FFCP PHASE1:Hg19::chr14:36982948..36982964,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253970 | |EntrezGene=253970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |HGNC=18387 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG42 | |UniProt=E5RG42 | ||
|association_with_transcript=15bp_to_ENST00000518446_5end | |association_with_transcript=15bp_to_ENST00000518446_5end | ||
|cluster_id=chr14:36982948..36982964,- | |||
|coexpression_cluster_id=C2293 | |coexpression_cluster_id=C2293 | ||
|description=CAGE_peak_7_at_SFTA3_5end | |description=CAGE_peak_7_at_SFTA3_5end | ||
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|ontology_enrichment_celltype=CL:0002553!8.95e-11!1;CL:0000082!4.37e-08!19 | |ontology_enrichment_celltype=CL:0002553!8.95e-11!1;CL:0000082!4.37e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.78e-29;1!CL:0000082;3.87e-14;19!CL:0000322;1.09e-10;3 | |ontology_enrichment_celltype_v019=CL:0002553;1.78e-29;1!CL:0000082;3.87e-14;19!CL:0000322;1.09e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.78e-29,1;CL:0000082,3.96e-14,19;CL:0000322,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.16e-35;29!UBERON:0001041;4.55e-34;30!UBERON:0007123;6.39e-07;5 | |ontology_enrichment_development_v019=UBERON:0008947;3.16e-35;29!UBERON:0001041;4.55e-34;30!UBERON:0007123;6.39e-07;5 | ||
|ontology_enrichment_disease=DOID:3112!3.01e-10!1;DOID:1324!3.31e-10!15;DOID:3905!6.29e-10!9;DOID:0050615!1.41e-09!16;DOID:3908!1.83e-08!5 | |ontology_enrichment_disease=DOID:3112!3.01e-10!1;DOID:1324!3.31e-10!15;DOID:3905!6.29e-10!9;DOID:0050615!1.41e-09!16;DOID:3908!1.83e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:3908;1.36e-23;5!DOID:1324;1.07e-17;15!DOID:0050615;1.22e-16;16!DOID:3910;2.37e-15;2!DOID:3905;1.35e-13;9!DOID:4556;7.07e-11;3 | |ontology_enrichment_disease_v019=DOID:3908;1.36e-23;5!DOID:1324;1.07e-17;15!DOID:0050615;1.22e-16;16!DOID:3910;2.37e-15;2!DOID:3905;1.35e-13;9!DOID:4556;7.07e-11;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3908,1.44e-23,5;DOID:1324,1.10e-17,15;DOID:0050615,1.25e-16,16;DOID:3910,2.74e-15,2;DOID:3905,1.40e-13,9;DOID:4556,6.73e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.92e-29!5;UBERON:0004117!1.92e-29!5;UBERON:0007689!1.92e-29!5;UBERON:0007123!1.92e-29!5;UBERON:0003091!1.92e-29!5;UBERON:0002048!3.71e-20!22;UBERON:0000117!3.71e-20!22;UBERON:0000171!3.71e-20!22;UBERON:0000170!3.71e-20!22;UBERON:0005597!3.71e-20!22;UBERON:0000118!3.71e-20!22;UBERON:0000341!4.13e-19!2;UBERON:0005178!1.74e-16!34;UBERON:0002224!1.74e-16!34;UBERON:0005181!5.50e-16!35;UBERON:0005153!4.46e-15!37;UBERON:0008947!1.20e-14!38;UBERON:0003258!1.20e-14!38;UBERON:0005911!2.95e-14!82;UBERON:0009722!1.54e-13!11;UBERON:0007690!1.54e-13!11;UBERON:0002171!8.14e-11!1;UBERON:0006518!8.14e-11!1;UBERON:0008949!8.14e-11!1;UBERON:0000101!8.14e-11!1;UBERON:0002167!8.14e-11!1;UBERON:0005157!1.17e-10!51;UBERON:0000915!1.98e-10!52;UBERON:0000065!3.26e-10!53;UBERON:0001874!3.29e-10!1;UBERON:0001882!4.75e-10!1;UBERON:0005403!4.75e-10!1;UBERON:0008814!5.58e-10!15;UBERON:0000369!9.79e-10!4;UBERON:0002435!9.79e-10!4;UBERON:0000204!9.79e-10!4;UBERON:0010082!9.79e-10!4;UBERON:0004802!4.37e-08!19;UBERON:0000115!4.37e-08!19;UBERON:0001007!8.49e-08!155;UBERON:0001555!8.49e-08!155;UBERON:0007026!8.49e-08!155;UBERON:0001004!3.03e-07!72;UBERON:0004119!5.63e-07!169;UBERON:0000925!5.63e-07!169;UBERON:0006595!5.63e-07!169 | |ontology_enrichment_uberon=UBERON:0002046!1.92e-29!5;UBERON:0004117!1.92e-29!5;UBERON:0007689!1.92e-29!5;UBERON:0007123!1.92e-29!5;UBERON:0003091!1.92e-29!5;UBERON:0002048!3.71e-20!22;UBERON:0000117!3.71e-20!22;UBERON:0000171!3.71e-20!22;UBERON:0000170!3.71e-20!22;UBERON:0005597!3.71e-20!22;UBERON:0000118!3.71e-20!22;UBERON:0000341!4.13e-19!2;UBERON:0005178!1.74e-16!34;UBERON:0002224!1.74e-16!34;UBERON:0005181!5.50e-16!35;UBERON:0005153!4.46e-15!37;UBERON:0008947!1.20e-14!38;UBERON:0003258!1.20e-14!38;UBERON:0005911!2.95e-14!82;UBERON:0009722!1.54e-13!11;UBERON:0007690!1.54e-13!11;UBERON:0002171!8.14e-11!1;UBERON:0006518!8.14e-11!1;UBERON:0008949!8.14e-11!1;UBERON:0000101!8.14e-11!1;UBERON:0002167!8.14e-11!1;UBERON:0005157!1.17e-10!51;UBERON:0000915!1.98e-10!52;UBERON:0000065!3.26e-10!53;UBERON:0001874!3.29e-10!1;UBERON:0001882!4.75e-10!1;UBERON:0005403!4.75e-10!1;UBERON:0008814!5.58e-10!15;UBERON:0000369!9.79e-10!4;UBERON:0002435!9.79e-10!4;UBERON:0000204!9.79e-10!4;UBERON:0010082!9.79e-10!4;UBERON:0004802!4.37e-08!19;UBERON:0000115!4.37e-08!19;UBERON:0001007!8.49e-08!155;UBERON:0001555!8.49e-08!155;UBERON:0007026!8.49e-08!155;UBERON:0001004!3.03e-07!72;UBERON:0004119!5.63e-07!169;UBERON:0000925!5.63e-07!169;UBERON:0006595!5.63e-07!169 | ||
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|short_description=p7@SFTA3 | |short_description=p7@SFTA3 | ||
}} | }} |
Latest revision as of 22:21, 19 September 2015
Short description: | p7@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SFTA3_5end |
Coexpression cluster: | C2293_large_lung_nonsmall_throat_trachea_bronchioalveolar_thyroid |
Association with transcript: | 15bp_to_ENST00000518446_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | E5RG42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.78e-29 | 1 |
epithelial cell of lung | 3.96e-14 | 19 |
pneumocyte | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 1.44e-23 | 5 |
lung cancer | 1.10e-17 | 15 |
respiratory system cancer | 1.25e-16 | 16 |
lung adenocarcinoma | 2.74e-15 | 2 |
lung carcinoma | 1.40e-13 | 9 |
lung large cell carcinoma | 6.73e-11 | 3 |