FFCP PHASE1:Hg19::chr11:131779544..131779557,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-33bp_to_ENST00000463395_5end | |||
|cluster_id=chr11:131779544..131779557,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_21_at_NTM_5end | |||
|id=chr11:131779544..131779557,+ | |||
|ontology_enrichment_celltype=CL:0002582!2.58e-07!3;CL:0000064!3.15e-07!3;CL:0005012!3.15e-07!3;CL:0000067!3.15e-07!3;CL:0002304!3.15e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000222;9.79e-26;1!CL:0000306;1.92e-07;4!CL:0002222;1.92e-07;4!CL:0002224;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.04e-07,4;CL:0002222,2.04e-07,4;CL:0002224,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.35e-75;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.53e-26!57;UBERON:0005068!1.53e-26!57;UBERON:0006241!1.53e-26!57;UBERON:0007135!1.53e-26!57;UBERON:0000955!2.11e-25!69;UBERON:0006238!2.11e-25!69;UBERON:0002616!2.28e-25!59;UBERON:0002346!6.71e-25!90;UBERON:0003075!6.73e-25!86;UBERON:0007284!6.73e-25!86;UBERON:0001017!2.07e-21!82;UBERON:0005743!2.27e-21!86;UBERON:0000073!3.23e-21!94;UBERON:0001016!3.23e-21!94;UBERON:0000033!3.77e-20!123;UBERON:0003056!5.46e-20!61;UBERON:0002020!2.68e-19!34;UBERON:0003528!2.68e-19!34;UBERON:0002780!3.13e-19!41;UBERON:0001890!3.13e-19!41;UBERON:0006240!3.13e-19!41;UBERON:0001893!3.18e-19!34;UBERON:0000153!1.05e-18!129;UBERON:0007811!1.05e-18!129;UBERON:0003080!1.21e-18!42;UBERON:0001869!1.26e-18!32;UBERON:0002791!7.67e-18!33;UBERON:0007023!3.42e-16!115;UBERON:0002619!6.86e-15!22;UBERON:0000956!8.26e-15!25;UBERON:0000203!8.26e-15!25;UBERON:0001950!3.01e-14!20;UBERON:0000924!1.46e-13!173;UBERON:0006601!1.46e-13!173;UBERON:0004121!2.87e-13!169;UBERON:0004733!8.52e-12!12;UBERON:0002028!8.52e-12!12;UBERON:0007277!8.52e-12!12;UBERON:0004732!9.15e-11!13;UBERON:0000200!9.96e-10!6;UBERON:0002680!2.10e-09!9;UBERON:0001895!2.10e-09!9;UBERON:0010092!2.10e-09!9;UBERON:0003076!4.06e-09!15;UBERON:0003057!4.06e-09!15;UBERON:0000475!1.87e-07!365;UBERON:0000988!2.31e-07!3;UBERON:0000025!2.51e-07!194;UBERON:0001778!3.15e-07!3;UBERON:0001775!3.15e-07!3;UBERON:0000119!3.75e-07!312;UBERON:0002298!6.14e-07!8;UBERON:0000483!7.40e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.22e-38;6!UBERON:0002680;1.22e-25;9!UBERON:0001895;1.22e-25;9!UBERON:0004733;1.93e-19;12!UBERON:0002028;1.93e-19;12!UBERON:0004732;5.26e-18;13!UBERON:0010077;1.92e-07;4!UBERON:0005389;1.92e-07;4!UBERON:0000484;1.92e-07;4!UBERON:0000965;1.92e-07;4!UBERON:0001803;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.56e-38,6;UBERON:0006215,5.56e-38,6;UBERON:0002680,1.27e-25,9;UBERON:0001895,1.27e-25,9;UBERON:0010092,1.27e-25,9;UBERON:0004733,2.00e-19,12;UBERON:0002028,2.00e-19,12;UBERON:0007277,2.00e-19,12;UBERON:0004732,5.41e-18,13;UBERON:0003076,1.07e-15,15;UBERON:0003057,1.07e-15,15;UBERON:0000073,8.31e-08,53;UBERON:0002616,8.31e-08,53;UBERON:0003075,1.06e-07,82;UBERON:0007284,1.06e-07,82;UBERON:0010077,2.04e-07,4;UBERON:0005389,2.04e-07,4;UBERON:0000484,2.04e-07,4;UBERON:0002546,2.04e-07,4;UBERON:0000965,2.04e-07,4;UBERON:0001803,2.04e-07,4;UBERON:0003073,2.04e-07,4;UBERON:0005426,2.04e-07,4;UBERON:0001049,2.05e-07,56;UBERON:0005068,2.05e-07,56;UBERON:0006241,2.05e-07,56;UBERON:0007135,2.05e-07,56;UBERON:0002346,2.36e-07,86;UBERON:0010314,8.63e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,2.0911118104818,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,3.11664374064136,0,0,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,3.05163472634166,9.06749931436042,4.43321428430321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.548167698587004,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.500763722825999,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.638535436228605,0.615349092722265,0,0.691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.19024743058172,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.815636795721981,0.197318320688547,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0.829169439458779,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@NTM | |||
}} |
Latest revision as of 19:00, 16 September 2015
Short description: | p21@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_NTM_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -33bp_to_ENST00000463395_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.04e-07 | 4 |
vertebrate lens cell | 2.04e-07 | 4 |
lens epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.56e-38 | 6 |
rhombic lip | 5.56e-38 | 6 |
regional part of metencephalon | 1.27e-25 | 9 |
metencephalon | 1.27e-25 | 9 |
future metencephalon | 1.27e-25 | 9 |
segmental subdivision of hindbrain | 2.00e-19 | 12 |
hindbrain | 2.00e-19 | 12 |
presumptive hindbrain | 2.00e-19 | 12 |
segmental subdivision of nervous system | 5.41e-18 | 13 |
posterior neural tube | 1.07e-15 | 15 |
chordal neural plate | 1.07e-15 | 15 |
regional part of nervous system | 8.31e-08 | 53 |
regional part of brain | 8.31e-08 | 53 |
neural plate | 1.06e-07 | 82 |
presumptive neural plate | 1.06e-07 | 82 |
cuboidal epithelium | 2.04e-07 | 4 |
transparent eye structure | 2.04e-07 | 4 |
simple cuboidal epithelium | 2.04e-07 | 4 |
cranial placode | 2.04e-07 | 4 |
lens of camera-type eye | 2.04e-07 | 4 |
epithelium of lens | 2.04e-07 | 4 |
lens placode | 2.04e-07 | 4 |
lens vesicle | 2.04e-07 | 4 |
neural tube | 2.05e-07 | 56 |
neural rod | 2.05e-07 | 56 |
future spinal cord | 2.05e-07 | 56 |
neural keel | 2.05e-07 | 56 |
neurectoderm | 2.36e-07 | 86 |
structure with developmental contribution from neural crest | 8.63e-07 | 132 |