FFCP PHASE1:Hg19::chr10:88428165..88428171,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15710 | |||
|TSSclassifier=strong | |||
|UniProt=B4E3K3 | |||
|association_with_transcript=-34bp_to_ENST00000352360,ENST00000429277,ENST00000458213,NM_001171610_5end | |||
|cluster_id=chr10:88428165..88428171,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_LDB3_5end | |||
|id=chr10:88428165..88428171,+ | |||
|ontology_enrichment_celltype=CL:0002575!4.85e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.57e-16;4!UBERON:0007284;5.57e-16;4!UBERON:0006603;5.69e-10;65!UBERON:0010226;2.90e-08;1!UBERON:0004140;3.34e-08;1!UBERON:0000358;3.58e-08;1!UBERON:0004874;4.40e-08;1!UBERON:0006298;5.79e-08;1!UBERON:0009143;8.69e-08;1!UBERON:0010227;9.61e-08;1!UBERON:0003104;3.19e-07;31 | |||
|ontology_enrichment_disease=DOID:114!4.63e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;4.26e-15;2!DOID:178;2.71e-08;1!DOID:326;2.71e-08;1!DOID:3978;2.71e-08;1!DOID:3394;2.71e-08;1!DOID:5844;2.71e-08;1!DOID:1287;5.60e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.26e-15,2;DOID:178,2.71e-08,1;DOID:326,2.71e-08,1;DOID:3978,2.71e-08,1;DOID:3394,2.71e-08,1;DOID:5844,2.71e-08,1;DOID:1287,5.60e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-24!115;UBERON:0003103!4.34e-12!69;UBERON:0003978!6.00e-11!3;UBERON:0009751!6.00e-11!3;UBERON:0000946!6.00e-11!3;UBERON:0002523!6.00e-11!3;UBERON:0005983!6.00e-11!3;UBERON:0002165!6.00e-11!3;UBERON:0002062!6.00e-11!3;UBERON:0007280!6.00e-11!3;UBERON:0004151!1.08e-10!3;UBERON:0007100!1.60e-10!27;UBERON:0001630!5.29e-08!2;UBERON:0005090!5.29e-08!2;UBERON:0000341!7.14e-08!2;UBERON:0002133!9.59e-08!2;UBERON:0002081!1.46e-07!2;UBERON:0003127!2.52e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;4.14e-21;3!UBERON:0000946;4.14e-21;3!UBERON:0007100;8.96e-21;25!UBERON:0004151;1.35e-20;3!UBERON:0005090;5.62e-15;2!UBERON:0001630;5.62e-15;2!UBERON:0000341;1.12e-14;2!UBERON:0002133;1.93e-14;2!UBERON:0002081;4.47e-14;2!UBERON:0000948;1.39e-10;22!UBERON:0001723;3.82e-10;3!UBERON:0001033;3.82e-10;3!UBERON:0002426;1.90e-08;1!UBERON:0003831;1.90e-08;1!UBERON:0003898;1.90e-08;1!UBERON:0004830;1.90e-08;1!UBERON:0003830;1.90e-08;1!UBERON:0005175;1.90e-08;1!UBERON:0001774;1.90e-08;1!UBERON:0001103;1.90e-08;1!UBERON:0002146;2.04e-08;1!UBERON:0005623;2.04e-08;1!UBERON:0002084;2.90e-08;1!UBERON:0002082;2.90e-08;1!UBERON:0001389;3.11e-08;1!UBERON:0000026;3.11e-08;1!UBERON:0008784;3.11e-08;1!UBERON:0006058;3.11e-08;1!UBERON:0003663;3.11e-08;1!UBERON:0004256;3.11e-08;1!UBERON:0004708;3.11e-08;1!UBERON:0002101;3.11e-08;1!UBERON:0004709;3.11e-08;1!UBERON:0002529;3.11e-08;1!UBERON:0010538;3.11e-08;1!UBERON:0003661;3.11e-08;1!UBERON:0010890;3.11e-08;1!UBERON:0002471;3.11e-08;1!UBERON:0001383;3.11e-08;1!UBERON:0010758;3.11e-08;1!UBERON:0010707;3.11e-08;1!UBERON:0000978;3.11e-08;1!UBERON:0002103;3.11e-08;1!UBERON:0001665;3.11e-08;1!UBERON:0003823;3.11e-08;1!UBERON:0000154;3.11e-08;1!UBERON:0010709;3.11e-08;1!UBERON:0002135;4.11e-08;1!UBERON:0000989;4.40e-08;1!UBERON:0008811;4.40e-08;1!UBERON:0002134;5.05e-08;1!UBERON:0005208;5.05e-08;1!UBERON:0004145;5.05e-08;1!UBERON:0005946;5.05e-08;1!UBERON:0005965;5.05e-08;1!UBERON:0002078;5.05e-08;1!UBERON:0001736;5.79e-08;1!UBERON:0007029;6.19e-08;1!UBERON:0002372;7.09e-08;1!UBERON:0001961;7.09e-08;1!UBERON:0001744;7.09e-08;1!UBERON:0001042;7.09e-08;1!UBERON:0001735;7.09e-08;1!UBERON:0002079;9.61e-08;1!UBERON:0001301;1.14e-07;1!UBERON:0001134;4.84e-07;16!UBERON:0002036;4.84e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.14e-21,3;UBERON:0009751,4.14e-21,3;UBERON:0000946,4.14e-21,3;UBERON:0002523,4.14e-21,3;UBERON:0005983,4.14e-21,3;UBERON:0002165,4.14e-21,3;UBERON:0002062,4.14e-21,3;UBERON:0007280,4.14e-21,3;UBERON:0004151,1.40e-20,3;UBERON:0007100,4.00e-19,27;UBERON:0007023,1.52e-15,114;UBERON:0005090,5.62e-15,2