FFCP PHASE1:Hg19::chr2:152590949..152590960,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:152590949..152590960,-
|short_description=p2@NEB
|description=CAGE_peak_2_at_NEB_5end
|association_with_transcript=-3bp_to_ENST00000172853_5end
|EntrezGen...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4703 | |EntrezGene=4703 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7720 | |HGNC=7720 | ||
|TSSclassifier=strong | |||
|UniProt=P20929 | |UniProt=P20929 | ||
|association_with_transcript=-3bp_to_ENST00000172853_5end | |||
|cluster_id=chr2:152590949..152590960,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_2_at_NEB_5end | |||
|id=chr2:152590949..152590960,- | |||
|ontology_enrichment_celltype=CL:0000188!1.68e-11!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.78e-09;1!UBERON:0009143;1.65e-08;1!UBERON:0006298;1.65e-08;1!UBERON:0008801;3.40e-08;1!UBERON:0005425;3.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-16!115;UBERON:0003135!7.05e-14!11;UBERON:0001630!1.06e-10!2;UBERON:0005090!1.06e-10!2;UBERON:0000341!1.93e-10!2;UBERON:0003127!3.35e-10!2;UBERON:0001829!5.03e-10!2;UBERON:0003101!8.12e-09!22;UBERON:0000079!8.12e-09!22;UBERON:0000473!9.99e-09!8;UBERON:0001042!2.16e-07!10;UBERON:0009145!2.16e-07!10;UBERON:0001723!2.36e-07!3;UBERON:0001033!2.36e-07!3;UBERON:0010056!2.36e-07!3;UBERON:0008814!2.50e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;3.83e-16;2!UBERON:0001630;3.83e-16;2!UBERON:0000341;9.67e-16;2!UBERON:0003127;2.68e-15;2!UBERON:0001829;5.32e-15;2!UBERON:0001134;2.08e-11;16!UBERON:0002036;2.08e-11;16!UBERON:0001723;5.32e-11;3!UBERON:0001033;5.32e-11;3!UBERON:0001389;5.59e-09;1!UBERON:0000026;5.59e-09;1!UBERON:0008784;5.59e-09;1!UBERON:0006058;5.59e-09;1!UBERON:0003663;5.59e-09;1!UBERON:0004256;5.59e-09;1!UBERON:0004708;5.59e-09;1!UBERON:0002101;5.59e-09;1!UBERON:0004709;5.59e-09;1!UBERON:0002529;5.59e-09;1!UBERON:0010538;5.59e-09;1!UBERON:0003661;5.59e-09;1!UBERON:0010890;5.59e-09;1!UBERON:0002471;5.59e-09;1!UBERON:0001383;5.59e-09;1!UBERON:0010758;5.59e-09;1!UBERON:0010707;5.59e-09;1!UBERON:0000978;5.59e-09;1!UBERON:0002103;5.59e-09;1!UBERON:0001665;5.59e-09;1!UBERON:0003823;5.59e-09;1!UBERON:0000154;5.59e-09;1!UBERON:0010709;5.59e-09;1!UBERON:0002426;7.01e-09;1!UBERON:0003831;7.01e-09;1!UBERON:0003898;7.01e-09;1!UBERON:0004830;7.01e-09;1!UBERON:0003830;7.01e-09;1!UBERON:0005175;7.01e-09;1!UBERON:0001774;7.01e-09;1!UBERON:0001103;7.01e-09;1!UBERON:0000989;8.78e-09;1!UBERON:0008811;8.78e-09;1!UBERON:0007029;1.06e-08;1!UBERON:0001736;1.65e-08;1!UBERON:0001301;1.65e-08;1!UBERON:0002372;2.29e-08;1!UBERON:0001961;2.29e-08;1!UBERON:0001744;2.29e-08;1!UBERON:0001042;2.29e-08;1!UBERON:0001735;2.29e-08;1!UBERON:0001831;3.40e-08;1!UBERON:0000941;3.40e-08;1!UBERON:0001785;3.40e-08;1!UBERON:0002464;3.40e-08;1!UBERON:0004904;3.40e-08;1!UBERON:0001021;3.40e-08;1!UBERON:0001567;3.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,3.83e-16,2;UBERON:0001630,3.83e-16,2;UBERON:0000341,1.00e-15,2;UBERON:0003127,2.41e-15,2;UBERON:0001829,4.61e-15,2;UBERON:0007023,2.60e-11,114;UBERON:0001723,5.32e-11,3;UBERON:0001033,5.32e-11,3;UBERON:0010056,5.32e-11,3;UBERON:0005418,5.59e-09,1;UBERON:0001389,5.59e-09,1;UBERON:0000026,5.59e-09,1;UBERON:0008784,5.59e-09,1;UBERON:0006058,5.59e-09,1;UBERON:0003663,5.59e-09,1;UBERON:0004256,5.59e-09,1;UBERON:0004708,5.59e-09,1;UBERON:0002101,5.59e-09,1;UBERON:0004709,5.59e-09,1;UBERON:0002529,5.59e-09,1;UBERON:0010538,5.59e-09,1;UBERON:0003661,5.59e-09,1;UBERON:0010890,5.59e-09,1;UBERON:0002471,5.59e-09,1;UBERON:0001383,5.59e-09,1;UBERON:0004357,5.59e-09,1;UBERON:0004347,5.59e-09,1;UBERON:0005420,5.59