FFCP PHASE1:Hg19::chr6:110012364..110012379,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:110012364..110012379,-
|short_description=p2@AKD1
|description=CAGE_peak_2_at_AKD1_5end
|association_with_transcript=0bp_to_uc003pts.1_5end
|EntrezGene=22...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221264 | |EntrezGene=221264 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33814 | |HGNC=33814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003pts.1_5end | |||
|cluster_id=chr6:110012364..110012379,- | |||
|description=CAGE_peak_2_at_AKD1_5end | |||
|id=chr6:110012364..110012379,- | |||
|ontology_enrichment_celltype=CL:0000838!2.08e-11!52;CL:0000542!4.56e-11!53;CL:0000051!4.56e-11!53;CL:0000791!1.50e-07!18;CL:0000789!1.50e-07!18;CL:0002420!1.50e-07!18;CL:0002419!1.50e-07!18;CL:0000790!1.50e-07!18;CL:0000236!4.22e-07!14;CL:0000738!5.20e-07!140;CL:0000084!7.68e-07!25;CL:0000827!7.68e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.17e-09;13!CL:0000791;6.37e-09;18!CL:0000789;6.37e-09;18!CL:0002419;6.37e-09;18!CL:0000542;3.47e-07;53!CL:0000625;4.33e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.10e-10,52;CL:0000542,2.66e-10,53;CL:0000051,2.66e-10,53;CL:0000791,2.95e-09,18;CL:0000789,2.95e-09,18;CL:0002420,2.95e-09,18;CL:0002419,2.95e-09,18;CL:0000790,2.95e-09,18;CL:0000236,1.66e-08,14;CL:0000625,2.03e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.37e-09;18!CL:0000051;3.47e-07;53!UBERON:0006601;5.11e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.27e-24!115;UBERON:0001049!2.02e-13!57;UBERON:0005068!2.02e-13!57;UBERON:0006241!2.02e-13!57;UBERON:0007135!2.02e-13!57;UBERON:0002616!3.59e-10!59;UBERON:0000073!5.45e-10!94;UBERON:0001016!5.45e-10!94;UBERON:0003080!5.84e-10!42;UBERON:0001893!6.41e-10!34;UBERON:0002020!9.53e-10!34;UBERON:0003528!9.53e-10!34;UBERON:0002791!1.54e-09!33;UBERON:0002780!1.82e-09!41;UBERON:0001890!1.82e-09!41;UBERON:0006240!1.82e-09!41;UBERON:0001017!2.76e-09!82;UBERON:0005743!2.96e-09!86;UBERON:0000955!4.38e-09!69;UBERON:0006238!4.38e-09!69;UBERON:0001869!6.61e-09!32;UBERON:0001950!3.40e-08!20;UBERON:0002619!1.09e-07!22;UBERON:0003075!1.91e-07!86;UBERON:0007284!1.91e-07!86;UBERON:0000956!2.87e-07!25;UBERON:0000203!2.87e-07!25;UBERON:0002346!3.80e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.04e-11;53!UBERON:0002616;1.04e-11;53!UBERON:0003528;1.24e-11;34!UBERON:0002020;1.24e-11;34!UBERON:0001893;1.45e-11;34!UBERON:0001950;1.56e-11;20!UBERON:0002619;3.01e-11;22!UBERON:0002791;5.08e-11;32!UBERON:0001869;6.16e-11;32!UBERON:0002780;6.34e-11;41!UBERON:0001890;6.34e-11;41!UBERON:0000956;2.87e-09;25!UBERON:0000203;2.87e-09;25!UBERON:0007023;2.21e-08;114!UBERON:0001016;6.45e-08;83!UBERON:0001017;4.42e-07;75!UBERON:0004732;8.65e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.44e-30,114;UBERON:0001049,5.94e-22,56;UBERON:0005068,5.94e-22,56;UBERON:0006241,5.94e-22,56;UBERON:0007135,5.94e-22,56;UBERON:0000073,7.00e-20,53;UBERON:0002616,7.00e-20,53;UBERON:0001016,1.86e-15,89;UBERON:0002780,3.49e-15,41;UBERON:0001890,3.49e-15,41;UBERON:0003080,3.49e-15,41;UBERON:0006240,3.49e-15,41;UBERON:0003075,1.19e-14,82;UBERON:0007284,1.19e-14,82;UBERON:0000955,2.41e-14,68;UBERON:0006238,2.41e-14,68;UBERON:0001893,3.20e-14,34;UBERON:0001017,4.12e-14,81;UBERON:0003528,6.02e-14,34;UBERON:0002020,6.02e-14,34;UBERON:0002346,2.74e-13,86;UBERON:0002791,8.84e-13,32;UBERON:0001869,1.39e-12,32;UBERON:0001950,1.72e-11,20;UBERON:0002619,2.40e-11,22;UBERON:0003056,1.89e-09,61;UBERON:0000956,2.36e-09,25;UBERON:0000203,2.36e-09,25;UBERON:0010371,2.64e-09,104;UBERON:0003076,4.24e-08,15;UBERON:0003057,4.24e-08,15;UBERON:0011216,1.50e-07,223;UBERON:0004732,6.89e-07,13 | |||
