FFCP PHASE1:Hg19::chr13:76335096..76335107,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLH4,Q8WWI1 | |UniProt=E9PLH4,Q8WWI1 | ||
|association_with_transcript=299bp_to_ENST00000465261,NM_015842,uc001vjv.2_5end | |association_with_transcript=299bp_to_ENST00000465261,NM_015842,uc001vjv.2_5end | ||
|cluster_id=chr13:76335096..76335107,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_27_at_LMO7_5end | |description=CAGE_peak_27_at_LMO7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002563;3.85e-14;4!CL:0002253;7.52e-08;2!CL:0002535;7.52e-08;2 | |ontology_enrichment_celltype_v019=CL:0002563;3.85e-14;4!CL:0002253;7.52e-08;2!CL:0002535;7.52e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.85e-14,4;CL:0002253,7.52e-08,2;CL:0002535,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.11e-14;1 | |ontology_enrichment_development_v019=UBERON:0005425;2.11e-14;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;4.55e-09;14 | |ontology_enrichment_disease_v019=DOID:3119;4.55e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,4.68e-09,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;9.45e-47;17!UBERON:0005409;5.90e-46;22!UBERON:0004921;2.90e-26;33!UBERON:0002108;6.03e-25;4!UBERON:0000059;9.21e-20;11!UBERON:0000941;2.11e-14;1!UBERON:0001785;2.11e-14;1!UBERON:0002464;2.11e-14;1!UBERON:0004904;2.11e-14;1!UBERON:0001021;2.11e-14;1!UBERON:0001052;3.37e-14;4!UBERON:0001242;3.85e-14;4!UBERON:0001262;3.85e-14;4!UBERON:0004786;3.85e-14;4!UBERON:0004808;3.85e-14;4!UBERON:0001277;3.85e-14;4!UBERON:0001155;5.06e-14;9!UBERON:0004907;1.50e-11;5!UBERON:0001555;2.31e-10;54!UBERON:0000485;1.78e-08;7!UBERON:0003929;1.78e-08;7!UBERON:0003714;7.52e-08;2!UBERON:0005162;7.52e-08;2!UBERON:0000122;7.52e-08;2!UBERON:0006955;7.52e-08;2!UBERON:0004801;7.52e-08;2!UBERON:0003350;1.60e-07;8!UBERON:0001007;5.65e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0000160;9.45e-47;17!UBERON:0005409;5.90e-46;22!UBERON:0004921;2.90e-26;33!UBERON:0002108;6.03e-25;4!UBERON:0000059;9.21e-20;11!UBERON:0000941;2.11e-14;1!UBERON:0001785;2.11e-14;1!UBERON:0002464;2.11e-14;1!UBERON:0004904;2.11e-14;1!UBERON:0001021;2.11e-14;1!UBERON:0001052;3.37e-14;4!UBERON:0001242;3.85e-14;4!UBERON:0001262;3.85e-14;4!UBERON:0004786;3.85e-14;4!UBERON:0004808;3.85e-14;4!UBERON:0001277;3.85e-14;4!UBERON:0001155;5.06e-14;9!UBERON:0004907;1.50e-11;5!UBERON:0001555;2.31e-10;54!UBERON:0000485;1.78e-08;7!UBERON:0003929;1.78e-08;7!UBERON:0003714;7.52e-08;2!UBERON:0005162;7.52e-08;2!UBERON:0000122;7.52e-08;2!UBERON:0006955;7.52e-08;2!UBERON:0004801;7.52e-08;2!UBERON:0003350;1.60e-07;8!UBERON:0001007;5.65e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.00e-46,17;UBERON:0005409,1.57e-40,25;UBERON:0002108,6.28e-25,4;UBERON:0000059,9.44e-20,11;UBERON:0000941,1.84e-14,1;UBERON:0001785,1.84e-14,1;UBERON:0002464,1.84e-14,1;UBERON:0004904,1.84e-14,1;UBERON:0001021,1.84e-14,1;UBERON:0003902,1.84e-14,1;UBERON:0005425,1.84e-14,1;UBERON:0001052,3.37e-14,4;UBERON:0001242,3.85e-14,4;UBERON:0001262,3.85e-14,4;UBERON:0004786,3.85e-14,4;UBERON:0004808,3.85e-14,4;UBERON:0001277,3.85e-14,4;UBERON:0001155,5.17e-14,9;UBERON:0004907,1.50e-11,5;UBERON:0004921,4.30e-10,118;UBERON:0011216,2.08e-08,223;UBERON:0001007,5.28e-08,145;UBERON:0001555,5.28e-08,145;UBERON:0007026,5.28e-08,145;UBERON:0003714,7.03e-08,2;UBERON:0005162,7.03e-08,2;UBERON:0000122,7.03e-08,2;UBERON:0006955,9.19e-08,2;UBERON:0004801,9.19e-08,2;UBERON:0003350,1.60e-07,8;UBERON:0004119,3.83e-07,160;UBERON:0000925,3.83e-07,160;UBERON:0006595,3.83e-07,160;UBERON:0001046,7.64e-07,19;UBERON:0000485,8.84e-07,9 | |||
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|short_description=p27@LMO7 | |short_description=p27@LMO7 | ||
}} | }} |
Latest revision as of 00:15, 18 September 2015
Short description: | p27@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_LMO7_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 299bp_to_ENST00000465261, NM_015842, uc001vjv.2_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLH4Q8WWI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.85e-14 | 4 |
epithelial cell of large intestine | 7.52e-08 | 2 |
epithelial cell of cervix | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.68e-09 | 14 |