e-09,1;UBERON:0005732,5.59e-09,1;UBERON:0010758,5.59e-09,1;UBERON:0010707,5.59e-09,1;UBERON:0000978,5.59e-09,1;UBERON:0002103,5.59e-09,1;UBERON:0001665,5.59e-09,1;UBERON:0003823,5.59e-09,1;UBERON:0000154,5.59e-09,1;UBERON:0010709,5.59e-09,1;UBERON:0005733,5.59e-09,1;UBERON:0005730,5.59e-09,1;UBERON:0002426,7.01e-09,1;UBERON:0003831,7.01e-09,1;UBERON:0003898,7.01e-09,1;UBERON:0004830,7.01e-09,1;UBERON:0003830,7.01e-09,1;UBERON:0005175,7.01e-09,1;UBERON:0001774,7.01e-09,1;UBERON:0001103,7.01e-09,1;UBERON:0010084,7.01e-09,1;UBERON:0000989,8.78e-09,1;UBERON:0008811,8.78e-09,1;UBERON:0006258,8.78e-09,1;UBERON:0005876,8.78e-09,1;UBERON:0004874,8.78e-09,1;UBERON:0007029,1.02e-08,1;UBERON:0001301,1.59e-08,1;UBERON:0001736,1.71e-08,1;UBERON:0006298,1.71e-08,1;UBERON:0002372,2.46e-08,1;UBERON:0001961,2.46e-08,1;UBERON:0001744,2.46e-08,1;UBERON:0001735,2.46e-08,1;UBERON:0001831,2.84e-08,1;UBERON:0001567,2.84e-08,1;UBERON:0008801,2.84e-08,1;UBERON:0000941,3.06e-08,1;UBERON:0001785,3.06e-08,1;UBERON:0002464,3.06e-08,1;UBERON:0004904,3.06e-08,1;UBERON:0001021,3.06e-08,1;UBERON:0003902,3.06e-08,1;UBERON:0005425,3.06e-08,1;UBERON:0000166,4.88e-08,22;UBERON:0001042,3.85e-07,10;UBERON:0009145,3.85e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0.460511024178389,0,0,0.145016693914229,0.170453254832202,2.67096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8876685714664,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.0474541406837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63961339319714,0,0,0,0,6.69224213770094,0,6.32746074185491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,38.704471914365,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0,0,0,10.0837797935496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,951.720390666205,765.351225113322,17.397216470073,17.485595750129,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,6.42220996766357,0,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0,0.827054095813604,0,0.833565680400634,0.267964130156178,0,0,63.1172586426903,13.0935437305057,0,0.0620747142958579,0,4.07341812980255,5.65928129083014,81.8614972092575,73.2379264322501,4.04112318087525,4.66194335052396,13.6390746183865,0,0,0,0,0,0,0,0,1.40891655513718,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0.460511024178389,0,0,0.145016693914229,0.170453254832202,2.67096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8876685714664,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.0474541406837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63961339319714,0,0,0,0,6.69224213770094,0,6.32746074185491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,38.704471914365,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0,0,0,10.0837797935496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,951.720390666205,765.351225113322,17.397216470073,17.485595750129,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,6.42220996766357,0,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0,0.827054095813604,0,0.833565680400634,0.267964130156178,0,0,63.1172586426903,13.0935437305057,0,0.0620747142958579,0,4.07341812980255,5.65928129083014,81.8614972092575,73.2379264322501,4.04112318087525,4.66194335052396,13.6390746183865,0,0,0,0,0,0,0,0,1.40891655513718,0 | ||
|short_description=p2@NEB | |||
}} | }} |
Latest revision as of 13:51, 17 September 2015
Short description: | p2@NEB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEB_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -3bp_to_ENST00000172853_5end |
EntrezGene: | NEB |
HGNC: | 7720 |
UniProt: | P20929 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data