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|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.893922188854576,0,2.53299878168311,0.631719873426831,0,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.273748850145768,0.376627918784408,0.229240217243854,0.410502947249729,0.314843125254717,1.18009283054671,0.767658796194425,1.39334510984468,0,0,0,0.697204805222715,2.70121541726101,0.880801318004542,0,0.401088894940283,0.434021741431704,0.895661896959697,2.59114932815184,0.77272670290256,0.145398238779565,0.377875943688809,0.970336244751265,0.464858073811369,0,0,0.575384784644301,1.7931249457037,1.18241114944293,1.72372840368309,0,0,0.564727018627814,0.545812300115692,0,0,0.641858054152187,0,0.659702600373432,0.598390972864896,0.426224750532694,0.870627715885752,0,0,0.75374599577023,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0.211255286311942,0.637812899895131,0,1.12328631146495,1.05123824989054,0.964353520182481,1.14005097496499,0.79566670879636,0.547992461293902,7.03984977845291,4.91524750135918,5.33705552318133,2.98711155796555,3.60356388332411,5.17277195959035,3.30522436392431,8.58648379081828,2.27685187643779,1.17447437874188,1.14681968437569,1.32171328579026,0,1.05353633910031,2.360517241366,0.393010762749165,1.23360899399706,1.5046784585161,2.93330039970231,0.946895611469467,0,1.22551502573691,2.3568472597987,1.99380505125259,1.89562704635511,0.512365278902701,0.780356085359269,0.493313713811028,0.276350017785848,0.579606171470105,3.11401782640327,3.21048993707656,4.18142095219907,0.453237370790265,1.53288197440768,1.71813722741315,3.54227568827304,2.54852331459277,1.95325036156926,3.8018081777935,2.55977702432214,4.22355816809581,2.49861453104692,2.36777252044017,3.28451198768419,1.61285394579786,0.802320587350522,0.868946423296794,0,0,0.511450247374121,0.722878304769133,1.00267582127178,0,3.1811437882044,0.486634870302636,0.756278537312543,0,0.263504357079378,3.53643503843824,0.364295288292542,0,0.324547393654683,0.174129737299267,0.132957960518865,1.19245312152671,1.14398982156026,1.11437250398869,0.993812036833525,0,0.694281003215189,0,0.419499436209906,0,0,0.516833518338658,0.71153252537342,2.34304428935269,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.926864265692532,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.605429710579726,0,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0.561803226808994,0.61246251376468,0.122834317311768,0.619954687054593,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0.300476117813194,0.226864366320042,0.358779271377724,0.640672166455702,0.847727604638247,0.300091096084402,0.721367704669072,1.28820270022815,0.744467425326359,0.168776332241266,0.292311015483596,0.252433774244115,0.644349290496095,0.484938170456436,1.42003837006646,0.201504196455281,0.339121184620975,0,0.545492241181669,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0,0.196221465125346,0,0.738155454624648,0,0,0,2.53510069643662,0.982827216677626,1.77236972004421,3.5317047953172,0.614942192715568,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0.433099343283221,0,0.380508304469197,1.58040879591855,1.71697232418975,