FFCP PHASE1:Hg19::chr5:86708789..86708805,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:86708789..86708805,-
|short_description=p5@CCNH
|description=CAGE_peak_5_at_CCNH_5end
|association_with_transcript=30bp_to_ENST00000256897,uc003kjb.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=902 | |EntrezGene=902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1594 | |HGNC=1594 | ||
|TSSclassifier=strong | |||
|UniProt=P51946 | |UniProt=P51946 | ||
|association_with_transcript=30bp_to_ENST00000256897,uc003kjb.2_5end | |||
|cluster_id=chr5:86708789..86708805,- | |||
|description=CAGE_peak_5_at_CCNH_5end | |||
|id=chr5:86708789..86708805,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.38e-08;33!CL:0002057;2.38e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.32e-07,42;CL:0002057,3.32e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.57e-13!86;UBERON:0001049!8.31e-13!57;UBERON:0005068!8.31e-13!57;UBERON:0006241!8.31e-13!57;UBERON:0007135!8.31e-13!57;UBERON:0001017!2.47e-12!82;UBERON:0003080!7.21e-12!42;UBERON:0001893!1.32e-11!34;UBERON:0002780!2.02e-11!41;UBERON:0001890!2.02e-11!41;UBERON:0006240!2.02e-11!41;UBERON:0002020!2.24e-11!34;UBERON:0003528!2.24e-11!34;UBERON:0002791!3.66e-11!33;UBERON:0002616!5.03e-11!59;UBERON:0001869!6.20e-11!32;UBERON:0000955!7.71e-11!69;UBERON:0006238!7.71e-11!69;UBERON:0000073!1.82e-10!94;UBERON:0001016!1.82e-10!94;UBERON:0003075!8.42e-09!86;UBERON:0007284!8.42e-09!86;UBERON:0000956!1.44e-08!25;UBERON:0000203!1.44e-08!25;UBERON:0002346!1.62e-08!90;UBERON:0003056!2.35e-08!61;UBERON:0002619!3.84e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.38e-10;34!UBERON:0002791;1.54e-10;32!UBERON:0003528;2.17e-10;34!UBERON:0002020;2.17e-10;34!UBERON:0001869;2.50e-10;32!UBERON:0000956;7.63e-10;25!UBERON:0000203;7.63e-10;25!UBERON:0002780;4.04e-09;41!UBERON:0001890;4.04e-09;41!UBERON:0000073;1.60e-08;53!UBERON:0002616;1.60e-08;53!UBERON:0002619;6.27e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.08e-14,56;UBERON:0005068,1.08e-14,56;UBERON:0006241,1.08e-14,56;UBERON:0007135,1.08e-14,56;UBERON:0001017,4.08e-14,81;UBERON:0000073,4.60e-14,53;UBERON:0002616,4.60e-14,53;UBERON:0001893,1.58e-13,34;UBERON:0003528,3.28e-13,34;UBERON:0002020,3.28e-13,34;UBERON:0002780,3.60e-13,41;UBERON:0001890,3.60e-13,41;UBERON:0003080,3.60e-13,41;UBERON:0006240,3.60e-13,41;UBERON:0001869,1.67e-12,32;UBERON:0002791,1.82e-12,32;UBERON:0000955,1.08e-11,68;UBERON:0006238,1.08e-11,68;UBERON:0001016,3.20e-11,89;UBERON:0000956,1.58e-10,25;UBERON:0000203,1.58e-10,25;UBERON:0003075,2.49e-10,82;UBERON:0007284,2.49e-10,82;UBERON:0002346,5.49e-10,86;UBERON:0003056,1.43e-09,61;UBERON:0002619,2.11e-08,22;UBERON:0007023,3.45e-07,114;UBERON:0001950,5.68e-07,20 | |||
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| ||
|short_description=p5@CCNH | |||
}} | }} |
Latest revision as of 02:31, 19 September 2015
Short description: | p5@CCNH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCNH_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000256897, uc003kjb.2_5end |
EntrezGene: | CCNH |
HGNC: | 1594 |
UniProt: | P51946 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.32e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.32e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.08e-14 | 56 |
neural rod | 1.08e-14 | 56 |
future spinal cord | 1.08e-14 | 56 |
neural keel | 1.08e-14 | 56 |
central nervous system | 4.08e-14 | 81 |
regional part of nervous system | 4.60e-14 | 53 |
regional part of brain | 4.60e-14 | 53 |
telencephalon | 1.58e-13 | 34 |
brain grey matter | 3.28e-13 | 34 |
gray matter | 3.28e-13 | 34 |
regional part of forebrain | 3.60e-13 | 41 |
forebrain | 3.60e-13 | 41 |
anterior neural tube | 3.60e-13 | 41 |
future forebrain | 3.60e-13 | 41 |
cerebral hemisphere | 1.67e-12 | 32 |
regional part of telencephalon | 1.82e-12 | 32 |
brain | 1.08e-11 | 68 |
future brain | 1.08e-11 | 68 |
nervous system | 3.20e-11 | 89 |
cerebral cortex | 1.58e-10 | 25 |
pallium | 1.58e-10 | 25 |
neural plate | 2.49e-10 | 82 |
presumptive neural plate | 2.49e-10 | 82 |
neurectoderm | 5.49e-10 | 86 |
pre-chordal neural plate | 1.43e-09 | 61 |
regional part of cerebral cortex | 2.11e-08 | 22 |
adult organism | 3.45e-07 | 114 |
neocortex | 5.68e-07 | 20 |