;UBERON:0001630,5.62e-15,2;UBERON:0000341,1.04e-14,2;UBERON:0002133,1.93e-14,2;UBERON:0003103,2.35e-14,68;UBERON:0002081,4.62e-14,2;UBERON:0010227,4.62e-14,2;UBERON:0001723,3.82e-10,3;UBERON:0001033,3.82e-10,3;UBERON:0010056,3.82e-10,3;UBERON:0000948,1.18e-09,24;UBERON:0005498,1.18e-09,24;UBERON:0004140,1.18e-09,24;UBERON:0009881,1.18e-09,24;UBERON:0004141,1.18e-09,24;UBERON:0003084,1.18e-09,24;UBERON:0007005,1.18e-09,24;UBERON:0004139,1.18e-09,24;UBERON:0004291,1.18e-09,24;UBERON:0004797,2.38e-09,7;UBERON:0002426,1.91e-08,1;UBERON:0003831,1.91e-08,1;UBERON:0003898,1.91e-08,1;UBERON:0004830,1.91e-08,1;UBERON:0003830,1.91e-08,1;UBERON:0005175,1.91e-08,1;UBERON:0001774,1.91e-08,1;UBERON:0001103,1.91e-08,1;UBERON:0010084,1.91e-08,1;UBERON:0002146,2.04e-08,1;UBERON:0005623,2.04e-08,1;UBERON:0002084,2.90e-08,1;UBERON:0002082,2.90e-08,1;UBERON:0010226,2.90e-08,1;UBERON:0005418,3.11e-08,1;UBERON:0001389,3.11e-08,1;UBERON:0000026,3.11e-08,1;UBERON:0008784,3.11e-08,1;UBERON:0006058,3.11e-08,1;UBERON:0003663,3.11e-08,1;UBERON:0004256,3.11e-08,1;UBERON:0004708,3.11e-08,1;UBERON:0002101,3.11e-08,1;UBERON:0004709,3.11e-08,1;UBERON:0002529,3.11e-08,1;UBERON:0010538,3.11e-08,1;UBERON:0003661,3.11e-08,1;UBERON:0010890,3.11e-08,1;UBERON:0002471,3.11e-08,1;UBERON:0001383,3.11e-08,1;UBERON:0004357,3.11e-08,1;UBERON:0004347,3.11e-08,1;UBERON:0005420,3.11e-08,1;UBERON:0005732,3.11e-08,1;UBERON:0010758,3.11e-08,1;UBERON:0010707,3.11e-08,1;UBERON:0000978,3.11e-08,1;UBERON:0002103,3.11e-08,1;UBERON:0001665,3.11e-08,1;UBERON:0003823,3.11e-08,1;UBERON:0000154,3.11e-08,1;UBERON:0010709,3.11e-08,1;UBERON:0005733,3.11e-08,1;UBERON:0005730,3.11e-08,1;UBERON:0002135,4.11e-08,1;UBERON:0000989,4.40e-08,1;UBERON:0008811,4.40e-08,1;UBERON:0006258,4.40e-08,1;UBERON:0005876,4.40e-08,1;UBERON:0004874,4.40e-08,1;UBERON:0002134,5.05e-08,1;UBERON:0005208,5.05e-08,1;UBERON:0005946,5.05e-08,1;UBERON:0005965,5.05e-08,1;UBERON:0002078,5.05e-08,1;UBERON:0001736,5.79e-08,1;UBERON:0006298,5.79e-08,1;UBERON:0007029,6.19e-08,1;UBERON:0002372,7.10e-08,1;UBERON:0001961,7.10e-08,1;UBERON:0001744,7.10e-08,1;UBERON:0001735,7.10e-08,1;UBERON:0002079,9.94e-08,1;UBERON:0001301,1.14e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,130.820156509703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0.0967563312890851,0,0.0821154570532092,3.10364852762942,0,4.29363407483012,0,0.19871461170299,0,0.195551382734803,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,33.5138881526705,118.934260062064,9.33234931949858,67.890860169657,175.124227639721,163.138335390009,45.416027401027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,2.1440859791201,53.6294495996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,26.2991924546326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,52.4417358122195,101.020201946547,5.799072156691,7.28566489588709,0,0,0,0,0,0.150962843566674,0.231522474323834,0.218559560503957,0.470317296361523,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,8.71585638468627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,75.9112975567492,9.52257725854961,0,0.0620747142958579,0,0.381882949668989,5.05292972395548,35.2701131593077,68.1044269159709,5.72492450623994,0.215166616178029,9.31448998328838,0,0,0,0,39.8889602085872,0.122241444182866,0,0,2.41528552309231,0 | |||
|short_description=p3@LDB3 | |||
}} |
Latest revision as of 17:33, 19 September 2015
Short description: | p3@LDB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LDB3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -34bp_to_ENST00000352360, ENST00000429277, ENST00000458213, NM_001171610_5end |
EntrezGene: | LDB3 |
HGNC: | 15710 |
UniProt: | B4E3K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 4.26e-15 | 2 |
vascular disease | 2.71e-08 | 1 |
ischemia | 2.71e-08 | 1 |
extrinsic cardiomyopathy | 2.71e-08 | 1 |