10:76871395..76871398,+ | |id=chr10:76871395..76871398,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.20e-11!57;UBERON:0005068!1.20e-11!57;UBERON:0006241!1.20e-11!57;UBERON:0007135!1.20e-11!57;UBERON:0003080!9.40e-11!42;UBERON:0002780!3.12e-10!41;UBERON:0001890!3.12e-10!41;UBERON:0006240!3.12e-10!41;UBERON:0007023!5.68e-10!115;UBERON:0002020!1.01e-09!34;UBERON:0003528!1.01e-09!34;UBERON:0002616!1.24e-09!59;UBERON:0001893!2.68e-09!34;UBERON:0002791!9.00e-09!33;UBERON:0003075!1.03e-08!86;UBERON:0007284!1.03e-08!86;UBERON:0002346!1.07e-08!90;UBERON:0001869!1.08e-08!32;UBERON:0001017!6.72e-08!82;UBERON:0000955!7.18e-08!69;UBERON:0006238!7.18e-08!69;UBERON:0000924!1.51e-07!173;UBERON:0006601!1.51e-07!173;UBERON:0004121!1.81e-07!169;UBERON:0000073!1.90e-07!94;UBERON:0001016!1.90e-07!94;UBERON:0005743!3.00e-07!86;UBERON:0000153!3.29e-07!129;UBERON:0007811!3.29e-07!129;UBERON:0002308!6.74e-07!9;UBERON:0000125!6.74e-07!9;UBERON:0003056!7.23e-07!61;UBERON:0000033!9.66e-07!123 | |ontology_enrichment_uberon=UBERON:0001049!1.20e-11!57;UBERON:0005068!1.20e-11!57;UBERON:0006241!1.20e-11!57;UBERON:0007135!1.20e-11!57;UBERON:0003080!9.40e-11!42;UBERON:0002780!3.12e-10!41;UBERON:0001890!3.12e-10!41;UBERON:0006240!3.12e-10!41;UBERON:0007023!5.68e-10!115;UBERON:0002020!1.01e-09!34;UBERON:0003528!1.01e-09!34;UBERON:0002616!1.24e-09!59;UBERON:0001893!2.68e-09!34;UBERON:0002791!9.00e-09!33;UBERON:0003075!1.03e-08!86;UBERON:0007284!1.03e-08!86;UBERON:0002346!1.07e-08!90;UBERON:0001869!1.08e-08!32;UBERON:0001017!6.72e-08!82;UBERON:0000955!7.18e-08!69;UBERON:0006238!7.18e-08!69;UBERON:0000924!1.51e-07!173;UBERON:0006601!1.51e-07!173;UBERON:0004121!1.81e-07!169;UBERON:0000073!1.90e-07!94;UBERON:0001016!1.90e-07!94;UBERON:0005743!3.00e-07!86;UBERON:0000153!3.29e-07!129;UBERON:0007811!3.29e-07!129;UBERON:0002308!6.74e-07!9;UBERON:0000125!6.74e-07!9;UBERON:0003056!7.23e-07!61;UBERON:0000033!9.66e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.10e-09;1!UBERON:0009661;1.10e-09;1!UBERON:0002950;1.10e-09;1!UBERON:0001891;1.10e-09;1!UBERON:0002780;1.50e-09;41!UBERON:0001890;1.50e-09;41!UBERON:0003296;2.78e-09;4!UBERON:0010133;2.78e-09;4!UBERON:0002619;5.21e-09;22!UBERON:0002791;3.10e-08;32!UBERON:0000956;6.00e-08;25!UBERON:0000203;6.00e-08;25!UBERON:0002021;1.36e-07;5!UBERON:0000073;6.29e-07;53!UBERON:0002616;6.29e-07;53!UBERON:0003528;7.48e-07;34!UBERON:0002020;7.48e-07;34!UBERON:0001893;8.60e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0002038;1.10e-09;1!UBERON:0009661;1.10e-09;1!UBERON:0002950;1.10e-09;1!UBERON:0001891;1.10e-09;1!UBERON:0002780;1.50e-09;41!UBERON:0001890;1.50e-09;41!UBERON:0003296;2.78e-09;4!UBERON:0010133;2.78e-09;4!UBERON:0002619;5.21e-09;22!UBERON:0002791;3.10e-08;32!UBERON:0000956;6.00e-08;25!UBERON:0000203;6.00e-08;25!UBERON:0002021;1.36e-07;5!UBERON:0000073;6.29e-07;53!UBERON:0002616;6.29e-07;53!UBERON:0003528;7.48e-07;34!UBERON:0002020;7.48e-07;34!UBERON:0001893;8.60e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.66e-13,56;UBERON:0005068,5.66e-13,56;UBERON:0006241,5.66e-13,56;UBERON:0007135,5.66e-13,56;UBERON:0002780,1.34e-11,41;UBERON:0001890,1.34e-11,41;UBERON:0003080,1.34e-11,41;UBERON:0006240,1.34e-11,41;UBERON:0000073,4.00e-11,53;UBERON:0002616,4.00e-11,53;UBERON:0010371,2.45e-09,104;UBERON:0002038,2.67e-09,1;UBERON:0009661,2.67e-09,1;UBERON:0002950,2.67e-09,1;UBERON:0001891,2.67e-09,1;UBERON:0009616,2.67e-09,1;UBERON:0010286,2.67e-09,1;UBERON:0003296,3.44e-09,4;UBERON:0010133,3.44e-09,4;UBERON:0002619,5.36e-09,22;UBERON:0002791,1.26e-08,32;UBERON:0001017,2.01e-08,81;UBERON:0003075,2.01e-08,82;UBERON:0007284,2.01e-08,82;UBERON:0000955,2.77e-08,68;UBERON:0006238,2.77e-08,68;UBERON:0003528,4.17e-08,34;UBERON:0002020,4.17e-08,34;UBERON:0001893,4.17e-08,34;UBERON:0002346,5.76e-08,86;UBERON:0000956,6.16e-08,25;UBERON:0000203,6.16e-08,25;UBERON:0002021,1.19e-07,5;UBERON:0003056,1.60e-07,61;UBERON:0001016,1.89e-07,89 