FFCP PHASE1:Mm9::chr14:122874356..122874371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22772 | |EntrezGene=22772 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |MCL_coexpression_id=30 | ||
|TSSclassifier=NA | |||
|UniProt=D3YXF6 | |UniProt=D3YXF6 | ||
|association_with_transcript=-232bp_to_ENSMUST00000110682_5end | |association_with_transcript=-232bp_to_ENSMUST00000110682_5end | ||
|cluster_id=chr14:122874356..122874371,+ | |||
|description=CAGE_peak_4_at_Zic2_5end | |description=CAGE_peak_4_at_Zic2_5end | ||
|id=chr14:122874356..122874371,+ | |id=chr14:122874356..122874371,+ | ||
|ontology_enrichment_celltype=CL:0002319!7.49e-10!43;CL:0000221!1.75e-09!44;CL:0000133!1.75e-09!44;CL:0002453!1.53e-08!8;CL:0000333!5.44e-08!10;CL:0000095!5.44e-08!10;CL:0000243!5.44e-08!10;CL:0000123!5.44e-08!10;CL:0000125!5.44e-08!10;CL:0000030!5.44e-08!10;CL:0000339!5.44e-08!10;CL:0000055!1.31e-07!50;CL:0000117!5.23e-07!23;CL:0000337!5.23e-07!23 | |ontology_enrichment_celltype=CL:0002319!7.49e-10!43;CL:0000221!1.75e-09!44;CL:0000133!1.75e-09!44;CL:0002453!1.53e-08!8;CL:0000333!5.44e-08!10;CL:0000095!5.44e-08!10;CL:0000243!5.44e-08!10;CL:0000123!5.44e-08!10;CL:0000125!5.44e-08!10;CL:0000030!5.44e-08!10;CL:0000339!5.44e-08!10;CL:0000055!1.31e-07!50;CL:0000117!5.23e-07!23;CL:0000337!5.23e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,9.61e-16,2;CL:0002604,9.61e-16,2;CL:0002453,3.32e-15,8;CL:0000333,3.15e-12,10;CL:0000095,3.15e-12,10;CL:0000243,3.15e-12,10;CL:0000123,3.15e-12,10;CL:0000125,3.15e-12,10;CL:0000030,3.15e-12,10;CL:0000339,3.15e-12,10;CL:0000128,8.78e-12,6;CL:0000126,8.78e-12,6;CL:0000127,8.78e-12,6;CL:0002613,2.21e-10,3;CL:0002374,1.05e-08,1;CL:0000202,1.05e-08,1;CL:0000199,1.05e-08,1;CL:0000855,1.05e-08,1;CL:0000589,1.05e-08,1;CL:0002319,6.33e-08,43;CL:0000221,9.84e-08,44;CL:0000133,9.84e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.78e-27!63;UBERON:0000073!4.70e-22!75;UBERON:0001016!4.70e-22!75;UBERON:0001017!6.95e-22!73;UBERON:0005743!6.95e-22!73;UBERON:0000955!7.37e-22!50;UBERON:0006238!7.37e-22!50;UBERON:0002616!5.64e-21!49;UBERON:0004121!2.60e-20!102;UBERON:0000924!2.60e-20!102;UBERON:0006601!2.60e-20!102;UBERON:0002346!1.26e-19!71;UBERON:0003075!1.26e-19!71;UBERON:0007284!1.26e-19!71;UBERON:0001049!2.92e-19!52;UBERON:0005068!2.92e-19!52;UBERON:0006241!2.92e-19!52;UBERON:0007135!2.92e-19!52;UBERON:0003056!5.98e-19!49;UBERON:0000153!9.41e-17!94;UBERON:0007811!2.44e-16!86;UBERON:0002780!2.70e-14!39;UBERON:0001890!2.70e-14!39;UBERON:0006240!2.70e-14!39;UBERON:0003080!9.39e-14!40;UBERON:0002020!1.82e-09!34;UBERON:0002791!2.60e-09!29;UBERON:0003528!2.60e-09!29;UBERON:0001893!2.60e-09!29;UBERON:0004733!1.38e-08!6;UBERON:0004732!1.38e-08!6;UBERON:0002028!1.38e-08!6;UBERON:0007277!1.38e-08!6;UBERON:0002420!3.10e-08!8;UBERON:0007245!3.10e-08!8;UBERON:0010009!3.10e-08!8;UBERON:0010011!3.10e-08!8;UBERON:0000454!3.10e-08!8;UBERON:0000369!3.48e-07!5;UBERON:0002435!3.48e-07!5;UBERON:0000204!3.48e-07!5;UBERON:0010082!3.48e-07!5 | |ontology_enrichment_uberon=UBERON:0000033!6.78e-27!63;UBERON:0000073!4.70e-22!75;UBERON:0001016!4.70e-22!75;UBERON:0001017!6.95e-22!73;UBERON:0005743!6.95e-22!73;UBERON:0000955!7.37e-22!50;UBERON:0006238!7.37e-22!50;UBERON:0002616!5.64e-21!49;UBERON:0004121!2.60e-20!102;UBERON:0000924!2.60e-20!102;UBERON:0006601!2.60e-20!102;UBERON:0002346!1.26e-19!71;UBERON:0003075!1.26e-19!71;UBERON:0007284!1.26e-19!71;UBERON:0001049!2.92e-19!52;UBERON:0005068!2.92e-19!52;UBERON:0006241!2.92e-19!52;UBERON:0007135!2.92e-19!52;UBERON:0003056!5.98e-19!49;UBERON:0000153!9.41e-17!94;UBERON:0007811!2.44e-16!86;UBERON:0002780!2.70e-14!39;UBERON:0001890!2.70e-14!39;UBERON:0006240!2.70e-14!39;UBERON:0003080!9.39e-14!40;UBERON:0002020!1.82e-09!34;UBERON:0002791!2.60e-09!29;UBERON:0003528!2.60e-09!29;UBERON:0001893!2.60e-09!29;UBERON:0004733!1.38e-08!6;UBERON:0004732!1.38e-08!6;UBERON:0002028!1.38e-08!6;UBERON:0007277!1.38e-08!6;UBERON:0002420!3.10e-08!8;UBERON:0007245!3.10e-08!8;UBERON:0010009!3.10e-08!8;UBERON:0010011!3.10e-08!8;UBERON:0000454!3.10e-08!8;UBERON:0000369!3.48e-07!5;UBERON:0002435!3.48e-07!5;UBERON:0000204!3.48e-07!5;UBERON:0010082!3.48e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.42e-18,4;UBERON:0002680,7.42e-18,4;UBERON:0001895,7.42e-18,4;UBERON:0010092,7.42e-18,4;UBERON:0006215,7.42e-18,4;UBERON:0004733,4.10e-12,6;UBERON:0004732,4.10e-12,6;UBERON:0002028,4.10e-12,6;UBERON:0007277,4.10e-12,6;UBERON:0001954,4.65e-10,7;UBERON:0003022,4.65e-10,7;UBERON:0002421,4.65e-10,7;UBERON:0000349,4.65e-10,7;UBERON:0002600,4.65e-10,7;UBERON:0002616,1.09e-09,46;UBERON:0000955,1.81e-09,47;UBERON:0006238,1.81e-09,47;UBERON:0001017,2.74e-09,73;UBERON:0010371,2.87e-09,73;UBERON:0001016,5.14e-09,75;UBERON:0002346,1.34e-08,64;UBERON:0003075,1.34e-08,64;UBERON:0007284,1.34e-08,64;UBERON:0001049,1.71e-08,52;UBERON:0005068,1.71e-08,52;UBERON:0006241,1.71e-08,52;UBERON:0007135,1.71e-08,52;UBERON:0004121,1.72e-08,95;UBERON:0000924,1.72e-08,95;UBERON:0006601,1.72e-08,95;UBERON:0000073,3.74e-08,54;UBERON:0010314,3.76e-07,92 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0.218025156380447,1.09843091367236,2.52758868796568,0.55994568650145,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,1.92109152660777,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0.923204014111357,1.09785172322892,1.04182674111352,0.837548997004143,0,0.916789486660861,0,0.427115042397309,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4679166625312,12.1479089951804,0,0,0,0,0,0.915001205637253,0.125654352112864,0.173824320192276,0.511430914660661,0.41557608911912,0.486723789203273,0,0,0,0.210441855886474,0,0.459804208866946,1.26043490863744,0.452114453507145,0.612328492361951,0.384341160854549,0.281105173679186,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.986852422704233,0.503653849092235,0,0,0,0,0,0,0,0,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0.218025156380447,1.09843091367236,2.52758868796568,0.55994568650145,0,0,0,0,0,0,0,0.809265843438391,0,0.633831403506179,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,1.92109152660777,