FFCP PHASE1:Hg19::chr2:139537925..139537946,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:139537925..139537946,-
|short_description=p2@NXPH2
|description=CAGE_peak_2_at_NXPH2_5end
|association_with_transcript=-7bp_to_ENST00000272641_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11249 | |EntrezGene=11249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8076 | |HGNC=8076 | ||
|TSSclassifier=strong | |||
|UniProt=O95156 | |UniProt=O95156 | ||
|association_with_transcript=-7bp_to_ENST00000272641_5end | |||
|cluster_id=chr2:139537925..139537946,- | |||
|coexpression_cluster_id=C1263 | |||
|description=CAGE_peak_2_at_NXPH2_5end | |||
|id=chr2:139537925..139537946,- | |||
|ontology_enrichment_celltype=CL:0002319!4.51e-11!25;CL:0000128!1.16e-07!7;CL:0000126!1.16e-07!7;CL:0000127!1.16e-07!7;CL:0002453!1.16e-07!7;CL:0000095!4.46e-07!17;CL:0000123!4.46e-07!17;CL:0000133!9.85e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000174;4.42e-14;3!CL:0002174;3.45e-11;1!CL:0000501;3.45e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000174,3.62e-14,3;CL:0002174,4.01e-11,1;CL:0000501,4.01e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.71e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.57e-39!86;UBERON:0001017!3.43e-38!82;UBERON:0000073!2.99e-37!94;UBERON:0001016!2.99e-37!94;UBERON:0002346!1.35e-31!90;UBERON:0000955!3.90e-31!69;UBERON:0006238!3.90e-31!69;UBERON:0001049!5.92e-30!57;UBERON:0005068!5.92e-30!57;UBERON:0006241!5.92e-30!57;UBERON:0007135!5.92e-30!57;UBERON:0003075!2.36e-28!86;UBERON:0007284!2.36e-28!86;UBERON:0002616!1.03e-26!59;UBERON:0002780!2.08e-26!41;UBERON:0001890!2.08e-26!41;UBERON:0006240!2.08e-26!41;UBERON:0003080!1.39e-25!42;UBERON:0000924!4.87e-25!173;UBERON:0006601!4.87e-25!173;UBERON:0001893!1.85e-23!34;UBERON:0001869!2.22e-23!32;UBERON:0000956!2.68e-23!25;UBERON:0000203!2.68e-23!25;UBERON:0004121!1.68e-22!169;UBERON:0002791!4.83e-22!33;UBERON:0003056!8.52e-22!61;UBERON:0002020!2.07e-21!34;UBERON:0003528!2.07e-21!34;UBERON:0000033!8.31e-20!123;UBERON:0002619!1.23e-19!22;UBERON:0000153!2.10e-19!129;UBERON:0007811!2.10e-19!129;UBERON:0001950!3.87e-19!20;UBERON:0007023!1.93e-11!115;UBERON:0000200!3.08e-10!6;UBERON:0002021!6.67e-10!5;UBERON:0000119!8.77e-08!312;UBERON:0000483!1.36e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.76e-18;5!UBERON:0002346;2.89e-11;4!UBERON:0000923;2.89e-11;4!UBERON:0010316;2.89e-11;4!UBERON:0005291;2.89e-11;4!UBERON:0002619;1.13e-10;22!UBERON:0000956;1.99e-09;25!UBERON:0000203;1.99e-09;25!UBERON:0002050;3.45e-09;5!UBERON:0005423;3.45e-09;5!UBERON:0001950;8.87e-08;20!UBERON:0002780;3.63e-07;41!UBERON:0001890;3.63e-07;41!UBERON:0002791;3.85e-07;32!UBERON:0001869;4.47e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.83e-18,5;UBERON:0001017,1.81e-15,81;UBERON:0001016,8.90e-14,89;UBERON:0000955,7.17e-13,68;UBERON:0006238,7.17e-13,68;UBERON:0002619,1.17e-10,22;UBERON:0000956,2.05e-09,25;UBERON:0000203,2.05e-09,25;UBERON:0004121,4.24e-09,171;UBERON:0000924,4.24e-09,171;UBERON:0006601,4.24e-09,171;UBERON:0000073,2.54e-08,53;UBERON:0002616,2.54e-08,53;UBERON:0002346,4.19e-08,86;UBERON:0002780,4.21e-08,41;UBERON:0001890,4.21e-08,41;UBERON:0003080,4.21e-08,41;UBERON:0006240,4.21e-08,41;UBERON:0001049,7.58e-08,56;UBERON:0005068,7.58e-08,56;UBERON:0006241,7.58e-08,56;UBERON:0007135,7.58e-08,56;UBERON:0001950,9.54e-08,20;UBERON:0002791,2.18e-07,32;UBERON:0001869,2.18e-07,32;UBERON:0003528,5.89e-07,34;UBERON:0002020,5.89e-07,34;UBERON:0001893,5.89e-07,34 | |||
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| ||
|short_description=p2@NXPH2 | |||
}} | }} |
Latest revision as of 04:18, 17 September 2015
Short description: | p2@NXPH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NXPH2_5end |
Coexpression cluster: | C1263_neuroectodermal_glioblastoma_pons_pineal_parietal_rhabdomyosarcoma_occipital |
Association with transcript: | -7bp_to_ENST00000272641_5end |
EntrezGene: | NXPH2 |
HGNC: | 8076 |
UniProt: | O95156 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
steroid hormone secreting cell | 3.62e-14 | 3 |
follicular cell of ovary | 4.01e-11 | 1 |
granulosa cell | 4.01e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.83e-18 | 5 |
central nervous system | 1.81e-15 | 81 |
nervous system | 8.90e-14 | 89 |
brain | 7.17e-13 | 68 |
future brain | 7.17e-13 | 68 |
regional part of cerebral cortex | 1.17e-10 | 22 |
cerebral cortex | 2.05e-09 | 25 |
pallium | 2.05e-09 | 25 |
ectoderm-derived structure | 4.24e-09 | 171 |
ectoderm | 4.24e-09 | 171 |
presumptive ectoderm | 4.24e-09 | 171 |
regional part of nervous system | 2.54e-08 | 53 |
regional part of brain | 2.54e-08 | 53 |
neurectoderm | 4.19e-08 | 86 |
regional part of forebrain | 4.21e-08 | 41 |
forebrain | 4.21e-08 | 41 |
anterior neural tube | 4.21e-08 | 41 |
future forebrain | 4.21e-08 | 41 |
neural tube | 7.58e-08 | 56 |
neural rod | 7.58e-08 | 56 |
future spinal cord | 7.58e-08 | 56 |
neural keel | 7.58e-08 | 56 |
neocortex | 9.54e-08 | 20 |
regional part of telencephalon | 2.18e-07 | 32 |
cerebral hemisphere | 2.18e-07 | 32 |
brain grey matter | 5.89e-07 | 34 |
gray matter | 5.89e-07 | 34 |
telencephalon | 5.89e-07 | 34 |