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0,3.94130590316755,1.23267807618516,1.24396869324463,2.59415916150531,1.51490920111656,0.317489471460845,1.14596527667483,0,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0.224262168690721,0.43596006883328,0.22001485746285,0.646358578788889,0,0,0.797814349754612,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0.144781306667579,1.02738161275192,0,0.112085143993527,1.18218456121156,1.07813787429759,1.54011643535698,0.254094624222463,2.60279707715243,0,0.670065061337395,0.637938751653163,0.749007023947182,2.99161459204025,0.414415513436035,0.49076596687656,0,0.813795071099207,0.207970861530807,0,0.157702415033935,0.117141414992713,0.902838299183157,0,0,0.664225598535437,0,0.173767228936166,0.391602314925481,0.343143423810856,1.6541442089831,1.94142780736755,0.640365346820666,0.909382714338778,0,0,0,0.460385919864187,0,0.512556597022804,0,0.482561763430822,0,0,0,0.246381468041427,0,0,1.32945394550784,0,0.368323955743585,0.229628896329213,0.182091168006717,0.131124414959424,0.902399225814824,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0.877039506583738,0,0.256450125116389,0,1.95227036798582,1.54561517471583,0.183138929636687,0.82509499920588,0,0,0,0.48335359146061,0.154048617114644,0,0,0.322260734604821,0.145016693914229,0.0852266274161009,0.623224249527161,0,0.192190067365106,0.893288987462089,0.50578890427775,0,0.62962469366128,0,0,0,0,0,0.1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| ||
|short_description=p2@AKD1 | |||
}} | }} |
Latest revision as of 18:59, 19 September 2015
Short description: | p2@AKD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AKD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003pts.1_5end |
EntrezGene: | AKD1 |
HGNC: | 33814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.10e-10 | 52 |
lymphocyte | 2.66e-10 | 53 |
common lymphoid progenitor | 2.66e-10 | 53 |
mature alpha-beta T cell | 2.95e-09 | 18 |
alpha-beta T cell | 2.95e-09 | 18 |
immature T cell | 2.95e-09 | 18 |
mature T cell | 2.95e-09 | 18 |
immature alpha-beta T cell | 2.95e-09 | 18 |
B cell | 1.66e-08 | 14 |
CD8-positive, alpha-beta T cell | 2.03e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.44e-30 | 114 |
neural tube | 5.94e-22 | 56 |
neural rod | 5.94e-22 | 56 |
future spinal cord | 5.94e-22 | 56 |
neural keel | 5.94e-22 | 56 |
regional part of nervous system | 7.00e-20 | 53 |
regional part of brain | 7.00e-20 | 53 |
nervous system | 1.86e-15 | 89 |
regional part of forebrain | 3.49e-15 | 41 |
forebrain | 3.49e-15 | 41 |
anterior neural tube | 3.49e-15 | 41 |
future forebrain | 3.49e-15 | 41 |
neural plate | 1.19e-14 | 82 |
presumptive neural plate | 1.19e-14 | 82 |
brain | 2.41e-14 | 68 |
future brain | 2.41e-14 | 68 |
telencephalon | 3.20e-14 | 34 |
central nervous system | 4.12e-14 | 81 |
brain grey matter | 6.02e-14 | 34 |
gray matter | 6.02e-14 | 34 |
neurectoderm | 2.74e-13 | 86 |
regional part of telencephalon | 8.84e-13 | 32 |
cerebral hemisphere | 1.39e-12 | 32 |
neocortex | 1.72e-11 | 20 |
regional part of cerebral cortex | 2.40e-11 | 22 |
pre-chordal neural plate | 1.89e-09 | 61 |
cerebral cortex | 2.36e-09 | 25 |
pallium | 2.36e-09 | 25 |
ecto-epithelium | 2.64e-09 | 104 |
posterior neural tube | 4.24e-08 | 15 |
chordal neural plate | 4.24e-08 | 15 |
organ system subdivision | 1.50e-07 | 223 |
segmental subdivision of nervous system | 6.89e-07 | 13 |