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0.923204014111357,1.09785172322892,1.04182674111352,0.837548997004143,0,0.916789486660861,0,0.427115042397309,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4679166625312,12.1479089951804,0,0,0,0,0,0.915001205637253,0.125654352112864,0.173824320192276,0.511430914660661,0.41557608911912,0.486723789203273,0,0,0,0.210441855886474,0,0.459804208866946,1.26043490863744,0.452114453507145,0.612328492361951,0.384341160854549,0.281105173679186,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.986852422704233,0.503653849092235,0,0,0,0,0,0,0,0,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p4@Zic2 | |short_description=p4@Zic2 | ||
}} | }} |
Latest revision as of 17:15, 25 September 2015
Short description: | p4@Zic2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Zic2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -232bp_to_ENSMUST00000110682_5end |
EntrezGene: | Zic2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 9.61e-16 | 2 |
astrocyte of the hippocampus | 9.61e-16 | 2 |
oligodendrocyte precursor cell | 3.32e-15 | 8 |
migratory neural crest cell | 3.15e-12 | 10 |
neuron associated cell | 3.15e-12 | 10 |
glial cell (sensu Vertebrata) | 3.15e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 3.15e-12 | 10 |
glial cell | 3.15e-12 | 10 |
glioblast | 3.15e-12 | 10 |
glioblast (sensu Vertebrata) | 3.15e-12 | 10 |
oligodendrocyte | 8.78e-12 | 6 |
macroglial cell | 8.78e-12 | 6 |
astrocyte | 8.78e-12 | 6 |
striatum neuron | 2.21e-10 | 3 |
ear hair cell | 1.05e-08 | 1 |
auditory hair cell | 1.05e-08 | 1 |
mechanoreceptor cell | 1.05e-08 | 1 |
sensory hair cell | 1.05e-08 | 1 |
cochlear inner hair cell | 1.05e-08 | 1 |
neural cell | 6.33e-08 | 43 |
ectodermal cell | 9.84e-08 | 44 |
neurectodermal cell | 9.84e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.42e-18 | 4 |
regional part of metencephalon | 7.42e-18 | 4 |
metencephalon | 7.42e-18 | 4 |
future metencephalon | 7.42e-18 | 4 |
rhombic lip | 7.42e-18 | 4 |
segmental subdivision of hindbrain | 4.10e-12 | 6 |
segmental subdivision of nervous system | 4.10e-12 | 6 |
hindbrain | 4.10e-12 | 6 |
presumptive hindbrain | 4.10e-12 | 6 |
Ammon's horn | 4.65e-10 | 7 |
lobe parts of cerebral cortex | 4.65e-10 | 7 |
hippocampal formation | 4.65e-10 | 7 |
limbic system | 4.65e-10 | 7 |
limbic lobe | 4.65e-10 | 7 |
regional part of brain | 1.09e-09 | 46 |
brain | 1.81e-09 | 47 |
future brain | 1.81e-09 | 47 |
central nervous system | 2.74e-09 | 73 |
ecto-epithelium | 2.87e-09 | 73 |
nervous system | 5.14e-09 | 75 |
neurectoderm | 1.34e-08 | 64 |
neural plate | 1.34e-08 | 64 |
presumptive neural plate | 1.34e-08 | 64 |
neural tube | 1.71e-08 | 52 |
neural rod | 1.71e-08 | 52 |
future spinal cord | 1.71e-08 | 52 |
neural keel | 1.71e-08 | 52 |
ectoderm-derived structure | 1.72e-08 | 95 |
ectoderm | 1.72e-08 | 95 |
presumptive ectoderm | 1.72e-08 | 95 |
regional part of nervous system | 3.74e-08 | 54 |
structure with developmental contribution from neural crest | 3.76e-07 | 92 |