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0,0,0.305653622991805,0,0.236132343941038,0,0.383829398097213,0.464448369948228,0,0,0,0,0.142169232487422,0,0,0,0.651032612147555,0.223915474239924,0.32389366601898,0.77272670290256,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.309706370895104,0.575384784644301,0.256160706529101,0,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0.674170453335254,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0.211255286311942,0.850417199860174,0.209658645508376,0.336985893439485,0.150176892841506,0.32145117339416,1.14005097496499,0,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0,1.17903228824749,0.411202997999018,0,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0.226618685395132,0.766440987203842,0,0,0,0.651083453856419,0.950452044448374,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,1.00416183829401,0,0,0,0,0.81014194788176,0,0.22452937262617,0.337834441449967,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0.936480230490962,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0,0.0920498986422993,0.484938170456436,0,0.201504196455281,0,0.193260853163297,1.09098448236334,0.573609190778008,0.487894824518382,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,1.39310378409594,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0.301586917234893,0.462942225792648,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0.16798212819886,0,0.626909658919938,0.290633938513962,0,0,0.176096868026452,0.414656231081544,0.432359860250884,0.25248486685276,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0.112085143993527,0,1.07813787429759,0,0.508189248444927,0,0.773288812777695,0,0,0,0,1.24324654030811,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.702848489956279,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0.460385919864187,0.841980283299221,0.128139149255701,0,0.482561763430822,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0.368323955743585,0,0.182091168006717,0.524497659837696,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0.154048617114644,0.460511024178389,0.275673144969061,0,0.435050081742686,0.0852266274161009,0.0890320356467374,0.165284915360978,0.384380134730212,0.382838137483752,0.4046311234222,0.464845549297286,0.94443704049192,0,0,0,0.869932992075073,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0,0,1.56989728039846,0,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.242721043499027,0.111443384277478,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.562677665642051,0,0,0.211125408127993,0.597743964753209,0.276283915531148,0.503865495708552,0,0.123084805461069,0,0,0,0,0.493217028184668,0,0,0,0.556608588971108,0,0.260427761085233,0.174919999992391,0.724999575434793,0.227586896570999,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.221158519862449,1.18219047581419,0.658156191461918,0.10893846351899,0.278847488557207,0.307801034015188,0,0.46112780877612,0.179515288819544,0.108647371922008,0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| ||
|short_description=p6@SAMD8 | |short_description=p6@SAMD8 | ||
}} | }} |
Latest revision as of 08:57, 19 September 2015
Short description: | p6@SAMD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SAMD8_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000542569, NM_001174156, NM_144660, uc001jwx.1_5end |
EntrezGene: | SAMD8 |
HGNC: | 26320 |
UniProt: | Q96LT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.66e-13 | 56 |
neural rod | 5.66e-13 | 56 |
future spinal cord | 5.66e-13 | 56 |
neural keel | 5.66e-13 | 56 |
regional part of forebrain | 1.34e-11 | 41 |
forebrain | 1.34e-11 | 41 |
anterior neural tube | 1.34e-11 | 41 |
future forebrain | 1.34e-11 | 41 |
regional part of nervous system | 4.00e-11 | 53 |
regional part of brain | 4.00e-11 | 53 |
ecto-epithelium | 2.45e-09 | 104 |
substantia nigra | 2.67e-09 | 1 |
midbrain nucleus | 2.67e-09 | 1 |
regional part of midbrain | 2.67e-09 | 1 |
midbrain | 2.67e-09 | 1 |
presumptive midbrain | 2.67e-09 | 1 |
midbrain neural tube | 2.67e-09 | 1 |
gland of diencephalon | 3.44e-09 | 4 |
neuroendocrine gland | 3.44e-09 | 4 |
regional part of cerebral cortex | 5.36e-09 | 22 |
regional part of telencephalon | 1.26e-08 | 32 |
central nervous system | 2.01e-08 | 81 |
neural plate | 2.01e-08 | 82 |
presumptive neural plate | 2.01e-08 | 82 |
brain | 2.77e-08 | 68 |
future brain | 2.77e-08 | 68 |
brain grey matter | 4.17e-08 | 34 |
gray matter | 4.17e-08 | 34 |
telencephalon | 4.17e-08 | 34 |
neurectoderm | 5.76e-08 | 86 |
cerebral cortex | 6.16e-08 | 25 |
pallium | 6.16e-08 | 25 |
occipital lobe | 1.19e-07 | 5 |
pre-chordal neural plate | 1.60e-07 | 61 |
nervous system | 1.89e-07 | 89 |